RNA–Protein interactions for RNA: ENST00000559433.5

LRRC28-214, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 1,045 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-214ENST00000559433 ZAP70P43403 619 aa15.4■□□□□ 0.06
LRRC28-214ENST00000559433 KIF1BPQ96EK5 621 aa15.4■□□□□ 0.06
LRRC28-214ENST00000559433 FOCADQ5VW36 1801 aa15.4■□□□□ 0.06
LRRC28-214ENST00000559433 WDHD1O75717 1129 aaPredicted RBP15.39■□□□□ 0.05
LRRC28-214ENST00000559433 CYP2E1P05181 493 aaPredicted RBP15.39■□□□□ 0.05
LRRC28-214ENST00000559433 PICALMQ13492 652 aa15.39■□□□□ 0.05
LRRC28-214ENST00000559433 NAA16Q6N069 864 aaPredicted RBP15.39■□□□□ 0.05
LRRC28-214ENST00000559433 ZSCAN29Q8IWY8 852 aaPredicted RBP15.39■□□□□ 0.05
LRRC28-214ENST00000559433 ZFPM1Q8IX07 1006 aa15.39■□□□□ 0.05
LRRC28-214ENST00000559433 CLASRPQ8N2M8 674 aaKnown RBP15.39■□□□□ 0.05
LRRC28-214ENST00000559433 NOL10Q9BSC4 688 aaKnown RBP15.39■□□□□ 0.05
LRRC28-214ENST00000559433 MCOLN1Q9GZU1 580 aa15.39■□□□□ 0.05
LRRC28-214ENST00000559433 BCL11AQ9H165 835 aa15.39■□□□□ 0.05
LRRC28-214ENST00000559433 SNCAIPQ9Y6H5 919 aa15.39■□□□□ 0.05
LRRC28-214ENST00000559433 RAB11FIP3O75154 756 aa15.38■□□□□ 0.05
LRRC28-214ENST00000559433 RHBDL3P58872 404 aa15.38■□□□□ 0.05
LRRC28-214ENST00000559433 IFNL1Q8IU54 200 aa15.38■□□□□ 0.05
LRRC28-214ENST00000559433 ZKSCAN4Q969J2 545 aaPredicted RBP15.38■□□□□ 0.05
LRRC28-214ENST00000559433 OTUD5Q96G74 571 aa15.38■□□□□ 0.05
LRRC28-214ENST00000559433 DDX4Q9NQI0 724 aaKnown RBP15.38■□□□□ 0.05
LRRC28-214ENST00000559433 PIH1D3Q9NQM4 214 aaKnown RBP15.38■□□□□ 0.05
LRRC28-214ENST00000559433 IFIT2P09913 472 aaKnown RBP15.37■□□□□ 0.05
LRRC28-214ENST00000559433 GTF2A2P52657 109 aa15.37■□□□□ 0.05
LRRC28-214ENST00000559433 NDUFB9Q9Y6M9 179 aa15.37■□□□□ 0.05
LRRC28-214ENST00000559433 DOCK1Q14185 1865 aa15.37■□□□□ 0.05
LRRC28-214ENST00000559433 SPDYE5A6NIY4 337 aa15.36■□□□□ 0.05
LRRC28-214ENST00000559433 GPR25O00155 361 aa15.36■□□□□ 0.05
LRRC28-214ENST00000559433 IGF2BP3O00425 579 aaKnown RBP eCLIP15.36■□□□□ 0.05
LRRC28-214ENST00000559433 IDH1O75874 414 aaKnown RBP15.36■□□□□ 0.05
LRRC28-214ENST00000559433 MAP4K4O95819 1239 aaPredicted RBP15.36■□□□□ 0.05
LRRC28-214ENST00000559433 INPP5BP32019 993 aa15.36■□□□□ 0.05
LRRC28-214ENST00000559433 RRP1P56182 461 aaKnown RBP15.36■□□□□ 0.05
LRRC28-214ENST00000559433 SH3BP5LQ7L8J4 393 aa15.36■□□□□ 0.05
LRRC28-214ENST00000559433 CTU1Q7Z7A3 348 aaKnown RBP15.36■□□□□ 0.05
LRRC28-214ENST00000559433 ERO1BQ86YB8 467 aa15.36■□□□□ 0.05
LRRC28-214ENST00000559433 TEX11Q8IYF3 940 aa15.36■□□□□ 0.05
LRRC28-214ENST00000559433 SH3RF3Q8TEJ3 882 aaPredicted RBP15.36■□□□□ 0.05
LRRC28-214ENST00000559433 AATFQ9NY61 560 aaKnown RBP eCLIP15.36■□□□□ 0.05
LRRC28-214ENST00000559433 ATRNL1Q5VV63 1379 aa15.36■□□□□ 0.05
LRRC28-214ENST00000559433 DDTLA6NHG4 134 aaPredicted RBP15.35■□□□□ 0.05
LRRC28-214ENST00000559433 IGSF3O75054 1194 aa15.35■□□□□ 0.05
LRRC28-214ENST00000559433 FKTNO75072 461 aa15.35■□□□□ 0.05
LRRC28-214ENST00000559433 BAG3O95817 575 aa15.35■□□□□ 0.05
LRRC28-214ENST00000559433 ADGRA1Q86SQ6 560 aa15.35■□□□□ 0.05
LRRC28-214ENST00000559433 ZNF296Q8WUU4 475 aaPredicted RBP15.35■□□□□ 0.05
LRRC28-214ENST00000559433 CFHR5Q9BXR6 569 aa15.35■□□□□ 0.05
LRRC28-214ENST00000559433 ZNF112Q9UJU3 913 aa15.35■□□□□ 0.05
LRRC28-214ENST00000559433 ATAD5Q96QE3 1844 aa15.35■□□□□ 0.05
LRRC28-214ENST00000559433 COL2A1P02458 1487 aaPredicted RBP15.34■□□□□ 0.05
LRRC28-214ENST00000559433 CCL15-CCL14A0A0B4J2E2 113 aa15.34■□□□□ 0.05
LRRC28-214ENST00000559433 TESPA1A2RU30 521 aaPredicted RBP15.34■□□□□ 0.05
LRRC28-214ENST00000559433 PLCG2P16885 1265 aa15.34■□□□□ 0.05
LRRC28-214ENST00000559433 PPIL2Q13356 520 aa15.34■□□□□ 0.05
LRRC28-214ENST00000559433 PKN2Q16513 984 aaKnown RBP15.34■□□□□ 0.05
LRRC28-214ENST00000559433 CCL15Q16663 113 aa15.34■□□□□ 0.05
LRRC28-214ENST00000559433 MS4A4AQ96JQ5 239 aa15.34■□□□□ 0.05
LRRC28-214ENST00000559433 PTPN18Q99952 460 aa15.34■□□□□ 0.05
LRRC28-214ENST00000559433 ANTXR1Q9H6X2 564 aa15.34■□□□□ 0.05
LRRC28-214ENST00000559433 SIPA1L1O43166 1804 aa15.33■□□□□ 0.05
LRRC28-214ENST00000559433 MYH7P12883 1935 aa15.33■□□□□ 0.05
LRRC28-214ENST00000559433 CETPP11597 493 aa15.33■□□□□ 0.04
LRRC28-214ENST00000559433 CYP7A1P22680 504 aa15.33■□□□□ 0.04
LRRC28-214ENST00000559433 MAP3K12Q12852 859 aa15.33■□□□□ 0.04
LRRC28-214ENST00000559433 SNAPC2Q13487 334 aa15.33■□□□□ 0.04
LRRC28-214ENST00000559433 NOM1Q5C9Z4 860 aaKnown RBP15.33■□□□□ 0.04
LRRC28-214ENST00000559433 NOL9Q5SY16 702 aaKnown RBP15.33■□□□□ 0.04
LRRC28-214ENST00000559433 BRI3BPQ8WY22 251 aa15.33■□□□□ 0.04
LRRC28-214ENST00000559433 LRRCC1Q9C099 1032 aa15.33■□□□□ 0.04
LRRC28-214ENST00000559433 OSBPL5Q9H0X9 879 aaPredicted RBP15.33■□□□□ 0.04
LRRC28-214ENST00000559433 R3HDMLQ9H3Y0 253 aa15.33■□□□□ 0.04
LRRC28-214ENST00000559433 MYH1P12882 1939 aa15.33■□□□□ 0.04
LRRC28-214ENST00000559433 PHIPQ8WWQ0 1821 aa15.32■□□□□ 0.04
LRRC28-214ENST00000559433 IRF6O14896 467 aa15.32■□□□□ 0.04
LRRC28-214ENST00000559433 PPATQ06203 517 aa15.32■□□□□ 0.04
LRRC28-214ENST00000559433 TTF1Q15361 905 aaPredicted RBP15.32■□□□□ 0.04
LRRC28-214ENST00000559433 MAGEB6Q8N7X4 407 aa15.32■□□□□ 0.04
LRRC28-214ENST00000559433 PPIL4Q8WUA2 492 aaKnown RBP eCLIP15.32■□□□□ 0.04
LRRC28-214ENST00000559433 DNAJC2Q99543 621 aaKnown RBP15.32■□□□□ 0.04
LRRC28-214ENST00000559433 ZFYVE28Q9HCC9 887 aa15.32■□□□□ 0.04
LRRC28-214ENST00000559433 PHF20L1A8MW92 1017 aa15.31■□□□□ 0.04
LRRC28-214ENST00000559433 SLURP2P0DP57 97 aa15.31■□□□□ 0.04
LRRC28-214ENST00000559433 PPP4CP60510 307 aa15.31■□□□□ 0.04
LRRC28-214ENST00000559433 CRHR2Q13324 411 aa15.31■□□□□ 0.04
LRRC28-214ENST00000559433 ARHGEF6Q15052 776 aa15.31■□□□□ 0.04
LRRC28-214ENST00000559433 MAPKAPK5Q8IW41 473 aa15.31■□□□□ 0.04
LRRC28-214ENST00000559433 SCYL3Q8IZE3 742 aa15.31■□□□□ 0.04
LRRC28-214ENST00000559433 MIGA1Q8NAN2 632 aa15.31■□□□□ 0.04
LRRC28-214ENST00000559433 TGFBRAP1Q8WUH2 860 aa15.31■□□□□ 0.04
LRRC28-214ENST00000559433 PICK1Q9NRD5 415 aa15.31■□□□□ 0.04
LRRC28-214ENST00000559433 NAV1Q8NEY1 1877 aa15.31■□□□□ 0.04
LRRC28-214ENST00000559433 PTPRFP10586 1907 aa15.31■□□□□ 0.04
LRRC28-214ENST00000559433 GOLIM4O00461 696 aa15.3■□□□□ 0.04
LRRC28-214ENST00000559433 SMARCA5O60264 1052 aaPredicted RBP15.3■□□□□ 0.04
LRRC28-214ENST00000559433 FLT1P17948 1338 aa15.3■□□□□ 0.04
LRRC28-214ENST00000559433 DYNLL1P63167 89 aaKnown RBP15.3■□□□□ 0.04
LRRC28-214ENST00000559433 MAP3K10Q02779 954 aa15.3■□□□□ 0.04
LRRC28-214ENST00000559433 TMED8Q6PL24 325 aaPredicted RBP15.3■□□□□ 0.04
LRRC28-214ENST00000559433 FAM43AQ8N2R8 423 aa15.3■□□□□ 0.04
LRRC28-214ENST00000559433 XPO5Q9HAV4 1204 aaKnown RBP eCLIP15.3■□□□□ 0.04
LRRC28-214ENST00000559433 FAM196BA6NMK8 535 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 85.2 ms