RNA–Protein interactions for RNA: ENST00000558223.5

MARK3-212, Transcript of microtubule affinity regulating kinase 3, humanhuman

TSL 1 (best)

Gene MARK3, Length 908 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MARK3-212ENST00000558223 AMPD3Q01432 767 aa8.71□□□□□ -1.02
MARK3-212ENST00000558223 NFX1Q12986 1120 aaKnown RBP8.71□□□□□ -1.02
MARK3-212ENST00000558223 SKAP1Q86WV1 359 aa8.71□□□□□ -1.02
MARK3-212ENST00000558223 NUDT12Q9BQG2 462 aa8.71□□□□□ -1.02
MARK3-212ENST00000558223 UBA5Q9GZZ9 404 aa8.71□□□□□ -1.02
MARK3-212ENST00000558223 GEMIN8Q9NWZ8 242 aaKnown RBP8.71□□□□□ -1.02
MARK3-212ENST00000558223 POLIQ9UNA4 740 aa8.71□□□□□ -1.02
MARK3-212ENST00000558223 BACH1O14867 736 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 PRC1O43663 620 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 PTMSP20962 102 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 ATP8B2P98198 1209 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 MSS51Q4VC12 460 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 ZNF530Q6P9A1 599 aaPredicted RBP8.7□□□□□ -1.02
MARK3-212ENST00000558223 SH3BP5LQ7L8J4 393 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 HSCBQ8IWL3 235 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 SIRT2Q8IXJ6 389 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 LTV1Q96GA3 475 aaPredicted RBP8.7□□□□□ -1.02
MARK3-212ENST00000558223 SEC16BQ96JE7 1060 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 CFHR5Q9BXR6 569 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 ZNF408Q9H9D4 720 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 TYW1Q9NV66 732 aaKnown RBP8.7□□□□□ -1.02
MARK3-212ENST00000558223 PKD2L1Q9P0L9 805 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 DBF4Q9UBU7 674 aaPredicted RBP8.7□□□□□ -1.02
MARK3-212ENST00000558223 PRR12Q9ULL5 1215 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 VIRMAQ69YN4 1812 aaKnown RBP8.7□□□□□ -1.02
MARK3-212ENST00000558223 RGS12O14924 1447 aa8.7□□□□□ -1.02
MARK3-212ENST00000558223 LRRC37A3O60309 1634 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 ALDH1L1O75891 902 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 DDX58O95786 925 aaKnown RBP8.69□□□□□ -1.02
MARK3-212ENST00000558223 RPIAP49247 311 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 EIF4A1P60842 406 aaKnown RBP8.69□□□□□ -1.02
MARK3-212ENST00000558223 BIRC2Q13490 618 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 COX20Q5RI15 118 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 NUTM2GQ5VZR2 741 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 ANKS3Q6ZW76 656 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 TNS4Q8IZW8 715 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 GJD3Q8N144 294 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 ANKRD24Q8TF21 1146 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 RAPGEF4Q8WZA2 1011 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 APPBP2Q92624 585 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 CEP89Q96ST8 783 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 FANCLQ9NW38 375 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 AOX1Q06278 1338 aa8.69□□□□□ -1.02
MARK3-212ENST00000558223 RGPD8O14715 1765 aaPredicted RBP8.68□□□□□ -1.02
MARK3-212ENST00000558223 CACNA1FO60840 1977 aa8.68□□□□□ -1.02
MARK3-212ENST00000558223 BTBD11A6QL63 1104 aa8.68□□□□□ -1.02
MARK3-212ENST00000558223 TNFRSF10BO14763 440 aa8.68□□□□□ -1.02
MARK3-212ENST00000558223 RNMTO43148 476 aaKnown RBP8.68□□□□□ -1.02
MARK3-212ENST00000558223 REC8O95072 547 aa8.68□□□□□ -1.02
MARK3-212ENST00000558223 UBTFL1P0CB47 393 aaPredicted RBP8.68□□□□□ -1.02
MARK3-212ENST00000558223 TATP17735 454 aaPredicted RBP8.68□□□□□ -1.02
MARK3-212ENST00000558223 DNM1Q05193 864 aaKnown RBP8.68□□□□□ -1.02
MARK3-212ENST00000558223 TAF1CQ15572 869 aaPredicted RBP8.68□□□□□ -1.02
MARK3-212ENST00000558223 ARSHQ5FYA8 562 aa8.68□□□□□ -1.02
MARK3-212ENST00000558223 ODR4Q5SWX8 454 aa8.68□□□□□ -1.02
MARK3-212ENST00000558223 TTC22Q5TAA0 569 aa8.68□□□□□ -1.02
MARK3-212ENST00000558223 ATCAYQ86WG3 371 aa8.68□□□□□ -1.02
MARK3-212ENST00000558223 RASGRP4Q8TDF6 673 aa8.68□□□□□ -1.02
MARK3-212ENST00000558223 DEPDC7Q96QD5 511 aa8.68□□□□□ -1.02
MARK3-212ENST00000558223 ORAI2Q96SN7 254 aa8.68□□□□□ -1.02
MARK3-212ENST00000558223 HYPKQ9NX55 129 aa8.68□□□□□ -1.02
MARK3-212ENST00000558223 PPP1R12BO60237 982 aaPredicted RBP8.67□□□□□ -1.02
MARK3-212ENST00000558223 CPDO75976 1380 aa8.67□□□□□ -1.02
MARK3-212ENST00000558223 RHBDL3P58872 404 aa8.67□□□□□ -1.02
MARK3-212ENST00000558223 FOXC1Q12948 553 aa8.67□□□□□ -1.02
MARK3-212ENST00000558223 SLC4A10Q6U841 1118 aa8.67□□□□□ -1.02
MARK3-212ENST00000558223 FERMT3Q86UX7 667 aa8.67□□□□□ -1.02
MARK3-212ENST00000558223 SLC10A4Q96EP9 437 aa8.67□□□□□ -1.02
MARK3-212ENST00000558223 LRRCC1Q9C099 1032 aa8.67□□□□□ -1.02
MARK3-212ENST00000558223 TSPAN10Q9H1Z9 355 aaPredicted RBP8.67□□□□□ -1.02
MARK3-212ENST00000558223 SNTG2Q9NY99 539 aa8.67□□□□□ -1.02
MARK3-212ENST00000558223 CHMP5Q9NZZ3 219 aa8.67□□□□□ -1.02
MARK3-212ENST00000558223 ATP10DQ9P241 1426 aa8.67□□□□□ -1.02
MARK3-212ENST00000558223 R3HCC1Q9Y3T6 440 aaKnown RBP8.67□□□□□ -1.02
MARK3-212ENST00000558223 MED1Q15648 1581 aaPredicted RBP8.66□□□□□ -1.02
MARK3-212ENST00000558223 TMEM94Q12767 1356 aa8.66□□□□□ -1.02
MARK3-212ENST00000558223 FAM187AA6NFU0 413 aa8.66□□□□□ -1.02
MARK3-212ENST00000558223 CD2BP2O95400 341 aaKnown RBP8.66□□□□□ -1.02
MARK3-212ENST00000558223 MMP16P51512 607 aa8.66□□□□□ -1.02
MARK3-212ENST00000558223 RABEP1Q15276 862 aa8.66□□□□□ -1.02
MARK3-212ENST00000558223 NFKBIBQ15653 356 aa8.66□□□□□ -1.02
MARK3-212ENST00000558223 KRT24Q2M2I5 525 aa8.66□□□□□ -1.02
MARK3-212ENST00000558223 SPTY2D1Q68D10 685 aaPredicted RBP8.66□□□□□ -1.02
MARK3-212ENST00000558223 TEX2Q8IWB9 1127 aa8.66□□□□□ -1.02
MARK3-212ENST00000558223 IFNL2Q8IZJ0 200 aa8.66□□□□□ -1.02
MARK3-212ENST00000558223 DNAAF4Q8WXU2 420 aa8.66□□□□□ -1.02
MARK3-212ENST00000558223 MEIS3Q99687 375 aa8.66□□□□□ -1.02
MARK3-212ENST00000558223 MIS18AQ9NYP9 233 aa8.66□□□□□ -1.02
MARK3-212ENST00000558223 TCEAL9Q9UHQ7 104 aa8.66□□□□□ -1.02
MARK3-212ENST00000558223 MARF1Q9Y4F3 1742 aaKnown RBP8.66□□□□□ -1.02
MARK3-212ENST00000558223 HEG1Q9ULI3 1381 aa8.65□□□□□ -1.02
MARK3-212ENST00000558223 TMEM229AB2RXF0 380 aa8.65□□□□□ -1.02
MARK3-212ENST00000558223 EIF1AYO14602 144 aaKnown RBP8.65□□□□□ -1.02
MARK3-212ENST00000558223 MCCP23508 829 aa8.65□□□□□ -1.02
MARK3-212ENST00000558223 NASPP49321 788 aaPredicted RBP8.65□□□□□ -1.02
MARK3-212ENST00000558223 MCM2P49736 904 aa8.65□□□□□ -1.02
MARK3-212ENST00000558223 AGERQ15109 404 aa8.65□□□□□ -1.02
MARK3-212ENST00000558223 LRP10Q7Z4F1 713 aa8.65□□□□□ -1.02
MARK3-212ENST00000558223 HOMER1Q86YM7 354 aa8.65□□□□□ -1.02
MARK3-212ENST00000558223 ERC1Q8IUD2 1116 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms