RNA–Protein interactions for RNA: ENST00000557624.1

RIPK3-206, Transcript of receptor interacting serine/threonine kinase 3, humanhuman

TSL 1 (best)

Gene RIPK3, Length 1,629 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK3-206ENST00000557624 IDI2Q9BXS1 227 aa16.92■□□□□ 0.3
RIPK3-206ENST00000557624 NACAP1Q9BZK3 213 aa16.92■□□□□ 0.3
RIPK3-206ENST00000557624 EPB41L4AQ9HCS5 686 aaPredicted RBP16.92■□□□□ 0.3
RIPK3-206ENST00000557624 DCP1AQ9NPI6 582 aaPredicted RBP16.92■□□□□ 0.3
RIPK3-206ENST00000557624 FAM198AQ9UFP1 575 aa16.92■□□□□ 0.3
RIPK3-206ENST00000557624 SAP30BPQ9UHR5 308 aaKnown RBP16.92■□□□□ 0.3
RIPK3-206ENST00000557624 CLEC11AQ9Y240 323 aa16.92■□□□□ 0.3
RIPK3-206ENST00000557624 MYH1P12882 1939 aa16.91■□□□□ 0.3
RIPK3-206ENST00000557624 TNFAIP1Q13829 316 aa16.91■□□□□ 0.3
RIPK3-206ENST00000557624 DCPSQ96C86 337 aaKnown RBP16.91■□□□□ 0.3
RIPK3-206ENST00000557624 LSG1Q9H089 658 aaKnown RBP16.91■□□□□ 0.3
RIPK3-206ENST00000557624 NAPBQ9H115 298 aa16.91■□□□□ 0.3
RIPK3-206ENST00000557624 ATP8A2Q9NTI2 1148 aa16.91■□□□□ 0.3
RIPK3-206ENST00000557624 MCM9Q9NXL9 1143 aa16.91■□□□□ 0.3
RIPK3-206ENST00000557624 SEC24BO95487 1268 aa16.9■□□□□ 0.3
RIPK3-206ENST00000557624 FKBP1CQ5VVH2 108 aa16.9■□□□□ 0.3
RIPK3-206ENST00000557624 APOBEC3FQ8IUX4 373 aaKnown RBP16.9■□□□□ 0.3
RIPK3-206ENST00000557624 ZFPM1Q8IX07 1006 aa16.9■□□□□ 0.3
RIPK3-206ENST00000557624 IFNL3Q8IZI9 196 aa16.9■□□□□ 0.3
RIPK3-206ENST00000557624 DSCC1Q9BVC3 393 aa16.9■□□□□ 0.3
RIPK3-206ENST00000557624 CNTNAP1P78357 1384 aa16.89■□□□□ 0.29
RIPK3-206ENST00000557624 RPAP1Q9BWH6 1393 aaPredicted RBP16.89■□□□□ 0.29
RIPK3-206ENST00000557624 TNNI2P48788 182 aa16.89■□□□□ 0.29
RIPK3-206ENST00000557624 ZSCAN29Q8IWY8 852 aaPredicted RBP16.89■□□□□ 0.29
RIPK3-206ENST00000557624 ZC3H15Q8WU90 426 aaKnown RBP16.89■□□□□ 0.29
RIPK3-206ENST00000557624 OSBPL5Q9H0X9 879 aaPredicted RBP16.89■□□□□ 0.29
RIPK3-206ENST00000557624 MKRN1Q9UHC7 482 aaKnown RBP16.89■□□□□ 0.29
RIPK3-206ENST00000557624 PALD1Q9ULE6 856 aa16.89■□□□□ 0.29
RIPK3-206ENST00000557624 ENTPD3O75355 529 aa16.88■□□□□ 0.29
RIPK3-206ENST00000557624 FGAP02671 866 aa16.88■□□□□ 0.29
RIPK3-206ENST00000557624 RASA3Q14644 834 aa16.88■□□□□ 0.29
RIPK3-206ENST00000557624 SULF1Q8IWU6 871 aa16.88■□□□□ 0.29
RIPK3-206ENST00000557624 TMEM39BQ9GZU3 492 aa16.88■□□□□ 0.29
RIPK3-206ENST00000557624 DEFB129Q9H1M3 183 aa16.88■□□□□ 0.29
RIPK3-206ENST00000557624 PITPNM2Q9BZ72 1349 aa16.88■□□□□ 0.29
RIPK3-206ENST00000557624 DDX60LQ5H9U9 1706 aaKnown RBP16.88■□□□□ 0.29
RIPK3-206ENST00000557624 CYP2D7A0A087X1C5 515 aa16.88■□□□□ 0.29
RIPK3-206ENST00000557624 USP17L12C9JPN9 530 aa16.88■□□□□ 0.29
RIPK3-206ENST00000557624 USP17L21D6R901 530 aa16.88■□□□□ 0.29
RIPK3-206ENST00000557624 NPM3O75607 178 aaKnown RBP16.88■□□□□ 0.29
RIPK3-206ENST00000557624 GIMAP6Q6P9H5 292 aa16.88■□□□□ 0.29
RIPK3-206ENST00000557624 KRT26Q7Z3Y9 468 aa16.88■□□□□ 0.29
RIPK3-206ENST00000557624 FAM83AQ86UY5 434 aa16.88■□□□□ 0.29
RIPK3-206ENST00000557624 RBM8AQ9Y5S9 174 aaKnown RBP16.88■□□□□ 0.29
RIPK3-206ENST00000557624 ADM5C9JUS6 153 aa16.87■□□□□ 0.29
RIPK3-206ENST00000557624 POLR3DP05423 398 aaPredicted RBP16.87■□□□□ 0.29
RIPK3-206ENST00000557624 CYP2D6P10635 497 aa16.87■□□□□ 0.29
RIPK3-206ENST00000557624 ALX1Q15699 326 aa16.87■□□□□ 0.29
RIPK3-206ENST00000557624 MAP1SQ66K74 1059 aaPredicted RBP16.87■□□□□ 0.29
RIPK3-206ENST00000557624 CTR9Q6PD62 1173 aa16.87■□□□□ 0.29
RIPK3-206ENST00000557624 LDHDQ86WU2 507 aa16.87■□□□□ 0.29
RIPK3-206ENST00000557624 AMOTL1Q8IY63 956 aa16.87■□□□□ 0.29
RIPK3-206ENST00000557624 FAM151AQ8WW52 585 aa16.87■□□□□ 0.29
RIPK3-206ENST00000557624 MAP4K1Q92918 833 aa16.87■□□□□ 0.29
RIPK3-206ENST00000557624 BACH2Q9BYV9 841 aa16.87■□□□□ 0.29
RIPK3-206ENST00000557624 U3KPZ7 1027 aaPredicted RBP16.87■□□□□ 0.29
RIPK3-206ENST00000557624 DDTLA6NHG4 134 aaPredicted RBP16.86■□□□□ 0.29
RIPK3-206ENST00000557624 MINDY4BA8MYZ0 360 aa16.86■□□□□ 0.29
RIPK3-206ENST00000557624 EIF5BO60841 1220 aaKnown RBP16.86■□□□□ 0.29
RIPK3-206ENST00000557624 PRAMEF18Q5VWM3 479 aa16.86■□□□□ 0.29
RIPK3-206ENST00000557624 CDAN1Q8IWY9 1227 aa16.86■□□□□ 0.29
RIPK3-206ENST00000557624 ARPP21Q9UBL0 812 aaPredicted RBP16.86■□□□□ 0.29
RIPK3-206ENST00000557624 PGAP2Q9UHJ9 254 aa16.86■□□□□ 0.29
RIPK3-206ENST00000557624 CTNNA3Q9UI47 895 aa16.86■□□□□ 0.29
RIPK3-206ENST00000557624 ZMYM6O95789 1325 aa16.86■□□□□ 0.29
RIPK3-206ENST00000557624 HAND2P61296 217 aa16.85■□□□□ 0.29
RIPK3-206ENST00000557624 EVX2Q03828 476 aa16.85■□□□□ 0.29
RIPK3-206ENST00000557624 DLK2Q6UY11 383 aa16.85■□□□□ 0.29
RIPK3-206ENST00000557624 SH3BP5LQ7L8J4 393 aa16.85■□□□□ 0.29
RIPK3-206ENST00000557624 USP48Q86UV5 1035 aa16.85■□□□□ 0.29
RIPK3-206ENST00000557624 ZNF784Q8NCA9 323 aaPredicted RBP16.85■□□□□ 0.29
RIPK3-206ENST00000557624 CSRNP1Q96S65 589 aa16.85■□□□□ 0.29
RIPK3-206ENST00000557624 GLIS2Q9BZE0 524 aaPredicted RBP16.85■□□□□ 0.29
RIPK3-206ENST00000557624 LAMB1P07942 1786 aa16.85■□□□□ 0.29
RIPK3-206ENST00000557624 SMIM22K7EJ46 135 aa16.85■□□□□ 0.29
RIPK3-206ENST00000557624 HLA-DOAP06340 250 aa16.85■□□□□ 0.29
RIPK3-206ENST00000557624 PLCD1P51178 756 aa16.85■□□□□ 0.29
RIPK3-206ENST00000557624 STK11IPQ8N1F8 1099 aa16.85■□□□□ 0.29
RIPK3-206ENST00000557624 USP26Q9BXU7 913 aa16.85■□□□□ 0.29
RIPK3-206ENST00000557624 DHX36Q9H2U1 1008 aaKnown RBP16.85■□□□□ 0.29
RIPK3-206ENST00000557624 ATRNL1Q5VV63 1379 aa16.84■□□□□ 0.29
RIPK3-206ENST00000557624 COL2A1P02458 1487 aaPredicted RBP16.84■□□□□ 0.29
RIPK3-206ENST00000557624 KIF3CO14782 793 aa16.84■□□□□ 0.29
RIPK3-206ENST00000557624 PPARAQ07869 468 aa16.84■□□□□ 0.29
RIPK3-206ENST00000557624 IMMTQ16891 758 aaKnown RBP16.84■□□□□ 0.29
RIPK3-206ENST00000557624 SBK1Q52WX2 424 aa16.84■□□□□ 0.29
RIPK3-206ENST00000557624 C12orf60Q5U649 245 aa16.84■□□□□ 0.29
RIPK3-206ENST00000557624 CDC37L1Q7L3B6 337 aa16.84■□□□□ 0.29
RIPK3-206ENST00000557624 TTC6Q86TZ1 520 aa16.84■□□□□ 0.29
RIPK3-206ENST00000557624 PPP2R3BQ9Y5P8 575 aa16.84■□□□□ 0.29
RIPK3-206ENST00000557624 LAMA4Q16363 1823 aa16.83■□□□□ 0.29
RIPK3-206ENST00000557624 ZNF213O14771 459 aa16.83■□□□□ 0.28
RIPK3-206ENST00000557624 CTDSPL2Q05D32 466 aa16.83■□□□□ 0.28
RIPK3-206ENST00000557624 TEPSINQ96N21 525 aa16.83■□□□□ 0.28
RIPK3-206ENST00000557624 SIPA1L1O43166 1804 aa16.82■□□□□ 0.28
RIPK3-206ENST00000557624 NBPF12Q5TAG4 269 aaPredicted RBP16.82■□□□□ 0.28
RIPK3-206ENST00000557624 CHADLQ6NUI6 762 aa16.82■□□□□ 0.28
RIPK3-206ENST00000557624 CRACR2BQ8N4Y2 399 aaPredicted RBP16.82■□□□□ 0.28
RIPK3-206ENST00000557624 DYNLL2Q96FJ2 89 aa16.82■□□□□ 0.28
RIPK3-206ENST00000557624 UPF2Q9HAU5 1272 aaKnown RBP16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms