RNA–Protein interactions for RNA: ENST00000558540.5

MRVI1-217, Transcript of murine retrovirus integration site 1 homolog, humanhuman

TSL 2 BASIC

Gene MRVI1, Length 3,339 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRVI1-217ENST00000558540 KCNA3P22001 575 aa12.47□□□□□ -0.41
MRVI1-217ENST00000558540 KLRK1P26718 216 aa12.47□□□□□ -0.41
MRVI1-217ENST00000558540 BCAMP50895 628 aa12.47□□□□□ -0.41
MRVI1-217ENST00000558540 ZNF589Q86UQ0 364 aaPredicted RBP12.47□□□□□ -0.41
MRVI1-217ENST00000558540 LRRN4CLQ8ND94 238 aa12.47□□□□□ -0.41
MRVI1-217ENST00000558540 CLIP2Q9UDT6 1046 aa12.47□□□□□ -0.41
MRVI1-217ENST00000558540 SMC3Q9UQE7 1217 aa12.47□□□□□ -0.41
MRVI1-217ENST00000558540 MCCP23508 829 aa12.47□□□□□ -0.41
MRVI1-217ENST00000558540 FAM184AQ8NB25 1140 aa12.47□□□□□ -0.41
MRVI1-217ENST00000558540 TBC1D16Q8TBP0 767 aa12.47□□□□□ -0.41
MRVI1-217ENST00000558540 SPTLC3Q9NUV7 552 aa12.47□□□□□ -0.41
MRVI1-217ENST00000558540 FAM205AQ6ZU69 1335 aa12.46□□□□□ -0.41
MRVI1-217ENST00000558540 STK3Q13188 491 aa12.46□□□□□ -0.41
MRVI1-217ENST00000558540 GNL2Q13823 731 aaKnown RBP12.46□□□□□ -0.41
MRVI1-217ENST00000558540 CAVIN4Q5BKX8 364 aa12.46□□□□□ -0.41
MRVI1-217ENST00000558540 CC2D2BQ6DHV5 1058 aa12.46□□□□□ -0.41
MRVI1-217ENST00000558540 CWC27Q6UX04 472 aaKnown RBP12.46□□□□□ -0.41
MRVI1-217ENST00000558540 CACTINQ8WUQ7 758 aaKnown RBP12.46□□□□□ -0.41
MRVI1-217ENST00000558540 TM6SF1Q9BZW5 370 aa12.46□□□□□ -0.41
MRVI1-217ENST00000558540 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.46□□□□□ -0.41
MRVI1-217ENST00000558540 GNL3LQ9NVN8 582 aaKnown RBP12.46□□□□□ -0.41
MRVI1-217ENST00000558540 WTIPA6NIX2 430 aaPredicted RBP12.46□□□□□ -0.42
MRVI1-217ENST00000558540 MSL1Q68DK7 614 aa12.46□□□□□ -0.42
MRVI1-217ENST00000558540 PI16Q6UXB8 463 aa12.46□□□□□ -0.42
MRVI1-217ENST00000558540 ALDH8A1Q9H2A2 487 aaPredicted RBP12.46□□□□□ -0.42
MRVI1-217ENST00000558540 NDUFB9Q9Y6M9 179 aa12.46□□□□□ -0.42
MRVI1-217ENST00000558540 WDR33Q9C0J8 1336 aaKnown RBP12.46□□□□□ -0.42
MRVI1-217ENST00000558540 COL4A5P29400 1685 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 SNAP23O00161 211 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 CCDC192P0DO97 292 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 EP400NLQ6ZTU2 488 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 POLLQ9UGP5 575 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 GREB1LQ9C091 1923 aaPredicted RBP12.45□□□□□ -0.42
MRVI1-217ENST00000558540 SEC31AO94979 1220 aaKnown RBP12.45□□□□□ -0.42
MRVI1-217ENST00000558540 SBF1O95248 1867 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 LIG1P18858 919 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 SYT1P21579 422 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 TGFB2P61812 414 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 PTH1RQ03431 593 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 RAD51AP2Q09MP3 1159 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 CCDC144BQ3MJ40 725 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 KRBA2Q6ZNG9 492 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 SLC51AQ86UW1 340 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 CCDC144CPQ8IYA2 1237 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 BICD2Q8TD16 824 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 SECISBP2LQ93073 1101 aaKnown RBP12.45□□□□□ -0.42
MRVI1-217ENST00000558540 CNKSR1Q969H4 720 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 CALCOCO1Q9P1Z2 691 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 SIPA1L1O43166 1804 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 HIBADHP31937 336 aaKnown RBP12.45□□□□□ -0.42
MRVI1-217ENST00000558540 GYG1P46976 350 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 FKBP1AP62942 108 aaKnown RBP12.45□□□□□ -0.42
MRVI1-217ENST00000558540 C2CD5Q86YS7 1000 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 VPS33BQ9H267 617 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 GGA1Q9UJY5 639 aa12.45□□□□□ -0.42
MRVI1-217ENST00000558540 BAZ2AQ9UIF9 1905 aaKnown RBP12.45□□□□□ -0.42
MRVI1-217ENST00000558540 H0YIN7 160 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 M0R2C6 588 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 PDE6AP16499 860 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 GABPB1Q06547 395 aaPredicted RBP12.44□□□□□ -0.42
MRVI1-217ENST00000558540 PTPN14Q15678 1187 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 TXNRD3Q86VQ6 643 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 OSBP2Q969R2 916 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 MYH1P12882 1939 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 LOC102724159A0A0B4J2E5 919 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 SMTNL1A8MU46 457 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 IBSPP21815 317 aaPredicted RBP12.44□□□□□ -0.42
MRVI1-217ENST00000558540 PTGER2P43116 358 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 PWP2Q15269 919 aaKnown RBP12.44□□□□□ -0.42
MRVI1-217ENST00000558540 ALX1Q15699 326 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 ZNF384Q8TF68 577 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 STX6O43752 255 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 ZNF804AQ7Z570 1209 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 TNMDQ9H2S6 317 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 ZSWIM4Q9H7M6 989 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 DACT1Q9NYF0 836 aa12.44□□□□□ -0.42
MRVI1-217ENST00000558540 LARGE1O95461 756 aa12.43□□□□□ -0.42
MRVI1-217ENST00000558540 PRPF40BQ6NWY9 871 aaKnown RBP12.43□□□□□ -0.42
MRVI1-217ENST00000558540 HOMER1Q86YM7 354 aa12.43□□□□□ -0.42
MRVI1-217ENST00000558540 SUGT1Q9Y2Z0 365 aa12.43□□□□□ -0.42
MRVI1-217ENST00000558540 FBXL16Q8N461 479 aa12.43□□□□□ -0.42
MRVI1-217ENST00000558540 SNX14Q9Y5W7 946 aa12.43□□□□□ -0.42
MRVI1-217ENST00000558540 CTIFO43310 598 aaKnown RBP12.42□□□□□ -0.42
MRVI1-217ENST00000558540 CHGBP05060 677 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 FKBP4Q02790 459 aaKnown RBP eCLIP12.42□□□□□ -0.42
MRVI1-217ENST00000558540 TYRO3Q06418 890 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 SYT10Q6XYQ8 523 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 DDX11Q96FC9 970 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 TTC14Q96N46 770 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 COA1Q9GZY4 146 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 PLEKHA4Q9H4M7 779 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 LCMT1Q9UIC8 334 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 WWC3Q9ULE0 1092 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 U3KPZ7 1027 aaPredicted RBP12.42□□□□□ -0.42
MRVI1-217ENST00000558540 SKILP12757 684 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 UBE2HP62256 183 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 PSMD1Q99460 953 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 NUP62CLQ9H1M0 184 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 CBX8Q9HC52 389 aa12.42□□□□□ -0.42
MRVI1-217ENST00000558540 CD2APQ9Y5K6 639 aa12.42□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms