RNA–Protein interactions for RNA: ENST00000556310.1

SLIRP-205, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 626 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-205ENST00000556310 NFIAQ12857 509 aa14.09□□□□□ -0.15
SLIRP-205ENST00000556310 ZNF467Q7Z7K2 595 aaPredicted RBP14.09□□□□□ -0.15
SLIRP-205ENST00000556310 IDI2Q9BXS1 227 aa14.09□□□□□ -0.15
SLIRP-205ENST00000556310 FAM198AQ9UFP1 575 aa14.09□□□□□ -0.15
SLIRP-205ENST00000556310 USP2O75604 605 aaPredicted RBP14.08□□□□□ -0.16
SLIRP-205ENST00000556310 MAP4K4O95819 1239 aaPredicted RBP14.08□□□□□ -0.16
SLIRP-205ENST00000556310 HSPA8P11142 646 aaKnown RBP14.08□□□□□ -0.16
SLIRP-205ENST00000556310 ANKRD13AQ8IZ07 590 aa14.08□□□□□ -0.16
SLIRP-205ENST00000556310 BBXQ8WY36 941 aaPredicted RBP14.08□□□□□ -0.16
SLIRP-205ENST00000556310 PHF12Q96QT6 1004 aa14.08□□□□□ -0.16
SLIRP-205ENST00000556310 CRBNQ96SW2 442 aa14.08□□□□□ -0.16
SLIRP-205ENST00000556310 LRRCC1Q9C099 1032 aa14.08□□□□□ -0.16
SLIRP-205ENST00000556310 MYH7P12883 1935 aa14.07□□□□□ -0.16
SLIRP-205ENST00000556310 COL2A1P02458 1487 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-205ENST00000556310 ENTPD3O75355 529 aa14.07□□□□□ -0.16
SLIRP-205ENST00000556310 WDHD1O75717 1129 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-205ENST00000556310 RGS3P49796 1198 aa14.07□□□□□ -0.16
SLIRP-205ENST00000556310 RHBDL3P58872 404 aa14.07□□□□□ -0.16
SLIRP-205ENST00000556310 TCP10Q12799 353 aa14.07□□□□□ -0.16
SLIRP-205ENST00000556310 SPRYD7Q5W111 196 aa14.07□□□□□ -0.16
SLIRP-205ENST00000556310 DCAF15Q66K64 600 aa14.07□□□□□ -0.16
SLIRP-205ENST00000556310 NAA16Q6N069 864 aaPredicted RBP14.07□□□□□ -0.16
SLIRP-205ENST00000556310 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.07□□□□□ -0.161e-8■■■■■ 34
SLIRP-205ENST00000556310 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.07□□□□□ -0.16
SLIRP-205ENST00000556310 CLMNQ96JQ2 1002 aa14.07□□□□□ -0.16
SLIRP-205ENST00000556310 DCTPP1Q9H773 170 aa14.07□□□□□ -0.16
SLIRP-205ENST00000556310 PIH1D3Q9NQM4 214 aaKnown RBP14.07□□□□□ -0.16
SLIRP-205ENST00000556310 PRDM10Q9NQV6 1147 aa14.07□□□□□ -0.16
SLIRP-205ENST00000556310 PCDHB8Q9UN66 801 aa14.07□□□□□ -0.16
SLIRP-205ENST00000556310 PCDHB15Q9Y5E8 787 aa14.07□□□□□ -0.16
SLIRP-205ENST00000556310 PCDHB13Q9Y5F0 798 aa14.07□□□□□ -0.16
SLIRP-205ENST00000556310 HAX1O00165 279 aa14.06□□□□□ -0.16
SLIRP-205ENST00000556310 MAP3K13O43283 966 aa14.06□□□□□ -0.16
SLIRP-205ENST00000556310 ZBTB48P10074 688 aaPredicted RBP14.06□□□□□ -0.16
SLIRP-205ENST00000556310 TMED8Q6PL24 325 aaPredicted RBP14.06□□□□□ -0.16
SLIRP-205ENST00000556310 HS6ST3Q8IZP7 471 aa14.06□□□□□ -0.16
SLIRP-205ENST00000556310 SLC10A4Q96EP9 437 aa14.06□□□□□ -0.16
SLIRP-205ENST00000556310 KIF12Q96FN5 646 aa14.06□□□□□ -0.16
SLIRP-205ENST00000556310 WNK4Q96J92 1243 aa14.06□□□□□ -0.16
SLIRP-205ENST00000556310 CSRNP1Q96S65 589 aa14.06□□□□□ -0.16
SLIRP-205ENST00000556310 NOL10Q9BSC4 688 aaKnown RBP14.06□□□□□ -0.16
SLIRP-205ENST00000556310 SAGE1Q9NXZ1 904 aa14.06□□□□□ -0.16
SLIRP-205ENST00000556310 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.06□□□□□ -0.16
SLIRP-205ENST00000556310 ATRNL1Q5VV63 1379 aa14.06□□□□□ -0.16
SLIRP-205ENST00000556310 STK25O00506 426 aa14.05□□□□□ -0.16
SLIRP-205ENST00000556310 IDH1O75874 414 aaKnown RBP14.05□□□□□ -0.16
SLIRP-205ENST00000556310 LBX1P52954 281 aa14.05□□□□□ -0.16
SLIRP-205ENST00000556310 SREBF2Q12772 1141 aa14.05□□□□□ -0.16
SLIRP-205ENST00000556310 VGLL4Q14135 290 aa14.05□□□□□ -0.16
SLIRP-205ENST00000556310 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.05□□□□□ -0.16
SLIRP-205ENST00000556310 DDX4Q9NQI0 724 aaKnown RBP14.05□□□□□ -0.16
SLIRP-205ENST00000556310 CSADQ9Y600 493 aa14.05□□□□□ -0.16
SLIRP-205ENST00000556310 NDUFB9Q9Y6M9 179 aa14.05□□□□□ -0.16
SLIRP-205ENST00000556310 DOCK1Q14185 1865 aa14.04□□□□□ -0.16
SLIRP-205ENST00000556310 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-205ENST00000556310 BAG3O95817 575 aa14.04□□□□□ -0.16
SLIRP-205ENST00000556310 PLCG2P16885 1265 aa14.04□□□□□ -0.16
SLIRP-205ENST00000556310 MAP3K9P80192 1104 aa14.04□□□□□ -0.16
SLIRP-205ENST00000556310 MKRN3Q13064 507 aaKnown RBP14.04□□□□□ -0.16
SLIRP-205ENST00000556310 PICALMQ13492 652 aa14.04□□□□□ -0.16
SLIRP-205ENST00000556310 AAMPQ13685 434 aa14.04□□□□□ -0.16
SLIRP-205ENST00000556310 TTF1Q15361 905 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-205ENST00000556310 COL13A1Q5TAT6 717 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-205ENST00000556310 ADGRA1Q86SQ6 560 aa14.04□□□□□ -0.16
SLIRP-205ENST00000556310 ZFPM1Q8IX07 1006 aa14.04□□□□□ -0.16
SLIRP-205ENST00000556310 ZFP91Q96JP5 570 aaPredicted RBP14.04□□□□□ -0.16
SLIRP-205ENST00000556310 WRNIP1Q96S55 665 aa14.04□□□□□ -0.16
SLIRP-205ENST00000556310 ZNF341Q9BYN7 854 aa14.04□□□□□ -0.16
SLIRP-205ENST00000556310 BCL11AQ9H165 835 aa14.04□□□□□ -0.16
SLIRP-205ENST00000556310 ANTXR1Q9H6X2 564 aa14.04□□□□□ -0.16
SLIRP-205ENST00000556310 SIPA1L1O43166 1804 aa14.04□□□□□ -0.16
SLIRP-205ENST00000556310 MANSC4A6NHS7 340 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-205ENST00000556310 SMARCA5O60264 1052 aaPredicted RBP14.03□□□□□ -0.16
SLIRP-205ENST00000556310 ATP5JP18859 108 aa14.03□□□□□ -0.16
SLIRP-205ENST00000556310 TM4SF4P48230 202 aa14.03□□□□□ -0.16
SLIRP-205ENST00000556310 PPP4CP60510 307 aa14.03□□□□□ -0.16
SLIRP-205ENST00000556310 MAP3K12Q12852 859 aa14.03□□□□□ -0.16
SLIRP-205ENST00000556310 SH3BP5LQ7L8J4 393 aa14.03□□□□□ -0.16
SLIRP-205ENST00000556310 TEX11Q8IYF3 940 aa14.03□□□□□ -0.16
SLIRP-205ENST00000556310 ZNF579Q8NAF0 562 aaKnown RBP14.03□□□□□ -0.16
SLIRP-205ENST00000556310 DNAJC2Q99543 621 aaKnown RBP14.03□□□□□ -0.16
SLIRP-205ENST00000556310 ELP3Q9H9T3 547 aa14.03□□□□□ -0.16
SLIRP-205ENST00000556310 RNF186Q9NXI6 227 aa14.03□□□□□ -0.16
SLIRP-205ENST00000556310 AATFQ9NY61 560 aaKnown RBP eCLIP14.03□□□□□ -0.16
SLIRP-205ENST00000556310 TSKSQ9UJT2 592 aa14.03□□□□□ -0.16
SLIRP-205ENST00000556310 DDX60LQ5H9U9 1706 aaKnown RBP14.03□□□□□ -0.16
SLIRP-205ENST00000556310 CASP8AP2Q9UKL3 1982 aa14.02□□□□□ -0.16
SLIRP-205ENST00000556310 MYH1P12882 1939 aa14.02□□□□□ -0.16
SLIRP-205ENST00000556310 NAV1Q8NEY1 1877 aa14.02□□□□□ -0.16
SLIRP-205ENST00000556310 CYP7A1P22680 504 aa14.02□□□□□ -0.17
SLIRP-205ENST00000556310 GJA5P36382 358 aa14.02□□□□□ -0.17
SLIRP-205ENST00000556310 PLCB2Q00722 1185 aa14.02□□□□□ -0.17
SLIRP-205ENST00000556310 MIGA2Q7L4E1 593 aa14.02□□□□□ -0.17
SLIRP-205ENST00000556310 CERS3Q8IU89 383 aa14.02□□□□□ -0.17
SLIRP-205ENST00000556310 ZSCAN29Q8IWY8 852 aaPredicted RBP14.02□□□□□ -0.17
SLIRP-205ENST00000556310 MAGEB6Q8N7X4 407 aa14.02□□□□□ -0.17
SLIRP-205ENST00000556310 SH3RF3Q8TEJ3 882 aaPredicted RBP14.02□□□□□ -0.17
SLIRP-205ENST00000556310 OPTNQ96CV9 577 aa14.02□□□□□ -0.17
SLIRP-205ENST00000556310 OSBPL5Q9H0X9 879 aaPredicted RBP14.02□□□□□ -0.17
SLIRP-205ENST00000556310 ZNF112Q9UJU3 913 aa14.02□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 154.3 ms