RNA–Protein interactions for RNA: ENST00000556628.5

HNRNPC-226, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 1 (best) BASIC

Gene HNRNPC, Length 1,156 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-226ENST00000556628 CRKP46108 304 aa9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 IREB2P48200 963 aaKnown RBP9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 RFX5P48382 616 aaPredicted RBP9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 BCAMP50895 628 aa9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 HDLBPQ00341 1268 aaKnown RBP9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 DZIP1LQ8IYY4 767 aaKnown RBP9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 TEKT1Q969V4 418 aa9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 SLC10A4Q96EP9 437 aa9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 TDRD3Q9H7E2 651 aaKnown RBP9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 GNL3LQ9NVN8 582 aaKnown RBP9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 TMOD2Q9NZR1 351 aa9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 PCDHAC2Q9Y5I4 1007 aa9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 LRRFIP2Q9Y608 721 aaKnown RBP9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 PCNTO95613 3336 aa9.56□□□□□ -0.88
HNRNPC-226ENST00000556628 UNCXA6NJT0 531 aa9.55□□□□□ -0.88
HNRNPC-226ENST00000556628 FGFR2P21802 821 aa9.55□□□□□ -0.88
HNRNPC-226ENST00000556628 IL15P40933 162 aaPredicted RBP9.55□□□□□ -0.88
HNRNPC-226ENST00000556628 DGKZQ13574 1117 aa9.55□□□□□ -0.88
HNRNPC-226ENST00000556628 RASA3Q14644 834 aa9.55□□□□□ -0.88
HNRNPC-226ENST00000556628 ATP2B3Q16720 1220 aa9.55□□□□□ -0.88
HNRNPC-226ENST00000556628 NBPF12Q5TAG4 269 aaPredicted RBP9.55□□□□□ -0.88
HNRNPC-226ENST00000556628 INTS3Q68E01 1043 aaKnown RBP9.55□□□□□ -0.88
HNRNPC-226ENST00000556628 WDR66Q8TBY9 1149 aa9.55□□□□□ -0.88
HNRNPC-226ENST00000556628 MEIS3Q99687 375 aa9.55□□□□□ -0.88
HNRNPC-226ENST00000556628 ZNF70Q9UC06 446 aaPredicted RBP9.55□□□□□ -0.88
HNRNPC-226ENST00000556628 SUGT1Q9Y2Z0 365 aa9.55□□□□□ -0.88
HNRNPC-226ENST00000556628 MANSC4A6NHS7 340 aaPredicted RBP9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 CCDC85CA6NKD9 419 aa9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 TCP10L2B9ZVM9 353 aa9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 TM4SF4P48230 202 aa9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 INHBEP58166 350 aa9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 MAP3K11Q16584 847 aa9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 LDLRAD1Q5T700 205 aa9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 SPRYD7Q5W111 196 aa9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 ATF7IPQ6VMQ6 1270 aa9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 ATG9AQ7Z3C6 839 aa9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 ANKRD13AQ8IZ07 590 aa9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 MRIQ9BWK5 157 aa9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 MCOLN1Q9GZU1 580 aa9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 RABGEF1Q9UJ41 708 aa9.54□□□□□ -0.88
HNRNPC-226ENST00000556628 SRGAP3O43295 1099 aa9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 ALDH1A1P00352 501 aa9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 GNAI2P04899 355 aa9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 ZBTB48P10074 688 aaPredicted RBP9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 TRIM27P14373 513 aa9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 ZKSCAN2Q63HK3 967 aa9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 HOOK2Q96ED9 719 aa9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 ZDHHC15Q96MV8 337 aa9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 COPRSQ9NQ92 184 aa9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 DENND2AQ9ULE3 1009 aa9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 FZD1Q9UP38 647 aa9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 PA2G4Q9UQ80 394 aaKnown RBP9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 AKAP2Q9Y2D5 859 aa9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 PCDHGA10Q9Y5H3 936 aa9.53□□□□□ -0.88
HNRNPC-226ENST00000556628 SSC5DA1L4H1 1573 aa9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 TESPA1A2RU30 521 aaPredicted RBP9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 DPYSL4O14531 572 aa9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 USP2O75604 605 aaPredicted RBP9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 BCAR3O75815 825 aa9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 TBC1D8O95759 1140 aa9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 LDHBP07195 334 aaKnown RBP9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 GRIK5Q16478 980 aa9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 OTUD7BQ6GQQ9 843 aa9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 TYW1BQ6NUM6 668 aa9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 HHIPL2Q6UWX4 724 aa9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 ZGPATQ8N5A5 531 aaKnown RBP9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 ANKK1Q8NFD2 765 aa9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 CLUAP1Q96AJ1 413 aa9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 IRX2Q9BZI1 471 aaPredicted RBP9.52□□□□□ -0.89
HNRNPC-226ENST00000556628 AK9Q5TCS8 1911 aa9.51□□□□□ -0.89
HNRNPC-226ENST00000556628 G3BP1Q13283 466 aaKnown RBP eCLIP9.51□□□□□ -0.894e-10■□□□□ 8.8
HNRNPC-226ENST00000556628 MTX1Q13505 466 aa9.51□□□□□ -0.89
HNRNPC-226ENST00000556628 PROX2Q3B8N5 592 aa9.51□□□□□ -0.89
HNRNPC-226ENST00000556628 GORABQ5T7V8 394 aa9.51□□□□□ -0.89
HNRNPC-226ENST00000556628 CTU1Q7Z7A3 348 aaKnown RBP9.51□□□□□ -0.89
HNRNPC-226ENST00000556628 FAM83AQ86UY5 434 aa9.51□□□□□ -0.89
HNRNPC-226ENST00000556628 FTSJ3Q8IY81 847 aaKnown RBP9.51□□□□□ -0.89
HNRNPC-226ENST00000556628 WNK4Q96J92 1243 aa9.51□□□□□ -0.89
HNRNPC-226ENST00000556628 CLMNQ96JQ2 1002 aa9.51□□□□□ -0.89
HNRNPC-226ENST00000556628 TMEM39BQ9GZU3 492 aa9.51□□□□□ -0.89
HNRNPC-226ENST00000556628 CSADQ9Y600 493 aa9.51□□□□□ -0.89
HNRNPC-226ENST00000556628 AOX1Q06278 1338 aa9.51□□□□□ -0.89
HNRNPC-226ENST00000556628 OTOFQ9HC10 1997 aa9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 GPR25O00155 361 aa9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 PHKA1P46020 1223 aa9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 CACNB3P54284 484 aa9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 MVPQ14764 893 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 PKN2Q16513 984 aaKnown RBP9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 FKBP1CQ5VVH2 108 aa9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 DCAF15Q66K64 600 aa9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 CCDC102BQ68D86 513 aa9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 SLF2Q8IX21 1173 aa9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 ZNF296Q8WUU4 475 aaPredicted RBP9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 NEUROD6Q96NK8 337 aa9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 ELP3Q9H9T3 547 aa9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 SALL1Q9NSC2 1324 aa9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 LAMB1P07942 1786 aa9.5□□□□□ -0.89
HNRNPC-226ENST00000556628 A0A1B0GUL7 405 aa9.49□□□□□ -0.89
HNRNPC-226ENST00000556628 FKTNO75072 461 aa9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms