RNA–Protein interactions for RNA: ENST00000556644.5

ATXN3-242, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 372 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-242ENST00000556644 CACNB2Q08289 660 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-242ENST00000556644 CNGB1Q14028 1251 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-242ENST00000556644 COL9A2Q14055 689 aaPredicted RBP5.59□□□□□ -1.51
ATXN3-242ENST00000556644 MAP3K21Q5TCX8 1036 aa5.59□□□□□ -1.51
ATXN3-242ENST00000556644 PRSS33Q8NF86 280 aa5.59□□□□□ -1.51
ATXN3-242ENST00000556644 NKX2-4Q9H2Z4 354 aa5.59□□□□□ -1.51
ATXN3-242ENST00000556644 RALYQ9UKM9 306 aaKnown RBP5.59□□□□□ -1.51
ATXN3-242ENST00000556644 MINPP1Q9UNW1 487 aa5.59□□□□□ -1.51
ATXN3-242ENST00000556644 DAGLAQ9Y4D2 1042 aa5.59□□□□□ -1.51
ATXN3-242ENST00000556644 WDFY4Q6ZS81 3184 aa5.59□□□□□ -1.51
ATXN3-242ENST00000556644 ATRXP46100 2492 aa5.59□□□□□ -1.51
ATXN3-242ENST00000556644 SPEF2Q9C093 1822 aa5.59□□□□□ -1.51
ATXN3-242ENST00000556644 XIRP2A4UGR9 3374 aa5.59□□□□□ -1.51
ATXN3-242ENST00000556644 PLXNA1Q9UIW2 1896 aa5.58□□□□□ -1.52
ATXN3-242ENST00000556644 PTPRZ1P23471 2315 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-242ENST00000556644 ZNF318Q5VUA4 2279 aa5.58□□□□□ -1.52
ATXN3-242ENST00000556644 DNAH12Q6ZR08 3092 aa5.58□□□□□ -1.52
ATXN3-242ENST00000556644 MED19A0JLT2 244 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-242ENST00000556644 SNAP23O00161 211 aa5.58□□□□□ -1.52
ATXN3-242ENST00000556644 PEX10O60683 326 aa5.58□□□□□ -1.52
ATXN3-242ENST00000556644 MYCNP04198 464 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-242ENST00000556644 SSTR3P32745 418 aaPredicted RBP5.58□□□□□ -1.52
ATXN3-242ENST00000556644 CCL14Q16627 93 aa5.58□□□□□ -1.52
ATXN3-242ENST00000556644 CCDC152Q4G0S7 254 aa5.58□□□□□ -1.52
ATXN3-242ENST00000556644 KRT40Q6A162 431 aa5.58□□□□□ -1.52
ATXN3-242ENST00000556644 ISCA1Q9BUE6 129 aa5.58□□□□□ -1.52
ATXN3-242ENST00000556644 CD209Q9NNX6 404 aa5.58□□□□□ -1.52
ATXN3-242ENST00000556644 GJD2Q9UKL4 321 aa5.58□□□□□ -1.52
ATXN3-242ENST00000556644 USP34Q70CQ2 3546 aa5.58□□□□□ -1.52
ATXN3-242ENST00000556644 AK9Q5TCS8 1911 aa5.58□□□□□ -1.52
ATXN3-242ENST00000556644 REV3LO60673 3130 aa5.57□□□□□ -1.52
ATXN3-242ENST00000556644 CHD9Q3L8U1 2897 aa5.57□□□□□ -1.52
ATXN3-242ENST00000556644 SOWAHBA6NEL2 793 aa5.57□□□□□ -1.52
ATXN3-242ENST00000556644 RFXAPO00287 272 aa5.57□□□□□ -1.52
ATXN3-242ENST00000556644 ZKSCAN1P17029 563 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-242ENST00000556644 TNNI2P48788 182 aa5.57□□□□□ -1.52
ATXN3-242ENST00000556644 GJC2Q5T442 439 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-242ENST00000556644 HFE2Q6ZVN8 426 aa5.57□□□□□ -1.52
ATXN3-242ENST00000556644 ERMP1Q7Z2K6 904 aa5.57□□□□□ -1.52
ATXN3-242ENST00000556644 DZIP1LQ8IYY4 767 aaKnown RBP5.57□□□□□ -1.52
ATXN3-242ENST00000556644 CNTNAP3BQ96NU0 1288 aa5.57□□□□□ -1.52
ATXN3-242ENST00000556644 ZNF341Q9BYN7 854 aa5.57□□□□□ -1.52
ATXN3-242ENST00000556644 CNTNAP3Q9BZ76 1288 aa5.57□□□□□ -1.52
ATXN3-242ENST00000556644 RSPH6AQ9H0K4 717 aa5.57□□□□□ -1.52
ATXN3-242ENST00000556644 PRRC2BQ5JSZ5 2229 aaKnown RBP5.57□□□□□ -1.52
ATXN3-242ENST00000556644 KMT2BQ9UMN6 2715 aaPredicted RBP5.57□□□□□ -1.52
ATXN3-242ENST00000556644 TPRP12270 2363 aaKnown RBP5.57□□□□□ -1.52
ATXN3-242ENST00000556644 NCOR2Q9Y618 2525 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 PLXNB2O15031 1838 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 FRMPD3Q5JV73 1810 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 ZFHX4Q86UP3 3567 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 CNGA1P29973 690 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 KCNJ4P48050 445 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 TLE2Q04725 743 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 FPGSQ05932 587 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 FAM110CQ1W6H9 321 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 IER5LQ5T953 404 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 ANO1Q5XXA6 986 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 SLC39A5Q6ZMH5 540 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 CCDC84Q86UT8 332 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-242ENST00000556644 GJD3Q8N144 294 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 HERVK_113Q902F9 699 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 FERMT2Q96AC1 680 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.56□□□□□ -1.52
ATXN3-242ENST00000556644 KCNH6Q9H252 994 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 FRMD4AQ9P2Q2 1039 aaPredicted RBP5.56□□□□□ -1.52
ATXN3-242ENST00000556644 TTF2Q9UNY4 1162 aaKnown RBP5.56□□□□□ -1.52
ATXN3-242ENST00000556644 YBX2Q9Y2T7 364 aaKnown RBP5.56□□□□□ -1.52
ATXN3-242ENST00000556644 KNSTRNQ9Y448 316 aa5.56□□□□□ -1.52
ATXN3-242ENST00000556644 A0A0G2JMZ2 1700 aa5.55□□□□□ -1.52
ATXN3-242ENST00000556644 A0A0G2JLL6 359 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-242ENST00000556644 RAG1P15918 1043 aa5.55□□□□□ -1.52
ATXN3-242ENST00000556644 CRKP46108 304 aa5.55□□□□□ -1.52
ATXN3-242ENST00000556644 ID4P47928 161 aa5.55□□□□□ -1.52
ATXN3-242ENST00000556644 GRIK5Q16478 980 aa5.55□□□□□ -1.52
ATXN3-242ENST00000556644 TREML2Q5T2D2 321 aa5.55□□□□□ -1.52
ATXN3-242ENST00000556644 DCAF15Q66K64 600 aa5.55□□□□□ -1.52
ATXN3-242ENST00000556644 PRRT2Q7Z6L0 340 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-242ENST00000556644 CCER1Q8TC90 406 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-242ENST00000556644 CDC5LQ99459 802 aaKnown RBP5.55□□□□□ -1.52
ATXN3-242ENST00000556644 CERS4Q9HA82 394 aa5.55□□□□□ -1.52
ATXN3-242ENST00000556644 SLC28A3Q9HAS3 691 aa5.55□□□□□ -1.52
ATXN3-242ENST00000556644 MSRAQ9UJ68 235 aa5.55□□□□□ -1.52
ATXN3-242ENST00000556644 LEMD3Q9Y2U8 911 aa5.55□□□□□ -1.52
ATXN3-242ENST00000556644 ZHX2Q9Y6X8 837 aa5.55□□□□□ -1.52
ATXN3-242ENST00000556644 C5orf42Q9H799 3197 aa5.55□□□□□ -1.52
ATXN3-242ENST00000556644 RPAP1Q9BWH6 1393 aaPredicted RBP5.55□□□□□ -1.52
ATXN3-242ENST00000556644 CHD7Q9P2D1 2997 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 TRIM75PA6NK02 468 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 DNM1LO00429 736 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 CXCL11O14625 94 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 PDE8AO60658 829 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 PQBP1O60828 265 aaKnown RBP5.54□□□□□ -1.52
ATXN3-242ENST00000556644 CLTBP09497 229 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 ACRP10323 421 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 ALADP13716 330 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 MYOGP15173 224 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 ADCYAP1R1P41586 468 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 RABGGTBP53611 331 aa5.54□□□□□ -1.52
ATXN3-242ENST00000556644 PTPN5P54829 565 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms