RNA–Protein interactions for RNA: ENST00000557466.1

VIPAS39-210, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 4

Gene VIPAS39, Length 533 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-210ENST00000557466 HTRA3P83110 453 aa17.92■□□□□ 0.46
VIPAS39-210ENST00000557466 LRRFIP1Q32MZ4 808 aaKnown RBP17.92■□□□□ 0.46
VIPAS39-210ENST00000557466 TGFBRAP1Q8WUH2 860 aa17.92■□□□□ 0.46
VIPAS39-210ENST00000557466 RILPL2Q969X0 211 aa17.92■□□□□ 0.46
VIPAS39-210ENST00000557466 PUS7LQ9H0K6 701 aaKnown RBP17.92■□□□□ 0.46
VIPAS39-210ENST00000557466 ARMT1Q9H993 441 aa17.92■□□□□ 0.46
VIPAS39-210ENST00000557466 GBA2Q9HCG7 927 aaPredicted RBP17.92■□□□□ 0.46
VIPAS39-210ENST00000557466 CREBZFQ9NS37 354 aa17.92■□□□□ 0.46
VIPAS39-210ENST00000557466 FLT1P17948 1338 aa17.92■□□□□ 0.46
VIPAS39-210ENST00000557466 NPM3O75607 178 aaKnown RBP17.91■□□□□ 0.46
VIPAS39-210ENST00000557466 NF2P35240 595 aa17.91■□□□□ 0.46
VIPAS39-210ENST00000557466 SH3BP5LQ7L8J4 393 aa17.91■□□□□ 0.46
VIPAS39-210ENST00000557466 MAPKAPK5Q8IW41 473 aa17.91■□□□□ 0.46
VIPAS39-210ENST00000557466 OSBP2Q969R2 916 aa17.91■□□□□ 0.46
VIPAS39-210ENST00000557466 OSBPL5Q9H0X9 879 aaPredicted RBP17.91■□□□□ 0.46
VIPAS39-210ENST00000557466 FZD1Q9UP38 647 aa17.91■□□□□ 0.46
VIPAS39-210ENST00000557466 ATRNL1Q5VV63 1379 aa17.91■□□□□ 0.46
VIPAS39-210ENST00000557466 LAMB1P07942 1786 aa17.9■□□□□ 0.46
VIPAS39-210ENST00000557466 M0R2C6 588 aa17.9■□□□□ 0.46
VIPAS39-210ENST00000557466 SUPT20HL1Q3ZLR7 823 aa17.9■□□□□ 0.46
VIPAS39-210ENST00000557466 ZMYM1Q5SVZ6 1142 aa17.9■□□□□ 0.46
VIPAS39-210ENST00000557466 MOB2Q70IA6 237 aa17.9■□□□□ 0.46
VIPAS39-210ENST00000557466 CRNKL1Q9BZJ0 848 aaKnown RBP17.9■□□□□ 0.46
VIPAS39-210ENST00000557466 TLL2Q9Y6L7 1015 aa17.9■□□□□ 0.46
VIPAS39-210ENST00000557466 DDTLA6NHG4 134 aaPredicted RBP17.89■□□□□ 0.45
VIPAS39-210ENST00000557466 USP5P45974 858 aa17.89■□□□□ 0.45
VIPAS39-210ENST00000557466 PRKG1Q13976 671 aa17.89■□□□□ 0.45
VIPAS39-210ENST00000557466 C2orf69Q8N8R5 385 aa17.89■□□□□ 0.45
VIPAS39-210ENST00000557466 AIDAQ96BJ3 306 aa17.89■□□□□ 0.45
VIPAS39-210ENST00000557466 SEC62Q99442 399 aaKnown RBP17.89■□□□□ 0.45
VIPAS39-210ENST00000557466 ABT1Q9ULW3 272 aaKnown RBP17.89■□□□□ 0.45
VIPAS39-210ENST00000557466 PRKAB2O43741 272 aa17.88■□□□□ 0.45
VIPAS39-210ENST00000557466 SDSP20132 328 aa17.88■□□□□ 0.45
VIPAS39-210ENST00000557466 FKBP1BP68106 108 aa17.88■□□□□ 0.45
VIPAS39-210ENST00000557466 TTLL12Q14166 644 aaPredicted RBP17.88■□□□□ 0.45
VIPAS39-210ENST00000557466 SAPCD2Q86UD0 394 aa17.88■□□□□ 0.45
VIPAS39-210ENST00000557466 ZSCAN29Q8IWY8 852 aaPredicted RBP17.88■□□□□ 0.45
VIPAS39-210ENST00000557466 SDR42E1Q8WUS8 393 aa17.88■□□□□ 0.45
VIPAS39-210ENST00000557466 ATAD5Q96QE3 1844 aa17.87■□□□□ 0.45
VIPAS39-210ENST00000557466 A0A0D9SFI3 127 aa17.87■□□□□ 0.45
VIPAS39-210ENST00000557466 GPAA1O43292 621 aa17.87■□□□□ 0.45
VIPAS39-210ENST00000557466 FAM227BQ96M60 508 aa17.87■□□□□ 0.45
VIPAS39-210ENST00000557466 CSRNP1Q96S65 589 aa17.87■□□□□ 0.45
VIPAS39-210ENST00000557466 SAP30BPQ9UHR5 308 aaKnown RBP17.87■□□□□ 0.45
VIPAS39-210ENST00000557466 ANGEL1Q9UNK9 670 aaKnown RBP17.87■□□□□ 0.45
VIPAS39-210ENST00000557466 DOCK1Q14185 1865 aa17.86■□□□□ 0.45
VIPAS39-210ENST00000557466 HUNKP57058 714 aa17.86■□□□□ 0.45
VIPAS39-210ENST00000557466 NMIQ13287 307 aaPredicted RBP17.86■□□□□ 0.45
VIPAS39-210ENST00000557466 ARMC9Q7Z3E5 817 aa17.86■□□□□ 0.45
VIPAS39-210ENST00000557466 TICAM2Q86XR7 235 aa17.86■□□□□ 0.45
VIPAS39-210ENST00000557466 STRBPQ96SI9 672 aaKnown RBP17.86■□□□□ 0.45
VIPAS39-210ENST00000557466 MKRN1Q9UHC7 482 aaKnown RBP17.86■□□□□ 0.45
VIPAS39-210ENST00000557466 MYH8P13535 1937 aa17.86■□□□□ 0.45
VIPAS39-210ENST00000557466 RASSF10A6NK89 507 aa17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 UBE2Q2LH0YL09 131 aa17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 PPP1R12BO60237 982 aaPredicted RBP17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 USP2O75604 605 aaPredicted RBP17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 SLURP2P0DP57 97 aa17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 MAP3K11Q16584 847 aa17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 SLC4A8Q2Y0W8 1093 aa17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 DCAF15Q66K64 600 aa17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 CCDC129Q6ZRS4 1044 aa17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 MIGA2Q7L4E1 593 aa17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 HOOK2Q96ED9 719 aa17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 THSD7BQ9C0I4 1608 aa17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 DCP1AQ9NPI6 582 aaPredicted RBP17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 PALD1Q9ULE6 856 aa17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 SLC4A4Q9Y6R1 1079 aa17.85■□□□□ 0.45
VIPAS39-210ENST00000557466 DHX36Q9H2U1 1008 aaKnown RBP17.84■□□□□ 0.45
VIPAS39-210ENST00000557466 HELLSQ9NRZ9 838 aa17.84■□□□□ 0.45
VIPAS39-210ENST00000557466 DIAPH3Q9NSV4 1193 aa17.84■□□□□ 0.45
VIPAS39-210ENST00000557466 FAM196BA6NMK8 535 aa17.83■□□□□ 0.44
VIPAS39-210ENST00000557466 IREB2P48200 963 aaKnown RBP17.83■□□□□ 0.44
VIPAS39-210ENST00000557466 LDLRAD1Q5T700 205 aa17.83■□□□□ 0.44
VIPAS39-210ENST00000557466 ZNF341Q9BYN7 854 aa17.83■□□□□ 0.44
VIPAS39-210ENST00000557466 ATP8A2Q9NTI2 1148 aa17.83■□□□□ 0.44
VIPAS39-210ENST00000557466 GSG1L2A8MUP6 293 aa17.82■□□□□ 0.44
VIPAS39-210ENST00000557466 HIP1O00291 1037 aa17.82■□□□□ 0.44
VIPAS39-210ENST00000557466 EVX2Q03828 476 aa17.82■□□□□ 0.44
VIPAS39-210ENST00000557466 BMP2KLQ5H9B9 411 aa17.82■□□□□ 0.44
VIPAS39-210ENST00000557466 ZNF589Q86UQ0 364 aaPredicted RBP17.82■□□□□ 0.44
VIPAS39-210ENST00000557466 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.82■□□□□ 0.44
VIPAS39-210ENST00000557466 KLRG1Q96E93 195 aa17.82■□□□□ 0.44
VIPAS39-210ENST00000557466 HHIPL1Q96JK4 782 aa17.82■□□□□ 0.44
VIPAS39-210ENST00000557466 EPB41L4AQ9HCS5 686 aaPredicted RBP17.82■□□□□ 0.44
VIPAS39-210ENST00000557466 MCM9Q9NXL9 1143 aa17.82■□□□□ 0.44
VIPAS39-210ENST00000557466 CCDC171Q6TFL3 1326 aa17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 FOXP2O15409 715 aa17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 HLA-DOAP06340 250 aa17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 CYP2D6P10635 497 aa17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 GNAT2P19087 354 aa17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 MAP3K10Q02779 954 aa17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 DEFB115Q30KQ5 88 aa17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 MCMDC2Q4G0Z9 681 aa17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 RGMBQ6NW40 437 aa17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 CWC27Q6UX04 472 aaKnown RBP17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 PAXIP1Q6ZW49 1069 aaPredicted RBP17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 CLMNQ96JQ2 1002 aa17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 WRNIP1Q96S55 665 aa17.81■□□□□ 0.44
VIPAS39-210ENST00000557466 DNAJC18Q9H819 358 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms