RNA–Protein interactions for RNA: ENST00000556166.2

GABRB3-210, Transcript of gamma-aminobutyric acid type A receptor beta3 subunit, humanhuman

TSL 2

Gene GABRB3, Length 1,583 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABRB3-210ENST00000556166 CHADLQ6NUI6 762 aa13.77□□□□□ -0.21
GABRB3-210ENST00000556166 ESYT1Q9BSJ8 1104 aa13.77□□□□□ -0.21
GABRB3-210ENST00000556166 EPB41L4AQ9HCS5 686 aaPredicted RBP13.77□□□□□ -0.21
GABRB3-210ENST00000556166 DCP1AQ9NPI6 582 aaPredicted RBP13.77□□□□□ -0.21
GABRB3-210ENST00000556166 TMOD2Q9NZR1 351 aa13.77□□□□□ -0.21
GABRB3-210ENST00000556166 FLT1P17948 1338 aa13.76□□□□□ -0.21
GABRB3-210ENST00000556166 CCDC171Q6TFL3 1326 aa13.76□□□□□ -0.21
GABRB3-210ENST00000556166 DDTLA6NHG4 134 aaPredicted RBP13.76□□□□□ -0.21
GABRB3-210ENST00000556166 ENTPD3O75355 529 aa13.76□□□□□ -0.21
GABRB3-210ENST00000556166 SLURP2P0DP57 97 aa13.76□□□□□ -0.21
GABRB3-210ENST00000556166 CDC37L1Q7L3B6 337 aa13.76□□□□□ -0.21
GABRB3-210ENST00000556166 FAM83AQ86UY5 434 aa13.76□□□□□ -0.21
GABRB3-210ENST00000556166 CERS3Q8IU89 383 aa13.76□□□□□ -0.21
GABRB3-210ENST00000556166 APOBEC3FQ8IUX4 373 aaKnown RBP13.76□□□□□ -0.21
GABRB3-210ENST00000556166 FAM151AQ8WW52 585 aa13.76□□□□□ -0.21
GABRB3-210ENST00000556166 OSBPL5Q9H0X9 879 aaPredicted RBP13.76□□□□□ -0.21
GABRB3-210ENST00000556166 SAP30BPQ9UHR5 308 aaKnown RBP13.76□□□□□ -0.21
GABRB3-210ENST00000556166 CYP2D6P10635 497 aa13.75□□□□□ -0.21
GABRB3-210ENST00000556166 HSPD1P10809 573 aaKnown RBP13.75□□□□□ -0.21
GABRB3-210ENST00000556166 USP5P45974 858 aa13.75□□□□□ -0.21
GABRB3-210ENST00000556166 PTH1RQ03431 593 aa13.75□□□□□ -0.21
GABRB3-210ENST00000556166 NBPF12Q5TAG4 269 aaPredicted RBP13.75□□□□□ -0.21
GABRB3-210ENST00000556166 SULF1Q8IWU6 871 aa13.75□□□□□ -0.21
GABRB3-210ENST00000556166 PALD1Q9ULE6 856 aa13.75□□□□□ -0.21
GABRB3-210ENST00000556166 CYP2D7A0A087X1C5 515 aa13.75□□□□□ -0.21
GABRB3-210ENST00000556166 TOMM70O94826 608 aa13.75□□□□□ -0.21
GABRB3-210ENST00000556166 GNAT2P19087 354 aa13.75□□□□□ -0.21
GABRB3-210ENST00000556166 IFNL3Q8IZI9 196 aa13.75□□□□□ -0.21
GABRB3-210ENST00000556166 RBM46Q8TBY0 533 aaKnown RBP13.75□□□□□ -0.21
GABRB3-210ENST00000556166 RUFY2Q8WXA3 655 aa13.75□□□□□ -0.21
GABRB3-210ENST00000556166 ATP8A2Q9NTI2 1148 aa13.75□□□□□ -0.21
GABRB3-210ENST00000556166 MYH7P12883 1935 aa13.74□□□□□ -0.21
GABRB3-210ENST00000556166 APPP05067 770 aa13.74□□□□□ -0.21
GABRB3-210ENST00000556166 PLCD1P51178 756 aa13.74□□□□□ -0.21
GABRB3-210ENST00000556166 TNFAIP1Q13829 316 aa13.74□□□□□ -0.21
GABRB3-210ENST00000556166 SLC4A8Q2Y0W8 1093 aa13.74□□□□□ -0.21
GABRB3-210ENST00000556166 CTR9Q6PD62 1173 aa13.74□□□□□ -0.21
GABRB3-210ENST00000556166 CDCA5Q96FF9 252 aa13.74□□□□□ -0.21
GABRB3-210ENST00000556166 RAD50Q92878 1312 aa13.73□□□□□ -0.21
GABRB3-210ENST00000556166 USP17L12C9JPN9 530 aa13.73□□□□□ -0.21
GABRB3-210ENST00000556166 USP17L21D6R901 530 aa13.73□□□□□ -0.21
GABRB3-210ENST00000556166 FGAP02671 866 aa13.73□□□□□ -0.21
GABRB3-210ENST00000556166 TNNI2P48788 182 aa13.73□□□□□ -0.21
GABRB3-210ENST00000556166 ALX1Q15699 326 aa13.73□□□□□ -0.21
GABRB3-210ENST00000556166 GIMAP6Q6P9H5 292 aa13.73□□□□□ -0.21
GABRB3-210ENST00000556166 LSG1Q9H089 658 aaKnown RBP13.73□□□□□ -0.21
GABRB3-210ENST00000556166 MCM9Q9NXL9 1143 aa13.73□□□□□ -0.21
GABRB3-210ENST00000556166 PPP2R3BQ9Y5P8 575 aa13.73□□□□□ -0.21
GABRB3-210ENST00000556166 RPAP1Q9BWH6 1393 aaPredicted RBP13.73□□□□□ -0.21
GABRB3-210ENST00000556166 POLR2AP24928 1970 aaKnown RBP13.72□□□□□ -0.21
GABRB3-210ENST00000556166 SEC24BO95487 1268 aa13.72□□□□□ -0.21
GABRB3-210ENST00000556166 C8orf34Q49A92 452 aa13.72□□□□□ -0.21
GABRB3-210ENST00000556166 SMC1BQ8NDV3 1235 aa13.72□□□□□ -0.21
GABRB3-210ENST00000556166 FZD1Q9UP38 647 aa13.72□□□□□ -0.21
GABRB3-210ENST00000556166 ATRNL1Q5VV63 1379 aa13.71□□□□□ -0.21
GABRB3-210ENST00000556166 MFAP1P55081 439 aaKnown RBP13.71□□□□□ -0.21
GABRB3-210ENST00000556166 SBK1Q52WX2 424 aa13.71□□□□□ -0.21
GABRB3-210ENST00000556166 C12orf60Q5U649 245 aa13.71□□□□□ -0.21
GABRB3-210ENST00000556166 CST9Q5W186 159 aa13.71□□□□□ -0.21
GABRB3-210ENST00000556166 CASC1Q6TDU7 716 aa13.71□□□□□ -0.21
GABRB3-210ENST00000556166 MIGA2Q7L4E1 593 aa13.71□□□□□ -0.21
GABRB3-210ENST00000556166 ZSCAN29Q8IWY8 852 aaPredicted RBP13.71□□□□□ -0.21
GABRB3-210ENST00000556166 MAP4K1Q92918 833 aa13.71□□□□□ -0.21
GABRB3-210ENST00000556166 DSCC1Q9BVC3 393 aa13.71□□□□□ -0.21
GABRB3-210ENST00000556166 TACC3Q9Y6A5 838 aa13.71□□□□□ -0.21
GABRB3-210ENST00000556166 PASKQ96RG2 1323 aa13.71□□□□□ -0.21
GABRB3-210ENST00000556166 SSC5DA1L4H1 1573 aa13.71□□□□□ -0.21
GABRB3-210ENST00000556166 FAM196BA6NMK8 535 aa13.71□□□□□ -0.22
GABRB3-210ENST00000556166 POLR3DP05423 398 aaPredicted RBP13.71□□□□□ -0.22
GABRB3-210ENST00000556166 MAP3K10Q02779 954 aa13.71□□□□□ -0.22
GABRB3-210ENST00000556166 METTL16Q86W50 562 aaKnown RBP13.71□□□□□ -0.22
GABRB3-210ENST00000556166 DYNLL2Q96FJ2 89 aa13.71□□□□□ -0.22
GABRB3-210ENST00000556166 CSRNP1Q96S65 589 aa13.71□□□□□ -0.22
GABRB3-210ENST00000556166 DHX36Q9H2U1 1008 aaKnown RBP13.71□□□□□ -0.22
GABRB3-210ENST00000556166 DNAJC18Q9H819 358 aa13.71□□□□□ -0.22
GABRB3-210ENST00000556166 AK9Q5TCS8 1911 aa13.7□□□□□ -0.22
GABRB3-210ENST00000556166 TDO2P48775 406 aa13.7□□□□□ -0.22
GABRB3-210ENST00000556166 GABPAQ06546 454 aa13.7□□□□□ -0.22
GABRB3-210ENST00000556166 RRP1BQ14684 758 aaKnown RBP13.7□□□□□ -0.22
GABRB3-210ENST00000556166 MOB2Q70IA6 237 aa13.7□□□□□ -0.22
GABRB3-210ENST00000556166 NACAP1Q9BZK3 213 aa13.7□□□□□ -0.22
GABRB3-210ENST00000556166 NBPF3Q9H094 633 aa13.7□□□□□ -0.22
GABRB3-210ENST00000556166 NAPBQ9H115 298 aa13.7□□□□□ -0.22
GABRB3-210ENST00000556166 ANO2Q9NQ90 1003 aa13.7□□□□□ -0.22
GABRB3-210ENST00000556166 INCENPQ9NQS7 918 aa13.7□□□□□ -0.22
GABRB3-210ENST00000556166 PI4KBQ9UBF8 816 aa13.7□□□□□ -0.22
GABRB3-210ENST00000556166 TAF6LQ9Y6J9 622 aa13.7□□□□□ -0.22
GABRB3-210ENST00000556166 COL2A1P02458 1487 aaPredicted RBP13.69□□□□□ -0.22
GABRB3-210ENST00000556166 MINDY4BA8MYZ0 360 aa13.69□□□□□ -0.22
GABRB3-210ENST00000556166 USP2O75604 605 aaPredicted RBP13.69□□□□□ -0.22
GABRB3-210ENST00000556166 FSTL1Q12841 308 aa13.69□□□□□ -0.22
GABRB3-210ENST00000556166 SUPT20HL1Q3ZLR7 823 aa13.69□□□□□ -0.22
GABRB3-210ENST00000556166 ECM29Q5VYK3 1845 aa13.69□□□□□ -0.22
GABRB3-210ENST00000556166 PHF20L1A8MW92 1017 aa13.68□□□□□ -0.22
GABRB3-210ENST00000556166 TBC1D12O60347 775 aa13.68□□□□□ -0.22
GABRB3-210ENST00000556166 CELF2O95319 508 aaKnown RBP13.68□□□□□ -0.22
GABRB3-210ENST00000556166 HAND2P61296 217 aa13.68□□□□□ -0.22
GABRB3-210ENST00000556166 CTDSPL2Q05D32 466 aa13.68□□□□□ -0.22
GABRB3-210ENST00000556166 PRKG1Q13976 671 aa13.68□□□□□ -0.22
GABRB3-210ENST00000556166 KIAA1211Q6ZU35 1233 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms