RNA–Protein interactions for RNA: ENST00000556810.5

TMEM260-212, Transcript of transmembrane protein 260, humanhuman

TSL 3

Gene TMEM260, Length 662 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-212ENST00000556810 FAM13BQ9NYF5 915 aa7.93□□□□□ -1.14
TMEM260-212ENST00000556810 SERPINA10Q9UK55 444 aa7.93□□□□□ -1.14
TMEM260-212ENST00000556810 ADAMTS13Q76LX8 1427 aa7.93□□□□□ -1.14
TMEM260-212ENST00000556810 NRXN3Q9Y4C0 1643 aa7.92□□□□□ -1.14
TMEM260-212ENST00000556810 PIK3R5Q8WYR1 880 aa7.92□□□□□ -1.14
TMEM260-212ENST00000556810 PNNQ9H307 717 aaKnown RBP7.92□□□□□ -1.14
TMEM260-212ENST00000556810 AFF2P51816 1311 aa7.92□□□□□ -1.14
TMEM260-212ENST00000556810 SRCAPQ6ZRS2 3230 aa7.92□□□□□ -1.14
TMEM260-212ENST00000556810 GHRHP01286 108 aa7.91□□□□□ -1.14
TMEM260-212ENST00000556810 PPP2R1AP30153 589 aa7.91□□□□□ -1.14
TMEM260-212ENST00000556810 SAFB2Q14151 953 aaKnown RBP eCLIP7.91□□□□□ -1.14
TMEM260-212ENST00000556810 ZMYM1Q5SVZ6 1142 aa7.91□□□□□ -1.14
TMEM260-212ENST00000556810 ERICH6BQ5W0A0 696 aa7.91□□□□□ -1.14
TMEM260-212ENST00000556810 LRRC59Q96AG4 307 aaKnown RBP7.91□□□□□ -1.14
TMEM260-212ENST00000556810 RBSNQ9H1K0 784 aa7.91□□□□□ -1.14
TMEM260-212ENST00000556810 SLC12A5Q9H2X9 1139 aa7.91□□□□□ -1.14
TMEM260-212ENST00000556810 PTPRUQ92729 1446 aa7.91□□□□□ -1.14
TMEM260-212ENST00000556810 ATP7BP35670 1465 aa7.91□□□□□ -1.14
TMEM260-212ENST00000556810 TULP4Q9NRJ4 1543 aa7.91□□□□□ -1.14
TMEM260-212ENST00000556810 ANKRD26Q9UPS8 1709 aa7.9□□□□□ -1.14
TMEM260-212ENST00000556810 NSD3Q9BZ95 1437 aa7.9□□□□□ -1.14
TMEM260-212ENST00000556810 H2AFB1P0C5Y9 115 aa7.9□□□□□ -1.14
TMEM260-212ENST00000556810 H2AFB2P0C5Z0 115 aa7.9□□□□□ -1.14
TMEM260-212ENST00000556810 PDIA4P13667 645 aaKnown RBP7.9□□□□□ -1.14
TMEM260-212ENST00000556810 ZAP70P43403 619 aa7.9□□□□□ -1.14
TMEM260-212ENST00000556810 DDX17Q92841 729 aaKnown RBP7.9□□□□□ -1.14
TMEM260-212ENST00000556810 C8orf37Q96NL8 207 aa7.9□□□□□ -1.14
TMEM260-212ENST00000556810 STIM2Q9P246 746 aa7.9□□□□□ -1.14
TMEM260-212ENST00000556810 ITSN1Q15811 1721 aa7.89□□□□□ -1.15
TMEM260-212ENST00000556810 CDK12Q9NYV4 1490 aaPredicted RBP7.89□□□□□ -1.15
TMEM260-212ENST00000556810 POLR3AO14802 1390 aaPredicted RBP7.89□□□□□ -1.15
TMEM260-212ENST00000556810 ATP2B4P23634 1241 aa7.89□□□□□ -1.15
TMEM260-212ENST00000556810 RBM6P78332 1123 aaKnown RBP7.89□□□□□ -1.15
TMEM260-212ENST00000556810 CCDC184Q52MB2 194 aa7.89□□□□□ -1.15
TMEM260-212ENST00000556810 ABTB2Q8N961 1025 aa7.89□□□□□ -1.15
TMEM260-212ENST00000556810 NUDCQ9Y266 331 aa7.89□□□□□ -1.15
TMEM260-212ENST00000556810 ADGRB2O60241 1585 aa7.88□□□□□ -1.15
TMEM260-212ENST00000556810 PTCH1Q13635 1447 aa7.88□□□□□ -1.15
TMEM260-212ENST00000556810 METP08581 1390 aa7.88□□□□□ -1.15
TMEM260-212ENST00000556810 KIF20BQ96Q89 1820 aa7.88□□□□□ -1.15
TMEM260-212ENST00000556810 DEAF1O75398 565 aaPredicted RBP7.88□□□□□ -1.15
TMEM260-212ENST00000556810 PRSS36Q5K4E3 855 aa7.88□□□□□ -1.15
TMEM260-212ENST00000556810 GDF6Q6KF10 455 aaPredicted RBP7.88□□□□□ -1.15
TMEM260-212ENST00000556810 IGF2-ASQ6U949 168 aa7.88□□□□□ -1.15
TMEM260-212ENST00000556810 WAPLQ7Z5K2 1190 aa7.88□□□□□ -1.15
TMEM260-212ENST00000556810 GPR152Q8TDT2 470 aa7.88□□□□□ -1.15
TMEM260-212ENST00000556810 WFDC12Q8WWY7 111 aa7.88□□□□□ -1.15
TMEM260-212ENST00000556810 TP53INP1Q96A56 240 aa7.88□□□□□ -1.15
TMEM260-212ENST00000556810 SSBP4Q9BWG4 385 aaPredicted RBP7.88□□□□□ -1.15
TMEM260-212ENST00000556810 FNDC3AQ9Y2H6 1198 aaKnown RBP7.88□□□□□ -1.15
TMEM260-212ENST00000556810 NEFMP07197 916 aa7.87□□□□□ -1.15
TMEM260-212ENST00000556810 IL22RA1Q8N6P7 574 aa7.87□□□□□ -1.15
TMEM260-212ENST00000556810 OR13H1Q8NG92 308 aa7.87□□□□□ -1.15
TMEM260-212ENST00000556810 NUDT16Q96DE0 195 aaKnown RBP7.87□□□□□ -1.15
TMEM260-212ENST00000556810 NHSL1Q5SYE7 1610 aa7.87□□□□□ -1.15
TMEM260-212ENST00000556810 RGS12O14924 1447 aa7.86□□□□□ -1.15
TMEM260-212ENST00000556810 DCCP43146 1447 aa7.86□□□□□ -1.15
TMEM260-212ENST00000556810 MST1RQ04912 1400 aa7.86□□□□□ -1.15
TMEM260-212ENST00000556810 EDC4Q6P2E9 1401 aaKnown RBP7.86□□□□□ -1.15
TMEM260-212ENST00000556810 A0A1W2PP64 1363 aa7.86□□□□□ -1.15
TMEM260-212ENST00000556810 DLL1O00548 723 aa7.86□□□□□ -1.15
TMEM260-212ENST00000556810 ZBTB39O15060 712 aa7.86□□□□□ -1.15
TMEM260-212ENST00000556810 NOS3P29474 1203 aa7.86□□□□□ -1.15
TMEM260-212ENST00000556810 IREB2P48200 963 aaKnown RBP7.86□□□□□ -1.15
TMEM260-212ENST00000556810 SEPT3Q9UH03 358 aa7.86□□□□□ -1.15
TMEM260-212ENST00000556810 TRIM33Q9UPN9 1127 aa7.86□□□□□ -1.15
TMEM260-212ENST00000556810 AKAP12Q02952 1782 aa7.86□□□□□ -1.15
TMEM260-212ENST00000556810 XRN1Q8IZH2 1706 aaKnown RBP7.86□□□□□ -1.15
TMEM260-212ENST00000556810 PPIP5K1Q6PFW1 1433 aa7.86□□□□□ -1.15
TMEM260-212ENST00000556810 SMG6Q86US8 1419 aaKnown RBP7.86□□□□□ -1.15
TMEM260-212ENST00000556810 PNPLA6Q8IY17 1366 aa7.85□□□□□ -1.15
TMEM260-212ENST00000556810 HYAL2Q12891 473 aa7.85□□□□□ -1.15
TMEM260-212ENST00000556810 FOXD4L6Q3SYB3 417 aaPredicted RBP7.85□□□□□ -1.15
TMEM260-212ENST00000556810 COL13A1Q5TAT6 717 aaPredicted RBP7.85□□□□□ -1.15
TMEM260-212ENST00000556810 TTC39BQ5VTQ0 682 aaPredicted RBP7.85□□□□□ -1.15
TMEM260-212ENST00000556810 FOXD4L3Q6VB84 417 aaPredicted RBP7.85□□□□□ -1.15
TMEM260-212ENST00000556810 SRA1Q9HD15 236 aaKnown RBP7.85□□□□□ -1.15
TMEM260-212ENST00000556810 BLMP54132 1417 aaPredicted RBP7.85□□□□□ -1.15
TMEM260-212ENST00000556810 CACTIN-AS1Q8N1I8 211 aa7.84□□□□□ -1.15
TMEM260-212ENST00000556810 SPACA7Q96KW9 195 aa7.84□□□□□ -1.15
TMEM260-212ENST00000556810 ORAI2Q96SN7 254 aa7.84□□□□□ -1.15
TMEM260-212ENST00000556810 TRAIPQ9BWF2 469 aa7.84□□□□□ -1.15
TMEM260-212ENST00000556810 CPSF1Q10570 1443 aaKnown RBP7.84□□□□□ -1.15
TMEM260-212ENST00000556810 ANKARQ7Z5J8 1434 aa7.84□□□□□ -1.15
TMEM260-212ENST00000556810 CDC42BPGQ6DT37 1551 aa7.84□□□□□ -1.15
TMEM260-212ENST00000556810 MON2Q7Z3U7 1717 aa7.83□□□□□ -1.16
TMEM260-212ENST00000556810 TTC21AQ8NDW8 1320 aa7.83□□□□□ -1.16
TMEM260-212ENST00000556810 MAP2P11137 1827 aaKnown RBP7.83□□□□□ -1.16
TMEM260-212ENST00000556810 SCO2A0A1W2PP80 73 aa7.83□□□□□ -1.16
TMEM260-212ENST00000556810 FYB1O15117 783 aa7.83□□□□□ -1.16
TMEM260-212ENST00000556810 SCNN1AP37088 669 aa7.83□□□□□ -1.16
TMEM260-212ENST00000556810 MTHFSP49914 203 aa7.83□□□□□ -1.16
TMEM260-212ENST00000556810 MAP4K3Q8IVH8 894 aa7.83□□□□□ -1.16
TMEM260-212ENST00000556810 COG3Q96JB2 828 aa7.83□□□□□ -1.16
TMEM260-212ENST00000556810 MEGF10Q96KG7 1140 aa7.83□□□□□ -1.16
TMEM260-212ENST00000556810 ABI2Q9NYB9 513 aaPredicted RBP7.83□□□□□ -1.16
TMEM260-212ENST00000556810 ADGRL3Q9HAR2 1447 aa7.83□□□□□ -1.16
TMEM260-212ENST00000556810 NALCNQ8IZF0 1738 aa7.83□□□□□ -1.16
TMEM260-212ENST00000556810 EP400Q96L91 3159 aa7.83□□□□□ -1.16
TMEM260-212ENST00000556810 ROBO2Q9HCK4 1378 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms