RNA–Protein interactions for RNA: ENST00000556516.1

PCNX1-212, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-212ENST00000556516 UBL7Q96S82 380 aaPredicted RBP7.42□□□□□ -1.22
PCNX1-212ENST00000556516 TINF2Q9BSI4 451 aa7.42□□□□□ -1.22
PCNX1-212ENST00000556516 C9orf172C9J069 976 aa7.41□□□□□ -1.22
PCNX1-212ENST00000556516 GREM1O60565 184 aa7.41□□□□□ -1.22
PCNX1-212ENST00000556516 NRG1Q02297 640 aaPredicted RBP7.41□□□□□ -1.22
PCNX1-212ENST00000556516 APOBRQ0VD83 1088 aa7.41□□□□□ -1.22
PCNX1-212ENST00000556516 SEZ6Q53EL9 994 aa7.41□□□□□ -1.22
PCNX1-212ENST00000556516 NAALADL2Q58DX5 795 aa7.41□□□□□ -1.22
PCNX1-212ENST00000556516 PPM1JQ5JR12 505 aa7.41□□□□□ -1.22
PCNX1-212ENST00000556516 TMEM130Q8N3G9 435 aa7.41□□□□□ -1.22
PCNX1-212ENST00000556516 ELMO3Q96BJ8 720 aa7.41□□□□□ -1.22
PCNX1-212ENST00000556516 CYP4F12Q9HCS2 524 aa7.41□□□□□ -1.22
PCNX1-212ENST00000556516 KCNQ5Q9NR82 932 aa7.41□□□□□ -1.22
PCNX1-212ENST00000556516 ACTL7BQ9Y614 415 aa7.41□□□□□ -1.22
PCNX1-212ENST00000556516 MEGF11A6BM72 1044 aa7.4□□□□□ -1.22
PCNX1-212ENST00000556516 CILPO75339 1184 aa7.4□□□□□ -1.22
PCNX1-212ENST00000556516 TIAF1O95411 115 aa7.4□□□□□ -1.22
PCNX1-212ENST00000556516 BPNT1O95861 308 aa7.4□□□□□ -1.22
PCNX1-212ENST00000556516 ITGB2P05107 769 aa7.4□□□□□ -1.22
PCNX1-212ENST00000556516 HCLS1P14317 486 aaPredicted RBP7.4□□□□□ -1.22
PCNX1-212ENST00000556516 ID3Q02535 119 aa7.4□□□□□ -1.22
PCNX1-212ENST00000556516 SOX4Q06945 474 aaPredicted RBP7.4□□□□□ -1.22
PCNX1-212ENST00000556516 ZC3H12AQ5D1E8 599 aaKnown RBP7.4□□□□□ -1.22
PCNX1-212ENST00000556516 C2CD4AQ8NCU7 369 aaPredicted RBP7.4□□□□□ -1.22
PCNX1-212ENST00000556516 SMG8Q8ND04 991 aaKnown RBP7.4□□□□□ -1.22
PCNX1-212ENST00000556516 HIF3AQ9Y2N7 669 aa7.4□□□□□ -1.22
PCNX1-212ENST00000556516 CORINQ9Y5Q5 1042 aa7.4□□□□□ -1.22
PCNX1-212ENST00000556516 EIF4EBP3O60516 100 aaPredicted RBP7.39□□□□□ -1.23
PCNX1-212ENST00000556516 SLFN14P0C7P3 912 aa7.39□□□□□ -1.23
PCNX1-212ENST00000556516 RAB6AP20340 208 aa7.39□□□□□ -1.23
PCNX1-212ENST00000556516 ZC3H6P61129 1189 aaKnown RBP7.39□□□□□ -1.23
PCNX1-212ENST00000556516 HP1BP3Q5SSJ5 553 aaPredicted RBP7.39□□□□□ -1.23
PCNX1-212ENST00000556516 UBE3DQ7Z6J8 389 aa7.39□□□□□ -1.23
PCNX1-212ENST00000556516 TXNRD3Q86VQ6 643 aa7.39□□□□□ -1.23
PCNX1-212ENST00000556516 GPRASP2Q96D09 838 aa7.39□□□□□ -1.23
PCNX1-212ENST00000556516 FANCD2OSQ96PS1 177 aa7.39□□□□□ -1.23
PCNX1-212ENST00000556516 LGR6Q9HBX8 967 aa7.39□□□□□ -1.23
PCNX1-212ENST00000556516 BRMS1Q9HCU9 246 aa7.39□□□□□ -1.23
PCNX1-212ENST00000556516 PICK1Q9NRD5 415 aa7.39□□□□□ -1.23
PCNX1-212ENST00000556516 DISC1Q9NRI5 854 aa7.39□□□□□ -1.23
PCNX1-212ENST00000556516 FAM105AQ9NUU6 356 aa7.39□□□□□ -1.23
PCNX1-212ENST00000556516 CRIM1Q9NZV1 1036 aa7.39□□□□□ -1.23
PCNX1-212ENST00000556516 POLR3KQ9Y2Y1 108 aaPredicted RBP7.39□□□□□ -1.23
PCNX1-212ENST00000556516 SART1O43290 800 aaKnown RBP7.38□□□□□ -1.23
PCNX1-212ENST00000556516 GDF11O95390 407 aa7.38□□□□□ -1.23
PCNX1-212ENST00000556516 NEFMP07197 916 aa7.38□□□□□ -1.23
PCNX1-212ENST00000556516 MCM4P33991 863 aa7.38□□□□□ -1.23
PCNX1-212ENST00000556516 RPL6Q02878 288 aaKnown RBP7.38□□□□□ -1.23
PCNX1-212ENST00000556516 KCNMA1Q12791 1236 aa7.38□□□□□ -1.23
PCNX1-212ENST00000556516 TTLL4Q14679 1199 aa7.38□□□□□ -1.23
PCNX1-212ENST00000556516 SGO2Q562F6 1265 aa7.38□□□□□ -1.23
PCNX1-212ENST00000556516 ANKRD34AQ69YU3 496 aa7.38□□□□□ -1.23
PCNX1-212ENST00000556516 Q6ZS46 218 aa7.38□□□□□ -1.23
PCNX1-212ENST00000556516 NKD1Q969G9 470 aa7.38□□□□□ -1.23
PCNX1-212ENST00000556516 NT5C1AQ9BXI3 368 aa7.38□□□□□ -1.23
PCNX1-212ENST00000556516 SUGCTQ9HAC7 445 aa7.38□□□□□ -1.23
PCNX1-212ENST00000556516 GINM1Q9NU53 330 aa7.38□□□□□ -1.23
PCNX1-212ENST00000556516 EFR3BQ9Y2G0 817 aa7.38□□□□□ -1.23
PCNX1-212ENST00000556516 GFRA2O00451 464 aa7.37□□□□□ -1.23
PCNX1-212ENST00000556516 GAS2O43903 313 aaKnown RBP7.37□□□□□ -1.23
PCNX1-212ENST00000556516 DNAJA1P31689 397 aaKnown RBP7.37□□□□□ -1.23
PCNX1-212ENST00000556516 ASPAP45381 313 aa7.37□□□□□ -1.23
PCNX1-212ENST00000556516 GJA8P48165 433 aa7.37□□□□□ -1.23
PCNX1-212ENST00000556516 MPP2Q14168 576 aa7.37□□□□□ -1.23
PCNX1-212ENST00000556516 PLA2G4EQ3MJ16 856 aa7.37□□□□□ -1.23
PCNX1-212ENST00000556516 CDPF1Q6NVV7 123 aa7.37□□□□□ -1.23
PCNX1-212ENST00000556516 CCDC81Q6ZN84 652 aa7.37□□□□□ -1.23
PCNX1-212ENST00000556516 GK5Q6ZS86 529 aa7.37□□□□□ -1.23
PCNX1-212ENST00000556516 HDXQ7Z353 690 aa7.37□□□□□ -1.23
PCNX1-212ENST00000556516 REC114Q7Z4M0 266 aa7.37□□□□□ -1.23
PCNX1-212ENST00000556516 CCDC84Q86UT8 332 aaPredicted RBP7.37□□□□□ -1.23
PCNX1-212ENST00000556516 RBAK-RBAKDNI3L0D1 243 aa7.36□□□□□ -1.23
PCNX1-212ENST00000556516 RNGTTO60942 597 aaKnown RBP7.36□□□□□ -1.23
PCNX1-212ENST00000556516 GRK4P32298 578 aa7.36□□□□□ -1.23
PCNX1-212ENST00000556516 NTF4P34130 210 aa7.36□□□□□ -1.23
PCNX1-212ENST00000556516 CLCQ05315 142 aa7.36□□□□□ -1.23
PCNX1-212ENST00000556516 CYFIP1Q7L576 1253 aa7.36□□□□□ -1.23
PCNX1-212ENST00000556516 ALYREFQ86V81 257 aaKnown RBP7.36□□□□□ -1.23
PCNX1-212ENST00000556516 ARMC10Q8N2F6 343 aa7.36□□□□□ -1.23
PCNX1-212ENST00000556516 FBLIM1Q8WUP2 373 aa7.36□□□□□ -1.23
PCNX1-212ENST00000556516 UTP4Q969X6 686 aaKnown RBP7.36□□□□□ -1.23
PCNX1-212ENST00000556516 FAM46AQ96IP4 442 aaKnown RBP7.36□□□□□ -1.23
PCNX1-212ENST00000556516 CEP41Q9BYV8 373 aa7.36□□□□□ -1.23
PCNX1-212ENST00000556516 PPT2Q9UMR5 302 aa7.36□□□□□ -1.23
PCNX1-212ENST00000556516 NASPP49321 788 aaPredicted RBP7.35□□□□□ -1.23
PCNX1-212ENST00000556516 ETF1P62495 437 aaKnown RBP7.35□□□□□ -1.23
PCNX1-212ENST00000556516 CWF19L2Q2TBE0 894 aaKnown RBP7.35□□□□□ -1.23
PCNX1-212ENST00000556516 SCARA3Q6AZY7 606 aa7.35□□□□□ -1.23
PCNX1-212ENST00000556516 DZIP1LQ8IYY4 767 aaKnown RBP7.35□□□□□ -1.23
PCNX1-212ENST00000556516 TMEM151AQ8N4L1 468 aa7.35□□□□□ -1.23
PCNX1-212ENST00000556516 LRRC3Q9BY71 257 aa7.35□□□□□ -1.23
PCNX1-212ENST00000556516 FBRSQ9HAH7 460 aa7.35□□□□□ -1.23
PCNX1-212ENST00000556516 PIDD1Q9HB75 910 aa7.35□□□□□ -1.23
PCNX1-212ENST00000556516 PCDHB14Q9Y5E9 798 aa7.35□□□□□ -1.23
PCNX1-212ENST00000556516 ZCCHC6Q5VYS8 1495 aaKnown RBP7.35□□□□□ -1.23
PCNX1-212ENST00000556516 DYNC1LI2O43237 492 aaPredicted RBP7.34□□□□□ -1.23
PCNX1-212ENST00000556516 BMP3P12645 472 aa7.34□□□□□ -1.23
PCNX1-212ENST00000556516 RXRBP28702 533 aa7.34□□□□□ -1.23
PCNX1-212ENST00000556516 GATA4P43694 442 aa7.34□□□□□ -1.23
PCNX1-212ENST00000556516 USP11P51784 963 aa7.34□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms