RNA–Protein interactions for RNA: ENST00000557437.1

SEC23A-214, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4

Gene SEC23A, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-214ENST00000557437 SIRT2Q8IXJ6 389 aa18.38■□□□□ 0.53
SEC23A-214ENST00000557437 CCDC8Q9H0W5 538 aaPredicted RBP18.38■□□□□ 0.53
SEC23A-214ENST00000557437 SNRKQ9NRH2 765 aa18.38■□□□□ 0.53
SEC23A-214ENST00000557437 CCL15-CCL14A0A0B4J2E2 113 aa18.37■□□□□ 0.53
SEC23A-214ENST00000557437 FKTNO75072 461 aa18.37■□□□□ 0.53
SEC23A-214ENST00000557437 PPIL2Q13356 520 aa18.37■□□□□ 0.53
SEC23A-214ENST00000557437 PDE3AQ14432 1141 aa18.37■□□□□ 0.53
SEC23A-214ENST00000557437 CCL15Q16663 113 aa18.37■□□□□ 0.53
SEC23A-214ENST00000557437 NOL9Q5SY16 702 aaKnown RBP18.37■□□□□ 0.53
SEC23A-214ENST00000557437 RAI14Q9P0K7 980 aa18.37■□□□□ 0.53
SEC23A-214ENST00000557437 LRP2BPQ9P2M1 347 aa18.37■□□□□ 0.53
SEC23A-214ENST00000557437 DOCK2Q92608 1830 aa18.37■□□□□ 0.53
SEC23A-214ENST00000557437 DDTLA6NHG4 134 aaPredicted RBP18.36■□□□□ 0.53
SEC23A-214ENST00000557437 PHF20L1A8MW92 1017 aa18.36■□□□□ 0.53
SEC23A-214ENST00000557437 IRF6O14896 467 aa18.36■□□□□ 0.53
SEC23A-214ENST00000557437 COL2A1P02458 1487 aaPredicted RBP18.36■□□□□ 0.53
SEC23A-214ENST00000557437 PPATQ06203 517 aa18.36■□□□□ 0.53
SEC23A-214ENST00000557437 CRHR2Q13324 411 aa18.36■□□□□ 0.53
SEC23A-214ENST00000557437 HSP90AB4PQ58FF6 505 aa18.36■□□□□ 0.53
SEC23A-214ENST00000557437 MAST2Q6P0Q8 1798 aa18.36■□□□□ 0.53
SEC23A-214ENST00000557437 CCDC85CA6NKD9 419 aa18.35■□□□□ 0.53
SEC23A-214ENST00000557437 ZAP70P43403 619 aa18.35■□□□□ 0.53
SEC23A-214ENST00000557437 PKN2Q16513 984 aaKnown RBP18.35■□□□□ 0.53
SEC23A-214ENST00000557437 C20orf194Q5TEA3 1177 aa18.35■□□□□ 0.53
SEC23A-214ENST00000557437 FAM43AQ8N2R8 423 aa18.35■□□□□ 0.53
SEC23A-214ENST00000557437 RHPN1Q8TCX5 695 aa18.35■□□□□ 0.53
SEC23A-214ENST00000557437 CHMP4BQ9H444 224 aaKnown RBP18.35■□□□□ 0.53
SEC23A-214ENST00000557437 AK9Q5TCS8 1911 aa18.34■□□□□ 0.53
SEC23A-214ENST00000557437 CETPP11597 493 aa18.34■□□□□ 0.53
SEC23A-214ENST00000557437 PPP4CP60510 307 aa18.34■□□□□ 0.53
SEC23A-214ENST00000557437 SNAPC2Q13487 334 aa18.34■□□□□ 0.53
SEC23A-214ENST00000557437 ZCCHC17Q9NP64 241 aaKnown RBP18.34■□□□□ 0.53
SEC23A-214ENST00000557437 PIH1D3Q9NQM4 214 aaKnown RBP18.34■□□□□ 0.53
SEC23A-214ENST00000557437 KCNH4Q9UQ05 1017 aa18.34■□□□□ 0.53
SEC23A-214ENST00000557437 TBC1D12O60347 775 aa18.33■□□□□ 0.52
SEC23A-214ENST00000557437 HMMRO75330 724 aa18.33■□□□□ 0.52
SEC23A-214ENST00000557437 RGS19P49795 217 aa18.33■□□□□ 0.52
SEC23A-214ENST00000557437 PICALMQ13492 652 aa18.33■□□□□ 0.52
SEC23A-214ENST00000557437 NAA16Q6N069 864 aaPredicted RBP18.33■□□□□ 0.52
SEC23A-214ENST00000557437 ADGRA1Q86SQ6 560 aa18.33■□□□□ 0.52
SEC23A-214ENST00000557437 SLURP2P0DP57 97 aa18.32■□□□□ 0.52
SEC23A-214ENST00000557437 AACSQ86V21 672 aa18.32■□□□□ 0.52
SEC23A-214ENST00000557437 ZSCAN29Q8IWY8 852 aaPredicted RBP18.32■□□□□ 0.52
SEC23A-214ENST00000557437 GOLGA6L2Q8N9W4 650 aaPredicted RBP18.32■□□□□ 0.52
SEC23A-214ENST00000557437 KIF1BPQ96EK5 621 aa18.32■□□□□ 0.52
SEC23A-214ENST00000557437 IL1RAPL2Q9NP60 686 aa18.32■□□□□ 0.52
SEC23A-214ENST00000557437 MYO5AQ9Y4I1 1855 aaKnown RBP18.32■□□□□ 0.52
SEC23A-214ENST00000557437 HTTP42858 3142 aa18.31■□□□□ 0.52
SEC23A-214ENST00000557437 BTBD19C9JJ37 291 aa18.31■□□□□ 0.52
SEC23A-214ENST00000557437 MOGSQ13724 837 aa18.31■□□□□ 0.52
SEC23A-214ENST00000557437 SCYL3Q8IZE3 742 aa18.31■□□□□ 0.52
SEC23A-214ENST00000557437 SH3RF3Q8TEJ3 882 aaPredicted RBP18.31■□□□□ 0.52
SEC23A-214ENST00000557437 OSBPL5Q9H0X9 879 aaPredicted RBP18.31■□□□□ 0.52
SEC23A-214ENST00000557437 AATFQ9NY61 560 aaKnown RBP eCLIP18.31■□□□□ 0.52
SEC23A-214ENST00000557437 HPS5Q9UPZ3 1129 aa18.31■□□□□ 0.52
SEC23A-214ENST00000557437 RAB11FIP3O75154 756 aa18.3■□□□□ 0.52
SEC23A-214ENST00000557437 BAG3O95817 575 aa18.3■□□□□ 0.52
SEC23A-214ENST00000557437 TAF1CQ15572 869 aaPredicted RBP18.3■□□□□ 0.52
SEC23A-214ENST00000557437 FBXO46Q6PJ61 603 aaPredicted RBP18.3■□□□□ 0.52
SEC23A-214ENST00000557437 TEX11Q8IYF3 940 aa18.3■□□□□ 0.52
SEC23A-214ENST00000557437 ZFYVE28Q9HCC9 887 aa18.3■□□□□ 0.52
SEC23A-214ENST00000557437 CXCL11O14625 94 aa18.29■□□□□ 0.52
SEC23A-214ENST00000557437 CTNND1O60716 968 aaKnown RBP18.29■□□□□ 0.52
SEC23A-214ENST00000557437 PLCG2P16885 1265 aa18.29■□□□□ 0.52
SEC23A-214ENST00000557437 PTPRAP18433 802 aa18.29■□□□□ 0.52
SEC23A-214ENST00000557437 SP3Q02447 781 aa18.29■□□□□ 0.52
SEC23A-214ENST00000557437 TMED8Q6PL24 325 aaPredicted RBP18.29■□□□□ 0.52
SEC23A-214ENST00000557437 OTOP1Q7RTM1 612 aa18.29■□□□□ 0.52
SEC23A-214ENST00000557437 CLASRPQ8N2M8 674 aaKnown RBP18.29■□□□□ 0.52
SEC23A-214ENST00000557437 ERO1AQ96HE7 468 aa18.29■□□□□ 0.52
SEC23A-214ENST00000557437 ANTXR1Q9H6X2 564 aa18.29■□□□□ 0.52
SEC23A-214ENST00000557437 NDUFB9Q9Y6M9 179 aa18.29■□□□□ 0.52
SEC23A-214ENST00000557437 CAP1Q01518 475 aa18.28■□□□□ 0.52
SEC23A-214ENST00000557437 ANKRD23Q86SG2 305 aa18.28■□□□□ 0.52
SEC23A-214ENST00000557437 PPIL4Q8WUA2 492 aaKnown RBP eCLIP18.28■□□□□ 0.52
SEC23A-214ENST00000557437 NOL10Q9BSC4 688 aaKnown RBP18.28■□□□□ 0.52
SEC23A-214ENST00000557437 FOCADQ5VW36 1801 aa18.28■□□□□ 0.52
SEC23A-214ENST00000557437 DOCK1Q14185 1865 aa18.27■□□□□ 0.52
SEC23A-214ENST00000557437 CDK5RAP2Q96SN8 1893 aa18.27■□□□□ 0.52
SEC23A-214ENST00000557437 TLR2O60603 784 aa18.27■□□□□ 0.52
SEC23A-214ENST00000557437 METTL16Q86W50 562 aaKnown RBP18.27■□□□□ 0.52
SEC23A-214ENST00000557437 CD99L2Q8TCZ2 262 aa18.27■□□□□ 0.52
SEC23A-214ENST00000557437 DHX36Q9H2U1 1008 aaKnown RBP18.27■□□□□ 0.52
SEC23A-214ENST00000557437 PICK1Q9NRD5 415 aa18.27■□□□□ 0.52
SEC23A-214ENST00000557437 AFG3L2Q9Y4W6 797 aa18.27■□□□□ 0.52
SEC23A-214ENST00000557437 TRIM17Q9Y577 477 aa18.27■□□□□ 0.52
SEC23A-214ENST00000557437 ZHX2Q9Y6X8 837 aa18.27■□□□□ 0.52
SEC23A-214ENST00000557437 FLT1P17948 1338 aa18.26■□□□□ 0.51
SEC23A-214ENST00000557437 SIPA1L1O43166 1804 aa18.26■□□□□ 0.51
SEC23A-214ENST00000557437 PHIPQ8WWQ0 1821 aa18.26■□□□□ 0.51
SEC23A-214ENST00000557437 A0A0G2JLL6 359 aaPredicted RBP18.26■□□□□ 0.51
SEC23A-214ENST00000557437 IDH1O75874 414 aaKnown RBP18.26■□□□□ 0.51
SEC23A-214ENST00000557437 CYP7A1P22680 504 aa18.26■□□□□ 0.51
SEC23A-214ENST00000557437 GPAT2Q6NUI2 795 aa18.26■□□□□ 0.51
SEC23A-214ENST00000557437 PRRT2Q7Z6L0 340 aaPredicted RBP18.26■□□□□ 0.51
SEC23A-214ENST00000557437 TGFBRAP1Q8WUH2 860 aa18.26■□□□□ 0.51
SEC23A-214ENST00000557437 XPO5Q9HAV4 1204 aaKnown RBP eCLIP18.26■□□□□ 0.51
SEC23A-214ENST00000557437 HERC5Q9UII4 1024 aaKnown RBP18.26■□□□□ 0.51
SEC23A-214ENST00000557437 ADGRA2Q96PE1 1338 aa18.25■□□□□ 0.51
SEC23A-214ENST00000557437 FAM196BA6NMK8 535 aa18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms