RNA–Protein interactions for RNA: ENST00000557033.1

HNRNPC-228, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 3

Gene HNRNPC, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-228ENST00000557033 AGBL3Q8NEM8 1001 aa12.38□□□□□ -0.43
HNRNPC-228ENST00000557033 C1orf216Q8TAB5 229 aa12.38□□□□□ -0.43
HNRNPC-228ENST00000557033 SRCIN1Q9C0H9 1055 aa12.38□□□□□ -0.43
HNRNPC-228ENST00000557033 C9orf78Q9NZ63 289 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-228ENST00000557033 BIN2Q9UBW5 565 aaPredicted RBP12.38□□□□□ -0.43
HNRNPC-228ENST00000557033 MED23Q9ULK4 1368 aa12.38□□□□□ -0.43
HNRNPC-228ENST00000557033 ANKRD33BA6NCL7 494 aa12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 TRAF5O00463 557 aa12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 VEGFBP49765 207 aa12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 MCCD1P59942 119 aaPredicted RBP12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 DPYDQ12882 1025 aa12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 PUS10Q3MIT2 529 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 IFFO2Q5TF58 517 aa12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 SLC4A10Q6U841 1118 aa12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 NPAS4Q8IUM7 802 aa12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 TRMT2AQ8IZ69 625 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 TRPM4Q8TD43 1214 aa12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 SLC4A5Q9BY07 1137 aa12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 COA1Q9GZY4 146 aa12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 ABT1Q9ULW3 272 aaKnown RBP12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 ZNF609O15014 1411 aa12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 ZNF804BA4D1E1 1349 aa12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 PTPRCP08575 1304 aa12.37□□□□□ -0.43
HNRNPC-228ENST00000557033 TRPM7Q96QT4 1865 aa12.36□□□□□ -0.43
HNRNPC-228ENST00000557033 SHTN1A0MZ66 631 aa12.36□□□□□ -0.43
HNRNPC-228ENST00000557033 HSPA1AP0DMV8 641 aaKnown RBP12.36□□□□□ -0.43
HNRNPC-228ENST00000557033 HSPA1BP0DMV9 641 aaKnown RBP12.36□□□□□ -0.43
HNRNPC-228ENST00000557033 SCNN1AP37088 669 aa12.36□□□□□ -0.43
HNRNPC-228ENST00000557033 MMP14P50281 582 aa12.36□□□□□ -0.43
HNRNPC-228ENST00000557033 ZNF280AP59817 542 aaPredicted RBP12.36□□□□□ -0.43
HNRNPC-228ENST00000557033 CCDC57Q2TAC2 916 aa12.36□□□□□ -0.43
HNRNPC-228ENST00000557033 ALDH1L2Q3SY69 923 aa12.36□□□□□ -0.43
HNRNPC-228ENST00000557033 LMBR1LQ6UX01 489 aa12.36□□□□□ -0.43
HNRNPC-228ENST00000557033 PLPP7Q8NBV4 271 aa12.36□□□□□ -0.43
HNRNPC-228ENST00000557033 SPEF2Q9C093 1822 aa12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 WTIPA6NIX2 430 aaPredicted RBP12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 CT47B1P0C2W7 299 aaPredicted RBP12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 HOXB1P14653 301 aaPredicted RBP12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 TCF3P15923 654 aa12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 ECE1P42892 770 aa12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 PSEN2P49810 448 aa12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 FMR1Q06787 632 aaKnown RBP eCLIP12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 CHRNDQ07001 517 aa12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 TBC1D10BQ4KMP7 808 aaPredicted RBP12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 RNF135Q8IUD6 432 aa12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 SSH1Q8WYL5 1049 aa12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 ZNF592Q92610 1267 aa12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 DCPSQ96C86 337 aaKnown RBP12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 GMLQ99445 158 aa12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 GLIS2Q9BZE0 524 aaPredicted RBP12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 TLL2Q9Y6L7 1015 aa12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 SCN9AQ15858 1988 aa12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 UTYO14607 1347 aa12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 WDR33Q9C0J8 1336 aaKnown RBP12.35□□□□□ -0.43
HNRNPC-228ENST00000557033 PSME4Q14997 1843 aa12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 CELF2O95319 508 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 EGFRP00533 1210 aa12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 KCNJ4P48050 445 aa12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 KIF4BQ2VIQ3 1234 aa12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 EPHA10Q5JZY3 1008 aa12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 STRIP1Q5VSL9 837 aa12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 C15orf52Q6ZUT6 534 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 USP48Q86UV5 1035 aa12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 OGFOD1Q8N543 542 aa12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 HHIPL1Q96JK4 782 aa12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 USB1Q9BQ65 265 aaKnown RBP12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 CHMP3Q9Y3E7 222 aa12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 MYO3BQ8WXR4 1341 aa12.34□□□□□ -0.43
HNRNPC-228ENST00000557033 ACTN4O43707 911 aaKnown RBP12.33□□□□□ -0.44
HNRNPC-228ENST00000557033 KCNH2Q12809 1159 aa12.33□□□□□ -0.44
HNRNPC-228ENST00000557033 MAP7D1Q3KQU3 841 aa12.33□□□□□ -0.44
HNRNPC-228ENST00000557033 TAF7LQ5H9L4 462 aa12.33□□□□□ -0.44
HNRNPC-228ENST00000557033 DACT2Q5SW24 774 aa12.33□□□□□ -0.44
HNRNPC-228ENST00000557033 LDHAL6AQ6ZMR3 332 aa12.33□□□□□ -0.44
HNRNPC-228ENST00000557033 SAPCD2Q86UD0 394 aa12.33□□□□□ -0.44
HNRNPC-228ENST00000557033 TXNRD3Q86VQ6 643 aa12.33□□□□□ -0.44
HNRNPC-228ENST00000557033 MAP10Q9P2G4 905 aa12.33□□□□□ -0.44
HNRNPC-228ENST00000557033 GPSM3Q9Y4H4 160 aa12.33□□□□□ -0.44
HNRNPC-228ENST00000557033 NBPF7P0C2Y1 421 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-228ENST00000557033 VAMP1P23763 118 aa12.32□□□□□ -0.44
HNRNPC-228ENST00000557033 MAP2K1Q02750 393 aaPredicted RBP12.32□□□□□ -0.44
HNRNPC-228ENST00000557033 TTLL5Q6EMB2 1281 aa12.32□□□□□ -0.44
HNRNPC-228ENST00000557033 BLOC1S3Q6QNY0 202 aa12.32□□□□□ -0.44
HNRNPC-228ENST00000557033 RNF19BQ6ZMZ0 732 aa12.32□□□□□ -0.44
HNRNPC-228ENST00000557033 KRT26Q7Z3Y9 468 aa12.32□□□□□ -0.44
HNRNPC-228ENST00000557033 KAZALD1Q96I82 304 aa12.32□□□□□ -0.44
HNRNPC-228ENST00000557033 MYOZ2Q9NPC6 264 aa12.32□□□□□ -0.44
HNRNPC-228ENST00000557033 WBP1LQ9NX94 342 aa12.32□□□□□ -0.44
HNRNPC-228ENST00000557033 PCNTO95613 3336 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 TAF5LO75529 589 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 MAP2K2P36507 400 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 CLDN10P78369 228 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 PTK2Q05397 1052 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 SCARF1Q14162 830 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 EML3Q32P44 896 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 RABL6Q3YEC7 729 aaPredicted RBP12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 COL13A1Q5TAT6 717 aaPredicted RBP12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 BRICD5Q6PL45 260 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 TRAF7Q6Q0C0 670 aa12.31□□□□□ -0.44
HNRNPC-228ENST00000557033 AIDAQ96BJ3 306 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 92.6 ms