RNA–Protein interactions for RNA: ENST00000556333.1

RCCD1-205, Transcript of RCC1 domain containing 1, humanhuman

TSL 1 (best)

Gene RCCD1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-205ENST00000556333 ARMC9Q7Z3E5 817 aa24.38■■□□□ 1.49
RCCD1-205ENST00000556333 TGFBRAP1Q8WUH2 860 aa24.38■■□□□ 1.49
RCCD1-205ENST00000556333 RILPL2Q969X0 211 aa24.38■■□□□ 1.49
RCCD1-205ENST00000556333 TEPSINQ96N21 525 aa24.38■■□□□ 1.49
RCCD1-205ENST00000556333 DDX4Q9NQI0 724 aaKnown RBP24.38■■□□□ 1.49
RCCD1-205ENST00000556333 ANGEL1Q9UNK9 670 aaKnown RBP24.38■■□□□ 1.49
RCCD1-205ENST00000556333 FZD1Q9UP38 647 aa24.38■■□□□ 1.49
RCCD1-205ENST00000556333 OTOFQ9HC10 1997 aa24.37■■□□□ 1.49
RCCD1-205ENST00000556333 PPP1R12BO60237 982 aaPredicted RBP24.37■■□□□ 1.49
RCCD1-205ENST00000556333 CHGBP05060 677 aa24.37■■□□□ 1.49
RCCD1-205ENST00000556333 USP5P45974 858 aa24.37■■□□□ 1.49
RCCD1-205ENST00000556333 FKBP1BP68106 108 aa24.37■■□□□ 1.49
RCCD1-205ENST00000556333 UBE3CQ15386 1083 aa24.37■■□□□ 1.49
RCCD1-205ENST00000556333 DEFB115Q30KQ5 88 aa24.37■■□□□ 1.49
RCCD1-205ENST00000556333 SAPCD2Q86UD0 394 aa24.37■■□□□ 1.49
RCCD1-205ENST00000556333 EVI5LQ96CN4 794 aa24.37■■□□□ 1.49
RCCD1-205ENST00000556333 HOOK2Q96ED9 719 aa24.37■■□□□ 1.49
RCCD1-205ENST00000556333 OSBPL3Q9H4L5 887 aa24.37■■□□□ 1.49
RCCD1-205ENST00000556333 RFX7Q2KHR2 1363 aa24.37■■□□□ 1.49
RCCD1-205ENST00000556333 RPAP1Q9BWH6 1393 aaPredicted RBP24.37■■□□□ 1.49
RCCD1-205ENST00000556333 SSC5DA1L4H1 1573 aa24.37■■□□□ 1.49
RCCD1-205ENST00000556333 ZFYP08048 801 aaPredicted RBP24.36■■□□□ 1.49
RCCD1-205ENST00000556333 GRM1Q13255 1194 aa24.36■■□□□ 1.49
RCCD1-205ENST00000556333 ERICH6BQ5W0A0 696 aa24.36■■□□□ 1.49
RCCD1-205ENST00000556333 ZFPM1Q8IX07 1006 aa24.36■■□□□ 1.49
RCCD1-205ENST00000556333 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.36■■□□□ 1.49
RCCD1-205ENST00000556333 UBE2Q2LH0YL09 131 aa24.35■■□□□ 1.49
RCCD1-205ENST00000556333 RNF113AO15541 343 aaKnown RBP24.35■■□□□ 1.49
RCCD1-205ENST00000556333 MAPKAPK5Q8IW41 473 aa24.35■■□□□ 1.49
RCCD1-205ENST00000556333 AIDAQ96BJ3 306 aa24.35■■□□□ 1.49
RCCD1-205ENST00000556333 BAZ2AQ9UIF9 1905 aaKnown RBP24.35■■□□□ 1.49
RCCD1-205ENST00000556333 CSRNP1Q96S65 589 aa24.34■■□□□ 1.49
RCCD1-205ENST00000556333 RIOK1Q9BRS2 568 aaKnown RBP24.34■■□□□ 1.49
RCCD1-205ENST00000556333 CRNKL1Q9BZJ0 848 aaKnown RBP24.34■■□□□ 1.49
RCCD1-205ENST00000556333 OSBPL5Q9H0X9 879 aaPredicted RBP24.34■■□□□ 1.49
RCCD1-205ENST00000556333 ARMT1Q9H993 441 aa24.34■■□□□ 1.49
RCCD1-205ENST00000556333 PRDM10Q9NQV6 1147 aa24.34■■□□□ 1.49
RCCD1-205ENST00000556333 PPP4R2Q9NY27 417 aa24.34■■□□□ 1.49
RCCD1-205ENST00000556333 FOXN1O15353 648 aa24.33■■□□□ 1.49
RCCD1-205ENST00000556333 MBD4O95243 580 aa24.33■■□□□ 1.49
RCCD1-205ENST00000556333 DCAF15Q66K64 600 aa24.33■■□□□ 1.49
RCCD1-205ENST00000556333 MIGA2Q7L4E1 593 aa24.33■■□□□ 1.49
RCCD1-205ENST00000556333 LCORLQ8N3X6 602 aa24.33■■□□□ 1.49
RCCD1-205ENST00000556333 FLT1P17948 1338 aa24.33■■□□□ 1.48
RCCD1-205ENST00000556333 DDTLA6NHG4 134 aaPredicted RBP24.32■■□□□ 1.48
RCCD1-205ENST00000556333 RASSF10A6NK89 507 aa24.32■■□□□ 1.48
RCCD1-205ENST00000556333 NPM3O75607 178 aaKnown RBP24.32■■□□□ 1.48
RCCD1-205ENST00000556333 IREB2P48200 963 aaKnown RBP24.32■■□□□ 1.48
RCCD1-205ENST00000556333 APPBP2Q92624 585 aa24.32■■□□□ 1.48
RCCD1-205ENST00000556333 PUS7LQ9H0K6 701 aaKnown RBP24.32■■□□□ 1.48
RCCD1-205ENST00000556333 USP2O75604 605 aaPredicted RBP24.31■■□□□ 1.48
RCCD1-205ENST00000556333 CYP4F22Q6NT55 531 aa24.31■■□□□ 1.48
RCCD1-205ENST00000556333 SAP30BPQ9UHR5 308 aaKnown RBP24.31■■□□□ 1.48
RCCD1-205ENST00000556333 ZNF157P51786 506 aaPredicted RBP24.3■■□□□ 1.48
RCCD1-205ENST00000556333 RGMBQ6NW40 437 aa24.3■■□□□ 1.48
RCCD1-205ENST00000556333 SH3BP5LQ7L8J4 393 aa24.3■■□□□ 1.48
RCCD1-205ENST00000556333 HHIPL1Q96JK4 782 aa24.3■■□□□ 1.48
RCCD1-205ENST00000556333 SIPA1L1O43166 1804 aa24.3■■□□□ 1.48
RCCD1-205ENST00000556333 ECE1P42892 770 aa24.29■■□□□ 1.48
RCCD1-205ENST00000556333 CTCFP49711 727 aaPredicted RBP24.29■■□□□ 1.48
RCCD1-205ENST00000556333 SLC4A8Q2Y0W8 1093 aa24.29■■□□□ 1.48
RCCD1-205ENST00000556333 TTC22Q5TAA0 569 aa24.29■■□□□ 1.48
RCCD1-205ENST00000556333 SDR42E1Q8WUS8 393 aa24.29■■□□□ 1.48
RCCD1-205ENST00000556333 OSBP2Q969R2 916 aa24.29■■□□□ 1.48
RCCD1-205ENST00000556333 ZNF341Q9BYN7 854 aa24.29■■□□□ 1.48
RCCD1-205ENST00000556333 COL2A1P02458 1487 aaPredicted RBP24.29■■□□□ 1.48
RCCD1-205ENST00000556333 MYH8P13535 1937 aa24.29■■□□□ 1.48
RCCD1-205ENST00000556333 DDX60LQ5H9U9 1706 aaKnown RBP24.29■■□□□ 1.48
RCCD1-205ENST00000556333 ATAD5Q96QE3 1844 aa24.28■■□□□ 1.48
RCCD1-205ENST00000556333 MAP3K11Q16584 847 aa24.28■■□□□ 1.48
RCCD1-205ENST00000556333 CAPNS2Q96L46 248 aa24.28■■□□□ 1.48
RCCD1-205ENST00000556333 DHX36Q9H2U1 1008 aaKnown RBP24.28■■□□□ 1.48
RCCD1-205ENST00000556333 PALD1Q9ULE6 856 aa24.28■■□□□ 1.48
RCCD1-205ENST00000556333 SLC4A4Q9Y6R1 1079 aa24.28■■□□□ 1.48
RCCD1-205ENST00000556333 ATRNL1Q5VV63 1379 aa24.28■■□□□ 1.48
RCCD1-205ENST00000556333 HLA-DOAP06340 250 aa24.27■■□□□ 1.48
RCCD1-205ENST00000556333 VEGFBP49765 207 aa24.27■■□□□ 1.48
RCCD1-205ENST00000556333 ANKRD13AQ8IZ07 590 aa24.27■■□□□ 1.48
RCCD1-205ENST00000556333 DDRGK1Q96HY6 314 aa24.27■■□□□ 1.48
RCCD1-205ENST00000556333 WRNIP1Q96S55 665 aa24.27■■□□□ 1.48
RCCD1-205ENST00000556333 SEC62Q99442 399 aaKnown RBP24.27■■□□□ 1.48
RCCD1-205ENST00000556333 TRIM34Q9BYJ4 488 aa24.27■■□□□ 1.48
RCCD1-205ENST00000556333 M0R2C6 588 aa24.26■■□□□ 1.47
RCCD1-205ENST00000556333 PRKAB2O43741 272 aa24.26■■□□□ 1.47
RCCD1-205ENST00000556333 ZMYM1Q5SVZ6 1142 aa24.26■■□□□ 1.47
RCCD1-205ENST00000556333 SKAP1Q86WV1 359 aa24.26■■□□□ 1.47
RCCD1-205ENST00000556333 XPO5Q9HAV4 1204 aaKnown RBP eCLIP24.26■■□□□ 1.47
RCCD1-205ENST00000556333 WDR33Q9C0J8 1336 aaKnown RBP24.26■■□□□ 1.47
RCCD1-205ENST00000556333 GPAA1O43292 621 aa24.25■■□□□ 1.47
RCCD1-205ENST00000556333 POLR3DP05423 398 aaPredicted RBP24.25■■□□□ 1.47
RCCD1-205ENST00000556333 GSPT1P15170 499 aaKnown RBP24.25■■□□□ 1.47
RCCD1-205ENST00000556333 LDLRAD1Q5T700 205 aa24.25■■□□□ 1.47
RCCD1-205ENST00000556333 CRACR2BQ8N4Y2 399 aaPredicted RBP24.25■■□□□ 1.47
RCCD1-205ENST00000556333 CCDC102AQ96A19 550 aa24.25■■□□□ 1.47
RCCD1-205ENST00000556333 SLC10A4Q96EP9 437 aa24.25■■□□□ 1.47
RCCD1-205ENST00000556333 MCM9Q9NXL9 1143 aa24.25■■□□□ 1.47
RCCD1-205ENST00000556333 PI4KBQ9UBF8 816 aa24.25■■□□□ 1.47
RCCD1-205ENST00000556333 CSADQ9Y600 493 aa24.25■■□□□ 1.47
RCCD1-205ENST00000556333 DOCK1Q14185 1865 aa24.25■■□□□ 1.47
RCCD1-205ENST00000556333 LAMB1P07942 1786 aa24.24■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms