RNA–Protein interactions for RNA: ENST00000556658.1

RGMA-208, Transcript of repulsive guidance molecule BMP co-receptor a, humanhuman

TSL 1 (best) BASIC

Gene RGMA, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGMA-208ENST00000556658 KRT23Q9C075 422 aa23.55■■□□□ 1.36
RGMA-208ENST00000556658 SLC3A2P08195 630 aaKnown RBP23.54■■□□□ 1.36
RGMA-208ENST00000556658 RBM5P52756 815 aaKnown RBP eCLIP23.54■■□□□ 1.36
RGMA-208ENST00000556658 COL9A3Q14050 684 aaPredicted RBP23.54■■□□□ 1.36
RGMA-208ENST00000556658 Q6ZUG5 572 aa23.54■■□□□ 1.36
RGMA-208ENST00000556658 TIAM2Q8IVF5 1701 aa23.54■■□□□ 1.36
RGMA-208ENST00000556658 MKRN1Q9UHC7 482 aaKnown RBP23.53■■□□□ 1.36
RGMA-208ENST00000556658 PCP11498 1178 aaKnown RBP23.53■■□□□ 1.36
RGMA-208ENST00000556658 TNIP1Q15025 636 aa23.53■■□□□ 1.36
RGMA-208ENST00000556658 MB21D2Q8IYB1 491 aaPredicted RBP23.53■■□□□ 1.36
RGMA-208ENST00000556658 USP40Q9NVE5 1235 aa23.53■■□□□ 1.36
RGMA-208ENST00000556658 HDAC9Q9UKV0 1011 aa23.53■■□□□ 1.36
RGMA-208ENST00000556658 NAV1Q8NEY1 1877 aa23.53■■□□□ 1.36
RGMA-208ENST00000556658 LAMB1P07942 1786 aa23.52■■□□□ 1.36
RGMA-208ENST00000556658 WDR19Q8NEZ3 1342 aa23.52■■□□□ 1.36
RGMA-208ENST00000556658 RASSF7Q02833 373 aa23.52■■□□□ 1.36
RGMA-208ENST00000556658 CIAPIN1Q6FI81 312 aa23.52■■□□□ 1.36
RGMA-208ENST00000556658 MAPKAPK5Q8IW41 473 aa23.52■■□□□ 1.36
RGMA-208ENST00000556658 OGFOD1Q8N543 542 aa23.52■■□□□ 1.36
RGMA-208ENST00000556658 SH2B1Q9NRF2 756 aaPredicted RBP23.52■■□□□ 1.36
RGMA-208ENST00000556658 FOCADQ5VW36 1801 aa23.52■■□□□ 1.36
RGMA-208ENST00000556658 CXCL9Q07325 125 aa23.51■■□□□ 1.35
RGMA-208ENST00000556658 TOB2Q14106 344 aaPredicted RBP23.51■■□□□ 1.35
RGMA-208ENST00000556658 APOBEC3HQ6NTF7 200 aaKnown RBP23.51■■□□□ 1.35
RGMA-208ENST00000556658 ARHGAP27Q6ZUM4 889 aa23.51■■□□□ 1.35
RGMA-208ENST00000556658 AGBL3Q8NEM8 1001 aa23.51■■□□□ 1.35
RGMA-208ENST00000556658 LARP6Q9BRS8 491 aaKnown RBP23.51■■□□□ 1.35
RGMA-208ENST00000556658 SLKQ9H2G2 1235 aaPredicted RBP23.51■■□□□ 1.35
RGMA-208ENST00000556658 TOMM22Q9NS69 142 aa23.51■■□□□ 1.35
RGMA-208ENST00000556658 B4E1Z4 1266 aa23.51■■□□□ 1.35
RGMA-208ENST00000556658 PRC1O43663 620 aa23.51■■□□□ 1.35
RGMA-208ENST00000556658 CHST3Q7LGC8 479 aa23.51■■□□□ 1.35
RGMA-208ENST00000556658 NEDD4P46934 1319 aa23.5■■□□□ 1.35
RGMA-208ENST00000556658 CYP2D7A0A087X1C5 515 aa23.5■■□□□ 1.35
RGMA-208ENST00000556658 POLR3DP05423 398 aaPredicted RBP23.5■■□□□ 1.35
RGMA-208ENST00000556658 USP17L8P0C7I0 530 aa23.5■■□□□ 1.35
RGMA-208ENST00000556658 STK11IPQ8N1F8 1099 aa23.5■■□□□ 1.35
RGMA-208ENST00000556658 FBXL16Q8N461 479 aa23.5■■□□□ 1.35
RGMA-208ENST00000556658 LRRC2Q9BYS8 371 aa23.5■■□□□ 1.35
RGMA-208ENST00000556658 ADAMTSL1Q8N6G6 1762 aa23.5■■□□□ 1.35
RGMA-208ENST00000556658 FLT1P17948 1338 aa23.5■■□□□ 1.35
RGMA-208ENST00000556658 ECM29Q5VYK3 1845 aa23.5■■□□□ 1.35
RGMA-208ENST00000556658 MYH1P12882 1939 aa23.5■■□□□ 1.35
RGMA-208ENST00000556658 CUL4AQ13619 759 aa23.49■■□□□ 1.35
RGMA-208ENST00000556658 RRP12Q5JTH9 1297 aaKnown RBP23.49■■□□□ 1.35
RGMA-208ENST00000556658 C12orf60Q5U649 245 aa23.49■■□□□ 1.35
RGMA-208ENST00000556658 CDC42EP5Q6NZY7 148 aa23.49■■□□□ 1.35
RGMA-208ENST00000556658 GMLQ99445 158 aa23.49■■□□□ 1.35
RGMA-208ENST00000556658 INCENPQ9NQS7 918 aa23.49■■□□□ 1.35
RGMA-208ENST00000556658 FOXD4L1Q9NU39 408 aa23.49■■□□□ 1.35
RGMA-208ENST00000556658 PDE4BQ07343 736 aa23.49■■□□□ 1.35
RGMA-208ENST00000556658 BRF1Q92994 677 aa23.49■■□□□ 1.35
RGMA-208ENST00000556658 AGXT2Q9BYV1 514 aa23.49■■□□□ 1.35
RGMA-208ENST00000556658 TPCN1Q9ULQ1 816 aa23.49■■□□□ 1.35
RGMA-208ENST00000556658 KDM4AO75164 1064 aa23.48■■□□□ 1.35
RGMA-208ENST00000556658 EIF6P56537 245 aaKnown RBP23.48■■□□□ 1.35
RGMA-208ENST00000556658 CFAP100Q494V2 611 aa23.48■■□□□ 1.35
RGMA-208ENST00000556658 ESR2Q92731 530 aa23.48■■□□□ 1.35
RGMA-208ENST00000556658 INTS4Q96HW7 963 aaKnown RBP23.48■■□□□ 1.35
RGMA-208ENST00000556658 ZBTB12Q9Y330 459 aaPredicted RBP23.48■■□□□ 1.35
RGMA-208ENST00000556658 TMEM87BQ96K49 555 aa23.47■■□□□ 1.35
RGMA-208ENST00000556658 ZSWIM5Q9P217 1185 aa23.47■■□□□ 1.35
RGMA-208ENST00000556658 SAP30BPQ9UHR5 308 aaKnown RBP23.47■■□□□ 1.35
RGMA-208ENST00000556658 FGRP09769 529 aa23.47■■□□□ 1.35
RGMA-208ENST00000556658 CYP2D6P10635 497 aa23.47■■□□□ 1.35
RGMA-208ENST00000556658 ANTXR2P58335 489 aa23.47■■□□□ 1.35
RGMA-208ENST00000556658 PICALMQ13492 652 aa23.47■■□□□ 1.35
RGMA-208ENST00000556658 CWC22Q9HCG8 908 aaKnown RBP23.47■■□□□ 1.35
RGMA-208ENST00000556658 TACC3Q9Y6A5 838 aa23.47■■□□□ 1.35
RGMA-208ENST00000556658 WDHD1O75717 1129 aaPredicted RBP23.46■■□□□ 1.35
RGMA-208ENST00000556658 MMP14P50281 582 aa23.46■■□□□ 1.35
RGMA-208ENST00000556658 ME3Q16798 604 aa23.46■■□□□ 1.35
RGMA-208ENST00000556658 CYB5R4Q7L1T6 521 aa23.46■■□□□ 1.35
RGMA-208ENST00000556658 FZD9O00144 591 aa23.45■■□□□ 1.35
RGMA-208ENST00000556658 LMNB1P20700 586 aa23.45■■□□□ 1.35
RGMA-208ENST00000556658 NT5C2P49902 561 aa23.45■■□□□ 1.35
RGMA-208ENST00000556658 SART3Q15020 963 aaKnown RBP23.45■■□□□ 1.35
RGMA-208ENST00000556658 ZNF287Q9HBT7 754 aa23.45■■□□□ 1.35
RGMA-208ENST00000556658 ZSCAN21Q9Y5A6 473 aaPredicted RBP23.45■■□□□ 1.35
RGMA-208ENST00000556658 RPS12P25398 132 aaKnown RBP23.45■■□□□ 1.34
RGMA-208ENST00000556658 DLGAP5Q15398 846 aa23.45■■□□□ 1.34
RGMA-208ENST00000556658 SLC4A8Q2Y0W8 1093 aa23.45■■□□□ 1.34
RGMA-208ENST00000556658 MTA3Q9BTC8 594 aa23.45■■□□□ 1.34
RGMA-208ENST00000556658 DICER1Q9UPY3 1922 aaKnown RBP23.44■■□□□ 1.34
RGMA-208ENST00000556658 SMIM22K7EJ46 135 aa23.44■■□□□ 1.34
RGMA-208ENST00000556658 ORC4O43929 436 aa23.44■■□□□ 1.34
RGMA-208ENST00000556658 PRELPP51888 382 aa23.44■■□□□ 1.34
RGMA-208ENST00000556658 TTC6Q86TZ1 520 aa23.44■■□□□ 1.34
RGMA-208ENST00000556658 ANGEL1Q9UNK9 670 aaKnown RBP23.44■■□□□ 1.34
RGMA-208ENST00000556658 PCDHAC2Q9Y5I4 1007 aa23.44■■□□□ 1.34
RGMA-208ENST00000556658 ERICH2A1L162 156 aa23.43■■□□□ 1.34
RGMA-208ENST00000556658 RANBP6O60518 1105 aaKnown RBP23.43■■□□□ 1.34
RGMA-208ENST00000556658 LARGE1O95461 756 aa23.43■■□□□ 1.34
RGMA-208ENST00000556658 APOBRQ0VD83 1088 aa23.43■■□□□ 1.34
RGMA-208ENST00000556658 DDX52Q9Y2R4 599 aaKnown RBP eCLIP23.43■■□□□ 1.34
RGMA-208ENST00000556658 DDX60LQ5H9U9 1706 aaKnown RBP23.43■■□□□ 1.34
RGMA-208ENST00000556658 ROBO3Q96MS0 1386 aa23.43■■□□□ 1.34
RGMA-208ENST00000556658 IFIT3O14879 490 aaKnown RBP23.43■■□□□ 1.34
RGMA-208ENST00000556658 PLCD1P51178 756 aa23.43■■□□□ 1.34
RGMA-208ENST00000556658 ZNF274Q96GC6 653 aaPredicted RBP23.43■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms