RNA–Protein interactions for RNA: ENST00000556339.5

ATXN3-240, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 525 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-240ENST00000556339 SF3B2Q13435 895 aaKnown RBP6.03□□□□□ -1.44
ATXN3-240ENST00000556339 FBXL18Q96ME1 805 aa6.03□□□□□ -1.44
ATXN3-240ENST00000556339 CCDC39Q9UFE4 941 aa6.03□□□□□ -1.44
ATXN3-240ENST00000556339 ADGRE2Q9UHX3 823 aa6.03□□□□□ -1.44
ATXN3-240ENST00000556339 ZMYM3Q14202 1370 aa6.03□□□□□ -1.44
ATXN3-240ENST00000556339 LRRIQ1Q96JM4 1722 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 DLGAP3O95886 979 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 CYP11A1P05108 521 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 SSFA2P28290 1259 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 PCDH1Q08174 1060 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 MAP7Q14244 749 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 POU4F3Q15319 338 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 AKAP4Q5JQC9 854 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 DUSP27Q5VZP5 1158 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 DYMQ7RTS9 669 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 C2CD4AQ8NCU7 369 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-240ENST00000556339 DDX54Q8TDD1 881 aaKnown RBP6.02□□□□□ -1.45
ATXN3-240ENST00000556339 CLEC4MQ9H2X3 399 aaPredicted RBP6.02□□□□□ -1.45
ATXN3-240ENST00000556339 ZFYVE1Q9HBF4 777 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 LRRC4CQ9HCJ2 640 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 ANO2Q9NQ90 1003 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 AP4E1Q9UPM8 1137 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 ARHGEF12Q9NZN5 1544 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 SUPT6HQ7KZ85 1726 aaKnown RBP6.02□□□□□ -1.45
ATXN3-240ENST00000556339 SIGLEC1Q9BZZ2 1709 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 PLEKHH2Q8IVE3 1493 aa6.02□□□□□ -1.45
ATXN3-240ENST00000556339 CNTLNQ9NXG0 1405 aa6.01□□□□□ -1.45
ATXN3-240ENST00000556339 GPATCH8Q9UKJ3 1502 aaKnown RBP6.01□□□□□ -1.45
ATXN3-240ENST00000556339 A0A096LPE4 126 aa6.01□□□□□ -1.45
ATXN3-240ENST00000556339 A0A1W2PPZ6 126 aa6.01□□□□□ -1.45
ATXN3-240ENST00000556339 ADH5P11766 374 aa6.01□□□□□ -1.45
ATXN3-240ENST00000556339 MAOBP27338 520 aa6.01□□□□□ -1.45
ATXN3-240ENST00000556339 FKBP4Q02790 459 aaKnown RBP eCLIP6.01□□□□□ -1.45
ATXN3-240ENST00000556339 ZNF211Q13398 564 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-240ENST00000556339 MSMPQ1L6U9 139 aa6.01□□□□□ -1.45
ATXN3-240ENST00000556339 PEAR1Q5VY43 1037 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-240ENST00000556339 ZAR1Q86SH2 424 aa6.01□□□□□ -1.45
ATXN3-240ENST00000556339 FLCNQ8NFG4 579 aa6.01□□□□□ -1.45
ATXN3-240ENST00000556339 CORO1BQ9BR76 489 aa6.01□□□□□ -1.45
ATXN3-240ENST00000556339 LIN7BQ9HAP6 207 aa6.01□□□□□ -1.45
ATXN3-240ENST00000556339 BSDC1Q9NW68 430 aaPredicted RBP6.01□□□□□ -1.45
ATXN3-240ENST00000556339 PRKAG2Q9UGJ0 569 aa6.01□□□□□ -1.45
ATXN3-240ENST00000556339 CDC42BPAQ5VT25 1732 aa6.01□□□□□ -1.45
ATXN3-240ENST00000556339 PREX1Q8TCU6 1659 aa6.01□□□□□ -1.45
ATXN3-240ENST00000556339 WASHC2CQ9Y4E1 1318 aa6□□□□□ -1.45
ATXN3-240ENST00000556339 PREX2Q70Z35 1606 aa6□□□□□ -1.45
ATXN3-240ENST00000556339 FAM170BA6NMN3 283 aa6□□□□□ -1.45
ATXN3-240ENST00000556339 FZD6O60353 706 aa6□□□□□ -1.45
ATXN3-240ENST00000556339 CYP27A1Q02318 531 aa6□□□□□ -1.45
ATXN3-240ENST00000556339 ZFYVE28Q9HCC9 887 aa6□□□□□ -1.45
ATXN3-240ENST00000556339 CCDC87Q9NVE4 849 aa6□□□□□ -1.45
ATXN3-240ENST00000556339 ACTL7BQ9Y614 415 aa6□□□□□ -1.45
ATXN3-240ENST00000556339 KDM5CP41229 1560 aa6□□□□□ -1.45
ATXN3-240ENST00000556339 DIP2CQ9Y2E4 1556 aa6□□□□□ -1.45
ATXN3-240ENST00000556339 ITSN2Q9NZM3 1697 aa6□□□□□ -1.45
ATXN3-240ENST00000556339 CEP162Q5TB80 1403 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 KIAA1107Q9UPP5 1409 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 ABCC1P33527 1531 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 SYCP2Q9BX26 1530 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 ABCA6Q8N139 1617 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 CFAP65Q6ZU64 1925 aaKnown RBP5.99□□□□□ -1.45
ATXN3-240ENST00000556339 KIDINS220Q9ULH0 1771 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 SAMD9LQ8IVG5 1584 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 A2MP01023 1474 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 TMEM88BA6NKF7 163 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 PPP1R15AO75807 674 aaPredicted RBP5.99□□□□□ -1.45
ATXN3-240ENST00000556339 NEFLP07196 543 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 NFICP08651 508 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 NPR3P17342 541 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 ADMP35318 185 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 PDE3AQ14432 1141 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 SHISA5Q8N114 240 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 GJD3Q8N144 294 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 CCDC82Q8N4S0 544 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 AGBL5Q8NDL9 886 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 ASIC4Q96FT7 647 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 KRTAP9-9Q9BYP9 154 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 KRTAP9-4Q9BYQ2 154 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 DAGLAQ9Y4D2 1042 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 AGLP35573 1532 aa5.99□□□□□ -1.45
ATXN3-240ENST00000556339 C3P01024 1663 aa5.98□□□□□ -1.45
ATXN3-240ENST00000556339 DISP3Q9P2K9 1392 aa5.98□□□□□ -1.45
ATXN3-240ENST00000556339 A0A1W2PP55 124 aa5.98□□□□□ -1.45
ATXN3-240ENST00000556339 PRNPP04156 253 aa5.98□□□□□ -1.45
ATXN3-240ENST00000556339 ASPAP45381 313 aa5.98□□□□□ -1.45
ATXN3-240ENST00000556339 SPRED3Q2MJR0 410 aa5.98□□□□□ -1.45
ATXN3-240ENST00000556339 ANKLE2Q86XL3 938 aa5.98□□□□□ -1.45
ATXN3-240ENST00000556339 CCNJLQ8IV13 435 aa5.98□□□□□ -1.45
ATXN3-240ENST00000556339 THEMISQ8N1K5 641 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-240ENST00000556339 EZH1Q92800 747 aaPredicted RBP5.98□□□□□ -1.45
ATXN3-240ENST00000556339 BRPF3Q9ULD4 1205 aa5.98□□□□□ -1.45
ATXN3-240ENST00000556339 PTPRTO14522 1441 aa5.98□□□□□ -1.45
ATXN3-240ENST00000556339 DHX29Q7Z478 1369 aaKnown RBP5.97□□□□□ -1.45
ATXN3-240ENST00000556339 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP5.97□□□□□ -1.45
ATXN3-240ENST00000556339 GRIA4P48058 902 aa5.97□□□□□ -1.45
ATXN3-240ENST00000556339 ZNF765Q7L2R6 523 aa5.97□□□□□ -1.45
ATXN3-240ENST00000556339 GLYCTKQ8IVS8 523 aa5.97□□□□□ -1.45
ATXN3-240ENST00000556339 EHD4Q9H223 541 aa5.97□□□□□ -1.45
ATXN3-240ENST00000556339 SEMA6CQ9H3T2 930 aa5.97□□□□□ -1.45
ATXN3-240ENST00000556339 ATP7AQ04656 1500 aa5.97□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms