RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 PTF1AQ7RTS3 328 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 PDILTQ8N807 584 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 ZNF512BQ96KM6 892 aaPredicted RBP5.89□□□□□ -1.47
TMEM260-210ENST00000556422 RBSNQ9H1K0 784 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 RSPH14Q9UHP6 348 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 SUFUQ9UMX1 484 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 E7EWF7 191 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 SNAP23O00161 211 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 JAK2O60674 1132 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 NTSR2O95665 410 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 CCDC175P0C221 793 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 HCLS1P14317 486 aaPredicted RBP5.89□□□□□ -1.47
TMEM260-210ENST00000556422 DNM1Q05193 864 aaKnown RBP5.89□□□□□ -1.47
TMEM260-210ENST00000556422 STK3Q13188 491 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 ERCC4Q92889 916 aaPredicted RBP5.89□□□□□ -1.47
TMEM260-210ENST00000556422 DEF6Q9H4E7 631 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 MAGEC2Q9UBF1 373 aaPredicted RBP5.89□□□□□ -1.47
TMEM260-210ENST00000556422 BIN2Q9UBW5 565 aaPredicted RBP5.89□□□□□ -1.47
TMEM260-210ENST00000556422 SCRN1Q12765 414 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 LRSAM1Q6UWE0 723 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 BRF1Q92994 677 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 SEC31BQ9NQW1 1179 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 MYH13Q9UKX3 1938 aa5.89□□□□□ -1.47
TMEM260-210ENST00000556422 CTDNEP1O95476 244 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 PHKA1P46020 1223 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 NASPP49321 788 aaPredicted RBP5.88□□□□□ -1.47
TMEM260-210ENST00000556422 INF2Q27J81 1249 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 ZC3H12AQ5D1E8 599 aaKnown RBP5.88□□□□□ -1.47
TMEM260-210ENST00000556422 NKX2-3Q8TAU0 364 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 CCDC34Q96HJ3 373 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 TRAIPQ9BWF2 469 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 CNNM1Q9NRU3 951 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 CHCHD3Q9NX63 227 aaKnown RBP5.88□□□□□ -1.47
TMEM260-210ENST00000556422 SALL1Q9NSC2 1324 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 FAM98CQ17RN3 349 aaKnown RBP5.88□□□□□ -1.47
TMEM260-210ENST00000556422 LARP1BQ659C4 914 aaKnown RBP5.88□□□□□ -1.47
TMEM260-210ENST00000556422 CCDC102BQ68D86 513 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 FAM173BQ6P4H8 233 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 DHX32Q7L7V1 743 aaKnown RBP5.88□□□□□ -1.47
TMEM260-210ENST00000556422 MICALL1Q8N3F8 863 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 LINC00116Q8NCU8 138 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 HELBQ8NG08 1087 aaPredicted RBP5.88□□□□□ -1.47
TMEM260-210ENST00000556422 APPBP2Q92624 585 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 AK7Q96M32 723 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 PIH1D3Q9NQM4 214 aaKnown RBP5.88□□□□□ -1.47
TMEM260-210ENST00000556422 CPSF2Q9P2I0 782 aaKnown RBP5.88□□□□□ -1.47
TMEM260-210ENST00000556422 RTL9Q8NET4 1388 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 CACNA1SQ13698 1873 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 TCRBV5S4A2TA0A5A2 114 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 VPS37CA5D8V6 355 aaPredicted RBP5.88□□□□□ -1.47
TMEM260-210ENST00000556422 FIBPO43427 364 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 FGAP02671 866 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 ZFYP08048 801 aaPredicted RBP5.88□□□□□ -1.47
TMEM260-210ENST00000556422 ADD2P35612 726 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 KCNQ4P56696 695 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 FBXL16Q8N461 479 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 SMARCC2Q8TAQ2 1214 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 BORCS6Q96GS4 357 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 TIAM2Q8IVF5 1701 aa5.88□□□□□ -1.47
TMEM260-210ENST00000556422 A0A0G2JS52 829 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 FAM177BA6PVY3 158 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 GPAA1O43292 621 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 MROH5Q6ZUA9 1318 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 CHST3Q7LGC8 479 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 FERMT3Q86UX7 667 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 TAX1BP1Q86VP1 789 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 PPP1R9BQ96SB3 815 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 DENND2AQ9ULE3 1009 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 IPO5O00410 1097 aaKnown RBP5.87□□□□□ -1.47
TMEM260-210ENST00000556422 DYNC1I1O14576 645 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 PFKFB2O60825 505 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 UBE2HP62256 183 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 APOBRQ0VD83 1088 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 PUM3Q15397 648 aaKnown RBP5.87□□□□□ -1.47
TMEM260-210ENST00000556422 ICE2Q659A1 982 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 C3orf67Q6ZVT6 689 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 TTC6Q86TZ1 520 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 ARL10Q8N8L6 244 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 NSUN7Q8NE18 718 aaKnown RBP5.87□□□□□ -1.47
TMEM260-210ENST00000556422 LPIN2Q92539 896 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 UTP14AQ9BVJ6 771 aaKnown RBP5.87□□□□□ -1.47
TMEM260-210ENST00000556422 MAF1Q9H063 256 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 ARHGEF10LQ9HCE6 1279 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 BRMS1Q9HCU9 246 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 GPHNQ9NQX3 736 aaPredicted RBP5.87□□□□□ -1.47
TMEM260-210ENST00000556422 TNRC6CQ9HCJ0 1690 aaKnown RBP5.87□□□□□ -1.47
TMEM260-210ENST00000556422 EVCP57679 992 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 HAND2P61296 217 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 RASGRF1Q13972 1273 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 WASHC4Q2M389 1173 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 C1QTNF12Q5T7M4 302 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 SMIM5Q71RC9 77 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 FAM184AQ8NB25 1140 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 PDLIM2Q96JY6 352 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 CXorf56Q9H5V9 222 aa5.87□□□□□ -1.47
TMEM260-210ENST00000556422 NIP7Q9Y221 180 aaKnown RBP eCLIP5.87□□□□□ -1.47
TMEM260-210ENST00000556422 COL1A1P02452 1464 aaPredicted RBP5.86□□□□□ -1.47
TMEM260-210ENST00000556422 BAZ2AQ9UIF9 1905 aaKnown RBP5.86□□□□□ -1.47
TMEM260-210ENST00000556422 KIF3CO14782 793 aa5.86□□□□□ -1.47
TMEM260-210ENST00000556422 ANTXR2P58335 489 aa5.86□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms