RNA–Protein interactions for RNA: ENST00000557884.5

USP3-205, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 3

Gene USP3, Length 958 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-205ENST00000557884 ARMT1Q9H993 441 aa17.31■□□□□ 0.36
USP3-205ENST00000557884 ANGEL1Q9UNK9 670 aaKnown RBP17.31■□□□□ 0.36
USP3-205ENST00000557884 MYO5AQ9Y4I1 1855 aaKnown RBP17.31■□□□□ 0.36
USP3-205ENST00000557884 DOCK2Q92608 1830 aa17.31■□□□□ 0.36
USP3-205ENST00000557884 USP5P45974 858 aa17.3■□□□□ 0.36
USP3-205ENST00000557884 GRM1Q13255 1194 aa17.3■□□□□ 0.36
USP3-205ENST00000557884 MIGA2Q7L4E1 593 aa17.3■□□□□ 0.36
USP3-205ENST00000557884 ARMC9Q7Z3E5 817 aa17.3■□□□□ 0.36
USP3-205ENST00000557884 RILPL2Q969X0 211 aa17.3■□□□□ 0.36
USP3-205ENST00000557884 PUS7LQ9H0K6 701 aaKnown RBP17.3■□□□□ 0.36
USP3-205ENST00000557884 OSBPL5Q9H0X9 879 aaPredicted RBP17.3■□□□□ 0.36
USP3-205ENST00000557884 SAP30BPQ9UHR5 308 aaKnown RBP17.3■□□□□ 0.36
USP3-205ENST00000557884 ECM29Q5VYK3 1845 aa17.3■□□□□ 0.36
USP3-205ENST00000557884 RPAP1Q9BWH6 1393 aaPredicted RBP17.29■□□□□ 0.36
USP3-205ENST00000557884 FLT1P17948 1338 aa17.29■□□□□ 0.36
USP3-205ENST00000557884 DDTLA6NHG4 134 aaPredicted RBP17.29■□□□□ 0.36
USP3-205ENST00000557884 RASSF10A6NK89 507 aa17.29■□□□□ 0.36
USP3-205ENST00000557884 PPP1R12BO60237 982 aaPredicted RBP17.29■□□□□ 0.36
USP3-205ENST00000557884 ZFYP08048 801 aaPredicted RBP17.29■□□□□ 0.36
USP3-205ENST00000557884 SLURP2P0DP57 97 aa17.29■□□□□ 0.36
USP3-205ENST00000557884 FKBP1BP68106 108 aa17.29■□□□□ 0.36
USP3-205ENST00000557884 SLC4A8Q2Y0W8 1093 aa17.29■□□□□ 0.36
USP3-205ENST00000557884 ERICH6BQ5W0A0 696 aa17.29■□□□□ 0.36
USP3-205ENST00000557884 CERS3Q8IU89 383 aa17.29■□□□□ 0.36
USP3-205ENST00000557884 OSBP2Q969R2 916 aa17.29■□□□□ 0.36
USP3-205ENST00000557884 CSRNP1Q96S65 589 aa17.29■□□□□ 0.36
USP3-205ENST00000557884 PPP4R2Q9NY27 417 aa17.29■□□□□ 0.36
USP3-205ENST00000557884 USP2O75604 605 aaPredicted RBP17.28■□□□□ 0.36
USP3-205ENST00000557884 NPM3O75607 178 aaKnown RBP17.28■□□□□ 0.36
USP3-205ENST00000557884 DEFB115Q30KQ5 88 aa17.28■□□□□ 0.36
USP3-205ENST00000557884 LRRFIP1Q32MZ4 808 aaKnown RBP17.28■□□□□ 0.36
USP3-205ENST00000557884 CYP4F22Q6NT55 531 aa17.28■□□□□ 0.36
USP3-205ENST00000557884 APPBP2Q92624 585 aa17.28■□□□□ 0.36
USP3-205ENST00000557884 AIDAQ96BJ3 306 aa17.28■□□□□ 0.36
USP3-205ENST00000557884 SEC62Q99442 399 aaKnown RBP17.28■□□□□ 0.36
USP3-205ENST00000557884 CRNKL1Q9BZJ0 848 aaKnown RBP17.28■□□□□ 0.36
USP3-205ENST00000557884 M0R2C6 588 aa17.27■□□□□ 0.36
USP3-205ENST00000557884 PRKAB2O43741 272 aa17.27■□□□□ 0.36
USP3-205ENST00000557884 GSPT1P15170 499 aaKnown RBP17.27■□□□□ 0.36
USP3-205ENST00000557884 IREB2P48200 963 aaKnown RBP17.27■□□□□ 0.36
USP3-205ENST00000557884 TTC22Q5TAA0 569 aa17.27■□□□□ 0.36
USP3-205ENST00000557884 DNAJC5GQ8N7S2 189 aa17.27■□□□□ 0.36
USP3-205ENST00000557884 SDR42E1Q8WUS8 393 aa17.27■□□□□ 0.36
USP3-205ENST00000557884 PAPPA2Q9BXP8 1791 aa17.27■□□□□ 0.35
USP3-205ENST00000557884 TRPM7Q96QT4 1865 aa17.27■□□□□ 0.35
USP3-205ENST00000557884 VEGFBP49765 207 aa17.26■□□□□ 0.35
USP3-205ENST00000557884 ZNF157P51786 506 aaPredicted RBP17.26■□□□□ 0.35
USP3-205ENST00000557884 DCAF15Q66K64 600 aa17.26■□□□□ 0.35
USP3-205ENST00000557884 RGMBQ6NW40 437 aa17.26■□□□□ 0.35
USP3-205ENST00000557884 KLRG1Q96E93 195 aa17.26■□□□□ 0.35
USP3-205ENST00000557884 HOOK2Q96ED9 719 aa17.26■□□□□ 0.35
USP3-205ENST00000557884 CLMNQ96JQ2 1002 aa17.26■□□□□ 0.35
USP3-205ENST00000557884 CAPNS2Q96L46 248 aa17.26■□□□□ 0.35
USP3-205ENST00000557884 PALD1Q9ULE6 856 aa17.26■□□□□ 0.35
USP3-205ENST00000557884 ZMYM1Q5SVZ6 1142 aa17.25■□□□□ 0.35
USP3-205ENST00000557884 LDLRAD1Q5T700 205 aa17.25■□□□□ 0.35
USP3-205ENST00000557884 WRNIP1Q96S55 665 aa17.25■□□□□ 0.35
USP3-205ENST00000557884 ZNF341Q9BYN7 854 aa17.25■□□□□ 0.35
USP3-205ENST00000557884 SLC4A4Q9Y6R1 1079 aa17.25■□□□□ 0.35
USP3-205ENST00000557884 ATRNL1Q5VV63 1379 aa17.25■□□□□ 0.35
USP3-205ENST00000557884 FAM196BA6NMK8 535 aa17.24■□□□□ 0.35
USP3-205ENST00000557884 GPAA1O43292 621 aa17.24■□□□□ 0.35
USP3-205ENST00000557884 MAP3K11Q16584 847 aa17.24■□□□□ 0.35
USP3-205ENST00000557884 CCDC129Q6ZRS4 1044 aa17.24■□□□□ 0.35
USP3-205ENST00000557884 HHIPL1Q96JK4 782 aa17.24■□□□□ 0.35
USP3-205ENST00000557884 FAM227BQ96M60 508 aa17.24■□□□□ 0.35
USP3-205ENST00000557884 STRBPQ96SI9 672 aaKnown RBP17.24■□□□□ 0.35
USP3-205ENST00000557884 WDR33Q9C0J8 1336 aaKnown RBP17.23■□□□□ 0.35
USP3-205ENST00000557884 A0A0D9SFI3 127 aa17.23■□□□□ 0.35
USP3-205ENST00000557884 AOC2O75106 756 aa17.23■□□□□ 0.35
USP3-205ENST00000557884 SDSP20132 328 aa17.23■□□□□ 0.35
USP3-205ENST00000557884 MAP3K9P80192 1104 aa17.23■□□□□ 0.35
USP3-205ENST00000557884 MKRN3Q13064 507 aaKnown RBP17.23■□□□□ 0.35
USP3-205ENST00000557884 NMIQ13287 307 aaPredicted RBP17.23■□□□□ 0.35
USP3-205ENST00000557884 RASAL3Q86YV0 1011 aa17.23■□□□□ 0.35
USP3-205ENST00000557884 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.23■□□□□ 0.35
USP3-205ENST00000557884 DHX36Q9H2U1 1008 aaKnown RBP17.23■□□□□ 0.35
USP3-205ENST00000557884 ELP3Q9H9T3 547 aa17.23■□□□□ 0.35
USP3-205ENST00000557884 DCP1AQ9NPI6 582 aaPredicted RBP17.23■□□□□ 0.35
USP3-205ENST00000557884 MCM9Q9NXL9 1143 aa17.23■□□□□ 0.35
USP3-205ENST00000557884 PCNTO95613 3336 aa17.23■□□□□ 0.35
USP3-205ENST00000557884 COL2A1P02458 1487 aaPredicted RBP17.23■□□□□ 0.35
USP3-205ENST00000557884 POLR3DP05423 398 aaPredicted RBP17.22■□□□□ 0.35
USP3-205ENST00000557884 HLA-DOAP06340 250 aa17.22■□□□□ 0.35
USP3-205ENST00000557884 CYP2D6P10635 497 aa17.22■□□□□ 0.35
USP3-205ENST00000557884 INPP5BP32019 993 aa17.22■□□□□ 0.35
USP3-205ENST00000557884 ECE1P42892 770 aa17.22■□□□□ 0.35
USP3-205ENST00000557884 EVX2Q03828 476 aa17.22■□□□□ 0.35
USP3-205ENST00000557884 VGLL4Q14135 290 aa17.22■□□□□ 0.35
USP3-205ENST00000557884 PPP1R3FQ6ZSY5 799 aaPredicted RBP17.22■□□□□ 0.35
USP3-205ENST00000557884 ANKRD13AQ8IZ07 590 aa17.22■□□□□ 0.35
USP3-205ENST00000557884 ZKSCAN4Q969J2 545 aaPredicted RBP17.22■□□□□ 0.35
USP3-205ENST00000557884 SLC10A4Q96EP9 437 aa17.22■□□□□ 0.35
USP3-205ENST00000557884 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.22■□□□□ 0.35
USP3-205ENST00000557884 ATP8A2Q9NTI2 1148 aa17.22■□□□□ 0.35
USP3-205ENST00000557884 PI4KBQ9UBF8 816 aa17.22■□□□□ 0.35
USP3-205ENST00000557884 SLC10A3P09131 477 aa17.21■□□□□ 0.35
USP3-205ENST00000557884 CRACR2BQ8N4Y2 399 aaPredicted RBP17.21■□□□□ 0.35
USP3-205ENST00000557884 TRIM34Q9BYJ4 488 aa17.21■□□□□ 0.35
USP3-205ENST00000557884 DIAPH3Q9NSV4 1193 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms