RNA–Protein interactions for RNA: ENST00000556380.3

SRP54-210, Transcript of signal recognition particle 54, humanhuman

TSL 3

Gene SRP54, Length 600 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-210ENST00000556380 CDC42EP5Q6NZY7 148 aa11.79□□□□□ -0.52
SRP54-210ENST00000556380 SMC5Q8IY18 1101 aa11.79□□□□□ -0.52
SRP54-210ENST00000556380 NDUFB9Q9Y6M9 179 aa11.79□□□□□ -0.52
SRP54-210ENST00000556380 GPR75-ASB3A0A0A6YYF3 556 aa11.78□□□□□ -0.52
SRP54-210ENST00000556380 RASSF10A6NK89 507 aa11.78□□□□□ -0.52
SRP54-210ENST00000556380 RASA3Q14644 834 aa11.78□□□□□ -0.52
SRP54-210ENST00000556380 SAPCD2Q86UD0 394 aa11.78□□□□□ -0.52
SRP54-210ENST00000556380 GCC1Q96CN9 775 aa11.78□□□□□ -0.52
SRP54-210ENST00000556380 TEPSINQ96N21 525 aa11.78□□□□□ -0.52
SRP54-210ENST00000556380 RWDD1Q9H446 243 aaPredicted RBP11.78□□□□□ -0.52
SRP54-210ENST00000556380 ANTXR1Q9H6X2 564 aa11.78□□□□□ -0.52
SRP54-210ENST00000556380 VEZTQ9HBM0 779 aa11.78□□□□□ -0.52
SRP54-210ENST00000556380 PPP2R3BQ9Y5P8 575 aa11.78□□□□□ -0.52
SRP54-210ENST00000556380 TLL2Q9Y6L7 1015 aa11.78□□□□□ -0.52
SRP54-210ENST00000556380 CNTNAP1P78357 1384 aa11.78□□□□□ -0.52
SRP54-210ENST00000556380 PCNTO95613 3336 aa11.77□□□□□ -0.52
SRP54-210ENST00000556380 CACNB3P54284 484 aa11.77□□□□□ -0.53
SRP54-210ENST00000556380 RHBDL3P58872 404 aa11.77□□□□□ -0.53
SRP54-210ENST00000556380 DZIP1Q86YF9 867 aaKnown RBP11.77□□□□□ -0.53
SRP54-210ENST00000556380 SLF2Q8IX21 1173 aa11.77□□□□□ -0.53
SRP54-210ENST00000556380 OTUD7AQ8TE49 926 aaPredicted RBP11.77□□□□□ -0.53
SRP54-210ENST00000556380 HAUS7Q99871 368 aa11.77□□□□□ -0.53
SRP54-210ENST00000556380 GBA2Q9HCG7 927 aaPredicted RBP11.77□□□□□ -0.53
SRP54-210ENST00000556380 ECHDC1Q9NTX5 307 aa11.77□□□□□ -0.53
SRP54-210ENST00000556380 RAI14Q9P0K7 980 aa11.77□□□□□ -0.53
SRP54-210ENST00000556380 LRP2BPQ9P2M1 347 aa11.77□□□□□ -0.53
SRP54-210ENST00000556380 MROH7-TTC4A0A0A0MT08 1334 aa11.77□□□□□ -0.53
SRP54-210ENST00000556380 SALL3Q9BXA9 1300 aa11.77□□□□□ -0.53
SRP54-210ENST00000556380 MYH13Q9UKX3 1938 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 TCP10L2B9ZVM9 353 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 SLC34A2O95436 690 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 LDHCP07864 332 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 PPP4CP60510 307 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 GSTO1P78417 241 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 NFIAQ12857 509 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 ANKRD45Q5TZF3 282 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 FAM83AQ86UY5 434 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 ZNF687Q8N1G0 1237 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 KLRG1Q96E93 195 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 HHIPL1Q96JK4 782 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 BCL11AQ9H165 835 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 BOLA2Q9H3K6 86 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 ZNF408Q9H9D4 720 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 USP40Q9NVE5 1235 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 FAM198AQ9UFP1 575 aa11.76□□□□□ -0.53
SRP54-210ENST00000556380 TRPM7Q96QT4 1865 aa11.75□□□□□ -0.53
SRP54-210ENST00000556380 WDHD1O75717 1129 aaPredicted RBP11.75□□□□□ -0.53
SRP54-210ENST00000556380 BTDP43251 543 aa11.75□□□□□ -0.53
SRP54-210ENST00000556380 FKBP1BP68106 108 aa11.75□□□□□ -0.53
SRP54-210ENST00000556380 TNFAIP1Q13829 316 aa11.75□□□□□ -0.53
SRP54-210ENST00000556380 DEFB115Q30KQ5 88 aa11.75□□□□□ -0.53
SRP54-210ENST00000556380 NBPF12Q5TAG4 269 aaPredicted RBP11.75□□□□□ -0.53
SRP54-210ENST00000556380 ADGRA1Q86SQ6 560 aa11.75□□□□□ -0.53
SRP54-210ENST00000556380 ZFPM1Q8IX07 1006 aa11.75□□□□□ -0.53
SRP54-210ENST00000556380 C2orf69Q8N8R5 385 aa11.75□□□□□ -0.53
SRP54-210ENST00000556380 EDC3Q96F86 508 aaKnown RBP11.75□□□□□ -0.53
SRP54-210ENST00000556380 IDI2Q9BXS1 227 aa11.75□□□□□ -0.53
SRP54-210ENST00000556380 TMEM39BQ9GZU3 492 aa11.75□□□□□ -0.53
SRP54-210ENST00000556380 MKRN1Q9UHC7 482 aaKnown RBP11.75□□□□□ -0.53
SRP54-210ENST00000556380 RFX7Q2KHR2 1363 aa11.75□□□□□ -0.53
SRP54-210ENST00000556380 SSC5DA1L4H1 1573 aa11.75□□□□□ -0.53
SRP54-210ENST00000556380 GOLIM4O00461 696 aa11.74□□□□□ -0.53
SRP54-210ENST00000556380 MAP4K4O95819 1239 aaPredicted RBP11.74□□□□□ -0.53
SRP54-210ENST00000556380 VEGFBP49765 207 aa11.74□□□□□ -0.53
SRP54-210ENST00000556380 TTF1Q15361 905 aaPredicted RBP11.74□□□□□ -0.53
SRP54-210ENST00000556380 SUPT20HL1Q3ZLR7 823 aa11.74□□□□□ -0.53
SRP54-210ENST00000556380 LDLRAD1Q5T700 205 aa11.74□□□□□ -0.53
SRP54-210ENST00000556380 NAA16Q6N069 864 aaPredicted RBP11.74□□□□□ -0.53
SRP54-210ENST00000556380 TMED8Q6PL24 325 aaPredicted RBP11.74□□□□□ -0.53
SRP54-210ENST00000556380 MOB2Q70IA6 237 aa11.74□□□□□ -0.53
SRP54-210ENST00000556380 JMYQ8N9B5 988 aa11.74□□□□□ -0.53
SRP54-210ENST00000556380 FAM151AQ8WW52 585 aa11.74□□□□□ -0.53
SRP54-210ENST00000556380 STAP2Q9UGK3 403 aa11.74□□□□□ -0.53
SRP54-210ENST00000556380 ABT1Q9ULW3 272 aaKnown RBP11.74□□□□□ -0.53
SRP54-210ENST00000556380 TCRBV5S4A2TA0A5A2 114 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 UBE2Q2LH0YL09 131 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 IDH1O75874 414 aaKnown RBP11.73□□□□□ -0.53
SRP54-210ENST00000556380 NUDT7P0C024 238 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 TNNI2P48788 182 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 HUNKP57058 714 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 NUCB1Q02818 461 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 MAP3K12Q12852 859 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 MAP3K11Q16584 847 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 TSHZ3Q63HK5 1081 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 TTC41PQ6P2S7 1318 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 PI4K2BQ8TCG2 481 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 DNAJC2Q99543 621 aaKnown RBP11.73□□□□□ -0.53
SRP54-210ENST00000556380 DDX4Q9NQI0 724 aaKnown RBP11.73□□□□□ -0.53
SRP54-210ENST00000556380 PAG1Q9NWQ8 432 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 TMOD2Q9NZR1 351 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 PCDHGA4Q9Y5G9 962 aa11.73□□□□□ -0.53
SRP54-210ENST00000556380 MYH2Q9UKX2 1941 aa11.72□□□□□ -0.53
SRP54-210ENST00000556380 ECM29Q5VYK3 1845 aa11.72□□□□□ -0.53
SRP54-210ENST00000556380 ENTPD3O75355 529 aa11.72□□□□□ -0.53
SRP54-210ENST00000556380 USP2O75604 605 aaPredicted RBP11.72□□□□□ -0.53
SRP54-210ENST00000556380 PDE6AP16499 860 aa11.72□□□□□ -0.53
SRP54-210ENST00000556380 CYP7A1P22680 504 aa11.72□□□□□ -0.53
SRP54-210ENST00000556380 RGS3P49796 1198 aa11.72□□□□□ -0.53
SRP54-210ENST00000556380 CYP4F22Q6NT55 531 aa11.72□□□□□ -0.53
SRP54-210ENST00000556380 SH3BP5LQ7L8J4 393 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms