RNA–Protein interactions for RNA: ENST00000558428.5

SMAD3-205, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-205ENST00000558428 ZFPM1Q8IX07 1006 aa14.96□□□□□ -0.01
SMAD3-205ENST00000558428 HOOK2Q96ED9 719 aa14.96□□□□□ -0.01
SMAD3-205ENST00000558428 OTOFQ9HC10 1997 aa14.95□□□□□ -0.02
SMAD3-205ENST00000558428 TCRBV5S4A2TA0A5A2 114 aa14.95□□□□□ -0.02
SMAD3-205ENST00000558428 NPM3O75607 178 aaKnown RBP14.95□□□□□ -0.02
SMAD3-205ENST00000558428 ADD2P35612 726 aa14.95□□□□□ -0.02
SMAD3-205ENST00000558428 PDE1AP54750 535 aa14.95□□□□□ -0.02
SMAD3-205ENST00000558428 DCAF15Q66K64 600 aa14.95□□□□□ -0.02
SMAD3-205ENST00000558428 ZSCAN25Q6NSZ9 544 aa14.95□□□□□ -0.02
SMAD3-205ENST00000558428 CERS3Q8IU89 383 aa14.95□□□□□ -0.02
SMAD3-205ENST00000558428 TGFBRAP1Q8WUH2 860 aa14.95□□□□□ -0.02
SMAD3-205ENST00000558428 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.95□□□□□ -0.02
SMAD3-205ENST00000558428 STAP2Q9UGK3 403 aa14.95□□□□□ -0.02
SMAD3-205ENST00000558428 MAGEB6P1A0A0J9YX57 407 aa14.94□□□□□ -0.02
SMAD3-205ENST00000558428 DDTLA6NHG4 134 aaPredicted RBP14.94□□□□□ -0.02
SMAD3-205ENST00000558428 AOC2O75106 756 aa14.94□□□□□ -0.02
SMAD3-205ENST00000558428 NEFLP07196 543 aa14.94□□□□□ -0.02
SMAD3-205ENST00000558428 SLFNL1Q499Z3 407 aa14.94□□□□□ -0.02
SMAD3-205ENST00000558428 LDLRAD1Q5T700 205 aa14.94□□□□□ -0.02
SMAD3-205ENST00000558428 MIGA2Q7L4E1 593 aa14.94□□□□□ -0.02
SMAD3-205ENST00000558428 MAPKAPK5Q8IW41 473 aa14.94□□□□□ -0.02
SMAD3-205ENST00000558428 JMYQ8N9B5 988 aa14.94□□□□□ -0.02
SMAD3-205ENST00000558428 KBTBD3Q8NAB2 608 aa14.94□□□□□ -0.02
SMAD3-205ENST00000558428 CCDC102AQ96A19 550 aa14.94□□□□□ -0.02
SMAD3-205ENST00000558428 CSRNP1Q96S65 589 aa14.94□□□□□ -0.02
SMAD3-205ENST00000558428 OSBPL5Q9H0X9 879 aaPredicted RBP14.94□□□□□ -0.02
SMAD3-205ENST00000558428 MYH1P12882 1939 aa14.94□□□□□ -0.02
SMAD3-205ENST00000558428 FAM155AB1AL88 458 aaPredicted RBP14.93□□□□□ -0.02
SMAD3-205ENST00000558428 SLC10A3P09131 477 aa14.93□□□□□ -0.02
SMAD3-205ENST00000558428 USP5P45974 858 aa14.93□□□□□ -0.02
SMAD3-205ENST00000558428 UBE3CQ15386 1083 aa14.93□□□□□ -0.02
SMAD3-205ENST00000558428 SH3BP5LQ7L8J4 393 aa14.93□□□□□ -0.02
SMAD3-205ENST00000558428 RASAL3Q86YV0 1011 aa14.93□□□□□ -0.02
SMAD3-205ENST00000558428 ANKRD13AQ8IZ07 590 aa14.93□□□□□ -0.02
SMAD3-205ENST00000558428 RIOK1Q9BRS2 568 aaKnown RBP14.93□□□□□ -0.02
SMAD3-205ENST00000558428 ZNF341Q9BYN7 854 aa14.93□□□□□ -0.02
SMAD3-205ENST00000558428 FLT1P17948 1338 aa14.92□□□□□ -0.02
SMAD3-205ENST00000558428 CHGBP05060 677 aa14.92□□□□□ -0.02
SMAD3-205ENST00000558428 NOGQ13253 232 aa14.92□□□□□ -0.02
SMAD3-205ENST00000558428 PLEKHM2Q8IWE5 1019 aa14.92□□□□□ -0.02
SMAD3-205ENST00000558428 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.92□□□□□ -0.026e-6■□□□□ 9
SMAD3-205ENST00000558428 SLC10A4Q96EP9 437 aa14.92□□□□□ -0.02
SMAD3-205ENST00000558428 CLMNQ96JQ2 1002 aa14.92□□□□□ -0.02
SMAD3-205ENST00000558428 WRNIP1Q96S55 665 aa14.92□□□□□ -0.02
SMAD3-205ENST00000558428 FSD1Q9BTV5 496 aa14.92□□□□□ -0.02
SMAD3-205ENST00000558428 ATRNL1Q5VV63 1379 aa14.92□□□□□ -0.02
SMAD3-205ENST00000558428 THSD7BQ9C0I4 1608 aa14.92□□□□□ -0.02
SMAD3-205ENST00000558428 COL2A1P02458 1487 aaPredicted RBP14.91□□□□□ -0.02
SMAD3-205ENST00000558428 UNCXA6NJT0 531 aa14.91□□□□□ -0.02
SMAD3-205ENST00000558428 MAP2K2P36507 400 aa14.91□□□□□ -0.02
SMAD3-205ENST00000558428 MAP3K9P80192 1104 aa14.91□□□□□ -0.02
SMAD3-205ENST00000558428 LRRFIP1Q32MZ4 808 aaKnown RBP14.91□□□□□ -0.02
SMAD3-205ENST00000558428 LCORLQ8N3X6 602 aa14.91□□□□□ -0.02
SMAD3-205ENST00000558428 CRNKL1Q9BZJ0 848 aaKnown RBP14.91□□□□□ -0.02
SMAD3-205ENST00000558428 CSADQ9Y600 493 aa14.91□□□□□ -0.02
SMAD3-205ENST00000558428 NAV1Q8NEY1 1877 aa14.91□□□□□ -0.02
SMAD3-205ENST00000558428 RNF113AO15541 343 aaKnown RBP14.9□□□□□ -0.02
SMAD3-205ENST00000558428 MBD4O95243 580 aa14.9□□□□□ -0.02
SMAD3-205ENST00000558428 ZFYP08048 801 aaPredicted RBP14.9□□□□□ -0.02
SMAD3-205ENST00000558428 MKRN3Q13064 507 aaKnown RBP14.9□□□□□ -0.02
SMAD3-205ENST00000558428 VGLL4Q14135 290 aa14.9□□□□□ -0.02
SMAD3-205ENST00000558428 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.9□□□□□ -0.02
SMAD3-205ENST00000558428 AIDAQ96BJ3 306 aa14.9□□□□□ -0.02
SMAD3-205ENST00000558428 EVI5LQ96CN4 794 aa14.9□□□□□ -0.02
SMAD3-205ENST00000558428 ZIC5Q96T25 663 aa14.9□□□□□ -0.02
SMAD3-205ENST00000558428 DHX36Q9H2U1 1008 aaKnown RBP14.9□□□□□ -0.02
SMAD3-205ENST00000558428 ARMT1Q9H993 441 aa14.9□□□□□ -0.02
SMAD3-205ENST00000558428 ELP3Q9H9T3 547 aa14.9□□□□□ -0.02
SMAD3-205ENST00000558428 SAP30BPQ9UHR5 308 aaKnown RBP14.9□□□□□ -0.02
SMAD3-205ENST00000558428 TRIM6-TRIM34B2RNG4 842 aa14.89□□□□□ -0.03
SMAD3-205ENST00000558428 SLURP2P0DP57 97 aa14.89□□□□□ -0.03
SMAD3-205ENST00000558428 KIF23Q02241 960 aaPredicted RBP14.89□□□□□ -0.03
SMAD3-205ENST00000558428 MAP2K1Q02750 393 aaPredicted RBP14.89□□□□□ -0.03
SMAD3-205ENST00000558428 APPBP2Q92624 585 aa14.89□□□□□ -0.03
SMAD3-205ENST00000558428 ZKSCAN4Q969J2 545 aaPredicted RBP14.89□□□□□ -0.03
SMAD3-205ENST00000558428 PUS7LQ9H0K6 701 aaKnown RBP14.89□□□□□ -0.03
SMAD3-205ENST00000558428 OSBPL3Q9H4L5 887 aa14.89□□□□□ -0.03
SMAD3-205ENST00000558428 PALD1Q9ULE6 856 aa14.89□□□□□ -0.03
SMAD3-205ENST00000558428 SIPA1L1O43166 1804 aa14.89□□□□□ -0.03
SMAD3-205ENST00000558428 BAZ2AQ9UIF9 1905 aaKnown RBP14.88□□□□□ -0.03
SMAD3-205ENST00000558428 TBC1D12O60347 775 aa14.88□□□□□ -0.03
SMAD3-205ENST00000558428 HLA-DOAP06340 250 aa14.88□□□□□ -0.03
SMAD3-205ENST00000558428 PDE4AP27815 886 aa14.88□□□□□ -0.03
SMAD3-205ENST00000558428 INPP5BP32019 993 aa14.88□□□□□ -0.03
SMAD3-205ENST00000558428 SLC4A8Q2Y0W8 1093 aa14.88□□□□□ -0.03
SMAD3-205ENST00000558428 SPRYD7Q5W111 196 aa14.88□□□□□ -0.03
SMAD3-205ENST00000558428 SDR42E1Q8WUS8 393 aa14.88□□□□□ -0.03
SMAD3-205ENST00000558428 OSBP2Q969R2 916 aa14.88□□□□□ -0.03
SMAD3-205ENST00000558428 WNK4Q96J92 1243 aa14.88□□□□□ -0.03
SMAD3-205ENST00000558428 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.88□□□□□ -0.03
SMAD3-205ENST00000558428 PI4KBQ9UBF8 816 aa14.88□□□□□ -0.03
SMAD3-205ENST00000558428 ZNF112Q9UJU3 913 aa14.88□□□□□ -0.03
SMAD3-205ENST00000558428 SNCAIPQ9Y6H5 919 aa14.88□□□□□ -0.03
SMAD3-205ENST00000558428 FAM196BA6NMK8 535 aa14.87□□□□□ -0.03
SMAD3-205ENST00000558428 PRKAB2O43741 272 aa14.87□□□□□ -0.03
SMAD3-205ENST00000558428 HSPA1AP0DMV8 641 aaKnown RBP14.87□□□□□ -0.03
SMAD3-205ENST00000558428 HSPA1BP0DMV9 641 aaKnown RBP14.87□□□□□ -0.03
SMAD3-205ENST00000558428 MAP3K10Q02779 954 aa14.87□□□□□ -0.03
SMAD3-205ENST00000558428 CENPQQ7L2Z9 268 aaPredicted RBP14.87□□□□□ -0.03
SMAD3-205ENST00000558428 RILPL2Q969X0 211 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms