RNA–Protein interactions for RNA: ENST00000556274.5

ATXN3-237, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 913 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-237ENST00000556274 ENAMQ9NRM1 1142 aa6.35□□□□□ -1.39
ATXN3-237ENST00000556274 ZFATQ9P243 1243 aa6.35□□□□□ -1.39
ATXN3-237ENST00000556274 BRPF3Q9ULD4 1205 aa6.35□□□□□ -1.39
ATXN3-237ENST00000556274 TTC21AQ8NDW8 1320 aa6.34□□□□□ -1.39
ATXN3-237ENST00000556274 MAP3K6O95382 1288 aa6.34□□□□□ -1.39
ATXN3-237ENST00000556274 EPXP11678 715 aa6.34□□□□□ -1.39
ATXN3-237ENST00000556274 ALAS2P22557 587 aa6.34□□□□□ -1.39
ATXN3-237ENST00000556274 AMPHP49418 695 aa6.34□□□□□ -1.39
ATXN3-237ENST00000556274 ARHGAP4P98171 946 aa6.34□□□□□ -1.39
ATXN3-237ENST00000556274 TOM1L2Q6ZVM7 507 aa6.34□□□□□ -1.39
ATXN3-237ENST00000556274 KCNH5Q8NCM2 988 aa6.34□□□□□ -1.39
ATXN3-237ENST00000556274 NEDD1Q8NHV4 660 aa6.34□□□□□ -1.39
ATXN3-237ENST00000556274 PUS7Q96PZ0 661 aaKnown RBP6.34□□□□□ -1.39
ATXN3-237ENST00000556274 UBE2OQ9C0C9 1292 aaKnown RBP6.34□□□□□ -1.39
ATXN3-237ENST00000556274 PANK3Q9H999 370 aa6.34□□□□□ -1.39
ATXN3-237ENST00000556274 LRRC4BQ9NT99 713 aa6.34□□□□□ -1.39
ATXN3-237ENST00000556274 A0A1W2PP64 1363 aa6.33□□□□□ -1.4
ATXN3-237ENST00000556274 SBNO2Q9Y2G9 1366 aa6.33□□□□□ -1.4
ATXN3-237ENST00000556274 MYOM1P52179 1685 aa6.33□□□□□ -1.4
ATXN3-237ENST00000556274 SHISA8B8ZZ34 492 aa6.33□□□□□ -1.4
ATXN3-237ENST00000556274 AMPD1P23109 780 aa6.33□□□□□ -1.4
ATXN3-237ENST00000556274 USP5P45974 858 aa6.33□□□□□ -1.4
ATXN3-237ENST00000556274 TTC39BQ5VTQ0 682 aaPredicted RBP6.33□□□□□ -1.4
ATXN3-237ENST00000556274 DHX32Q7L7V1 743 aaKnown RBP6.33□□□□□ -1.4
ATXN3-237ENST00000556274 ZNF438Q7Z4V0 828 aa6.33□□□□□ -1.4
ATXN3-237ENST00000556274 TNFRSF25Q93038 417 aa6.33□□□□□ -1.4
ATXN3-237ENST00000556274 BTBD6Q96KE9 485 aa6.33□□□□□ -1.4
ATXN3-237ENST00000556274 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.33□□□□□ -1.4
ATXN3-237ENST00000556274 CPSF1Q10570 1443 aaKnown RBP6.33□□□□□ -1.4
ATXN3-237ENST00000556274 BRD4O60885 1362 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-237ENST00000556274 ELOA3CA0A087WX78 387 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-237ENST00000556274 A6NHS1 94 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 ELOA3DA6NLF2 546 aaPredicted RBP6.32□□□□□ -1.4
ATXN3-237ENST00000556274 ADARB2-AS1A8MUL3 147 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 FYB1O15117 783 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 NDUFB5O43674 189 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 MMP20O60882 483 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 PSAPP07602 524 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 VPS72Q15906 364 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 ELOA3BQ3SY89 546 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 PDE12Q6L8Q7 609 aaKnown RBP6.32□□□□□ -1.4
ATXN3-237ENST00000556274 ELOA3Q8NG57 546 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 KRTAP9-9Q9BYP9 154 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 KRTAP9-4Q9BYQ2 154 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 ELP3Q9H9T3 547 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 NLRP2Q9NX02 1062 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 DNAJB12Q9NXW2 375 aaKnown RBP6.32□□□□□ -1.4
ATXN3-237ENST00000556274 TLR7Q9NYK1 1049 aaKnown RBP6.32□□□□□ -1.4
ATXN3-237ENST00000556274 KNSTRNQ9Y448 316 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 BCL9LQ86UU0 1499 aa6.32□□□□□ -1.4
ATXN3-237ENST00000556274 EDC4Q6P2E9 1401 aaKnown RBP6.32□□□□□ -1.4
ATXN3-237ENST00000556274 COL18A1P39060 1754 aa6.31□□□□□ -1.4
ATXN3-237ENST00000556274 NRAPQ86VF7 1730 aa6.31□□□□□ -1.4
ATXN3-237ENST00000556274 CD163L1Q9NR16 1453 aa6.31□□□□□ -1.4
ATXN3-237ENST00000556274 ZEB1P37275 1124 aaPredicted RBP6.31□□□□□ -1.4
ATXN3-237ENST00000556274 ADH7P40394 386 aa6.31□□□□□ -1.4
ATXN3-237ENST00000556274 EHHADHQ08426 723 aa6.31□□□□□ -1.4
ATXN3-237ENST00000556274 PDE3BQ13370 1112 aa6.31□□□□□ -1.4
ATXN3-237ENST00000556274 RRS1Q15050 365 aaKnown RBP6.31□□□□□ -1.4
ATXN3-237ENST00000556274 PCSK7Q16549 785 aa6.31□□□□□ -1.4
ATXN3-237ENST00000556274 XKR5Q6UX68 686 aa6.31□□□□□ -1.4
ATXN3-237ENST00000556274 MORC1Q86VD1 984 aa6.31□□□□□ -1.4
ATXN3-237ENST00000556274 RRAGCQ9HB90 399 aa6.31□□□□□ -1.4
ATXN3-237ENST00000556274 NRKQ7Z2Y5 1582 aa6.31□□□□□ -1.4
ATXN3-237ENST00000556274 ANKRD36BQ8N2N9 1353 aa6.31□□□□□ -1.4
ATXN3-237ENST00000556274 NINLQ9Y2I6 1382 aa6.31□□□□□ -1.4
ATXN3-237ENST00000556274 ANKRD26Q9UPS8 1709 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 CGNL1Q0VF96 1302 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 CNTNAP5Q8WYK1 1306 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 CAMTA1Q9Y6Y1 1673 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 ZBTB42B2RXF5 422 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 MLLT1Q03111 559 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-237ENST00000556274 PLAURQ03405 335 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 CC2D1BQ5T0F9 858 aaKnown RBP6.3□□□□□ -1.4
ATXN3-237ENST00000556274 CHSY3Q70JA7 882 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 ARHGEF25Q86VW2 580 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 GJD3Q8N144 294 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 TRPM4Q8TD43 1214 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 ABI2Q9NYB9 513 aaPredicted RBP6.3□□□□□ -1.4
ATXN3-237ENST00000556274 TMEM63CQ9P1W3 806 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 SLC6A14Q9UN76 642 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 ATRNO75882 1429 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 NSD3Q9BZ95 1437 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 SLIT2O94813 1529 aa6.3□□□□□ -1.4
ATXN3-237ENST00000556274 USP19O94966 1318 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 KIF7Q2M1P5 1343 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 SPATA31A5Q5VU36 1347 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 SPATA31A7Q8IWB4 1347 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 GLI3P10071 1580 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 MAPK1P28482 360 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 NRLP54845 237 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 HFE2Q6ZVN8 426 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 SSH2Q76I76 1423 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 KRT27Q7Z3Y8 459 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 FAM35AQ86V20 835 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 TCP11L2Q8N4U5 519 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 ANKRD24Q8TF21 1146 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 CITED4Q96RK1 184 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 MDFIQ99750 246 aa6.29□□□□□ -1.4
ATXN3-237ENST00000556274 GZF1Q9H116 711 aaPredicted RBP6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms