RNA–Protein interactions for RNA: ENST00000558768.5

TRPM1-208, Transcript of transient receptor potential cation channel subfamily M member 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TRPM1, Length 4,581 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRPM1-208ENST00000558768 CLCN6P51797 869 aa10.81□□□□□ -0.68
TRPM1-208ENST00000558768 PSMD2Q13200 908 aa10.81□□□□□ -0.68
TRPM1-208ENST00000558768 SLC4A8Q2Y0W8 1093 aa10.81□□□□□ -0.68
TRPM1-208ENST00000558768 CCDC122Q5T0U0 273 aa10.81□□□□□ -0.68
TRPM1-208ENST00000558768 LEO1Q8WVC0 666 aaPredicted RBP10.81□□□□□ -0.68
TRPM1-208ENST00000558768 TRIM47Q96LD4 638 aa10.81□□□□□ -0.68
TRPM1-208ENST00000558768 CDK19Q9BWU1 502 aa10.81□□□□□ -0.68
TRPM1-208ENST00000558768 PPANQ9NQ55 473 aaKnown RBP10.81□□□□□ -0.68
TRPM1-208ENST00000558768 DDX21Q9NR30 783 aaKnown RBP eCLIP10.81□□□□□ -0.68
TRPM1-208ENST00000558768 EVI5O60447 810 aa10.81□□□□□ -0.68
TRPM1-208ENST00000558768 TTC6Q86TZ1 520 aa10.81□□□□□ -0.68
TRPM1-208ENST00000558768 LCA5Q86VQ0 697 aa10.81□□□□□ -0.68
TRPM1-208ENST00000558768 ATP2A3Q93084 1043 aa10.81□□□□□ -0.68
TRPM1-208ENST00000558768 TSGA10Q9BZW7 698 aa10.81□□□□□ -0.68
TRPM1-208ENST00000558768 SGSM2O43147 1006 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 HNRNPCP07910 306 aaKnown RBP eCLIP10.8□□□□□ -0.68
TRPM1-208ENST00000558768 SPDL1Q96EA4 605 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 GEMIN8Q9NWZ8 242 aaKnown RBP10.8□□□□□ -0.68
TRPM1-208ENST00000558768 TTC37Q6PGP7 1564 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 ARHGEF5Q12774 1597 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 FLIIQ13045 1269 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 TAF11Q15544 211 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 DISP1Q96F81 1524 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 NBPF7P0C2Y1 421 aaPredicted RBP10.8□□□□□ -0.68
TRPM1-208ENST00000558768 PSMD6Q15008 389 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 CLUL1Q15846 466 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 GRAMD4Q6IC98 578 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 TACC3Q9Y6A5 838 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 LRRIQ1Q96JM4 1722 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 APBA1Q02410 837 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 IKQ13123 557 aaPredicted RBP10.8□□□□□ -0.68
TRPM1-208ENST00000558768 NBPF9Q3BBW0 867 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 FBXO18Q8NFZ0 1043 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 RHPN1Q8TCX5 695 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 EPSTI1Q96J88 318 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 TM6SF1Q9BZW5 370 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 SYNCQ9H7C4 482 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 CFAP74Q9C0B2 1584 aa10.8□□□□□ -0.68
TRPM1-208ENST00000558768 FLOT1O75955 427 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 IDEP14735 1019 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 EVI5LQ96CN4 794 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 PLCB1Q9NQ66 1216 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 HOMER3Q9NSC5 361 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 AKR1B15C9JRZ8 316 aaPredicted RBP10.79□□□□□ -0.68
TRPM1-208ENST00000558768 GUCY1B3Q02153 619 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 CCDC68Q9H2F9 335 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 PALMDQ9NP74 551 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 STRN4Q9NRL3 753 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 NOP53Q9NZM5 478 aaKnown RBP10.79□□□□□ -0.68
TRPM1-208ENST00000558768 HMG20BQ9P0W2 317 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 COMMD10Q9Y6G5 202 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 PTCH1Q13635 1447 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 ARHGAP31Q2M1Z3 1444 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 HSPA1LP34931 641 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 RWDD2BP57060 319 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 SKOR1P84550 965 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 CCDC25Q86WR0 208 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 PHACTR3Q96KR7 559 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 OSBPL9Q96SU4 736 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 ECHDC1Q9NTX5 307 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 GNL3LQ9NVN8 582 aaKnown RBP10.79□□□□□ -0.68
TRPM1-208ENST00000558768 KRT71Q3SY84 523 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 TMCO4Q5TGY1 634 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 ATL3Q6DD88 541 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 NEK1Q96PY6 1258 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 CENPKQ9BS16 269 aa10.79□□□□□ -0.68
TRPM1-208ENST00000558768 RTL1A6NKG5 1358 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 MSH6P52701 1360 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 ATP10AO60312 1499 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 FAM83GA6ND36 823 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 FAM173BQ6P4H8 233 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 PLA2G4DQ86XP0 818 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 YIPF3Q9GZM5 350 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 ZKSCAN7Q9P0L1 754 aaPredicted RBP10.78□□□□□ -0.68
TRPM1-208ENST00000558768 SYCP2Q9BX26 1530 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 MAN1A2O60476 641 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 INF2Q27J81 1249 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 MCM10Q7L590 875 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 NUTM2AQ8IVF1 878 aaPredicted RBP10.78□□□□□ -0.68
TRPM1-208ENST00000558768 TCP11Q8WWU5 503 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 BRF1Q92994 677 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 HVCN1Q96D96 273 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 RBM8AQ9Y5S9 174 aaKnown RBP10.78□□□□□ -0.68
TRPM1-208ENST00000558768 ZFYVE9O95405 1425 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 MAST1Q9Y2H9 1570 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 MX2P20592 715 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 ATICP31939 592 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 TCERG1LQ5VWI1 586 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 CAPRIN2Q6IMN6 1127 aaKnown RBP10.78□□□□□ -0.68
TRPM1-208ENST00000558768 ATG3Q9NT62 314 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 SEPT10Q9P0V9 454 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 HDAC9Q9UKV0 1011 aa10.78□□□□□ -0.68
TRPM1-208ENST00000558768 ADAMTS12P58397 1594 aa10.77□□□□□ -0.68
TRPM1-208ENST00000558768 PSMA7O14818 248 aa10.77□□□□□ -0.68
TRPM1-208ENST00000558768 HGSO14964 777 aaPredicted RBP10.77□□□□□ -0.68
TRPM1-208ENST00000558768 MYL5Q02045 173 aa10.77□□□□□ -0.68
TRPM1-208ENST00000558768 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.77□□□□□ -0.68
TRPM1-208ENST00000558768 MUM1L1Q5H9M0 696 aa10.77□□□□□ -0.68
TRPM1-208ENST00000558768 NBPF10Q6P3W6 841 aaKnown RBP10.77□□□□□ -0.68
TRPM1-208ENST00000558768 SARM1Q6SZW1 724 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms