RNA–Protein interactions for RNA: ENST00000556011.5

PSEN1-215, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 442 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-215ENST00000556011 RASIP1Q5U651 963 aa10.7□□□□□ -0.7
PSEN1-215ENST00000556011 ZNF530Q6P9A1 599 aaPredicted RBP10.7□□□□□ -0.7
PSEN1-215ENST00000556011 CERS4Q9HA82 394 aa10.7□□□□□ -0.7
PSEN1-215ENST00000556011 A1BGP04217 495 aa10.69□□□□□ -0.7
PSEN1-215ENST00000556011 PRKAR2AP13861 404 aaKnown RBP10.69□□□□□ -0.7
PSEN1-215ENST00000556011 MYOGP15173 224 aa10.69□□□□□ -0.7
PSEN1-215ENST00000556011 TNNT2P45379 298 aaPredicted RBP10.69□□□□□ -0.7
PSEN1-215ENST00000556011 SERBP1Q8NC51 408 aaKnown RBP eCLIP10.69□□□□□ -0.7
PSEN1-215ENST00000556011 HINFPQ9BQA5 517 aa10.69□□□□□ -0.7
PSEN1-215ENST00000556011 BSDC1Q9NW68 430 aaPredicted RBP10.69□□□□□ -0.7
PSEN1-215ENST00000556011 RALGAPA2Q2PPJ7 1873 aa10.69□□□□□ -0.7
PSEN1-215ENST00000556011 ZNF536O15090 1300 aa10.68□□□□□ -0.7
PSEN1-215ENST00000556011 SH3TC1Q8TE82 1336 aa10.68□□□□□ -0.7
PSEN1-215ENST00000556011 MAP3K13O43283 966 aa10.68□□□□□ -0.7
PSEN1-215ENST00000556011 VGLL4Q14135 290 aa10.68□□□□□ -0.7
PSEN1-215ENST00000556011 SUPT20HL1Q3ZLR7 823 aa10.68□□□□□ -0.7
PSEN1-215ENST00000556011 MAP3K21Q5TCX8 1036 aa10.68□□□□□ -0.7
PSEN1-215ENST00000556011 HDGFL2Q7Z4V5 671 aaPredicted RBP10.68□□□□□ -0.7
PSEN1-215ENST00000556011 DCLK2Q8N568 766 aa10.68□□□□□ -0.7
PSEN1-215ENST00000556011 BBOX1O75936 387 aa10.67□□□□□ -0.7
PSEN1-215ENST00000556011 RAG1P15918 1043 aa10.67□□□□□ -0.7
PSEN1-215ENST00000556011 SLC39A5Q6ZMH5 540 aa10.67□□□□□ -0.7
PSEN1-215ENST00000556011 C16orf59Q7L2K0 433 aa10.67□□□□□ -0.7
PSEN1-215ENST00000556011 ADHFE1Q8IWW8 467 aa10.67□□□□□ -0.7
PSEN1-215ENST00000556011 PRKAG3Q9UGI9 489 aa10.67□□□□□ -0.7
PSEN1-215ENST00000556011 CEMIPQ8WUJ3 1361 aa10.66□□□□□ -0.7
PSEN1-215ENST00000556011 POLQO75417 2590 aa10.66□□□□□ -0.7
PSEN1-215ENST00000556011 C6orf229H3BNL8 230 aa10.66□□□□□ -0.7
PSEN1-215ENST00000556011 ARHGAP6O43182 974 aa10.66□□□□□ -0.7
PSEN1-215ENST00000556011 LMNAP02545 664 aaKnown RBP10.66□□□□□ -0.7
PSEN1-215ENST00000556011 RABGGTBP53611 331 aa10.66□□□□□ -0.7
PSEN1-215ENST00000556011 SNAPC2Q13487 334 aa10.66□□□□□ -0.7
PSEN1-215ENST00000556011 TMEM240Q5SV17 173 aa10.66□□□□□ -0.7
PSEN1-215ENST00000556011 POLLQ9UGP5 575 aa10.66□□□□□ -0.7
PSEN1-215ENST00000556011 UBR2Q8IWV8 1755 aa10.65□□□□□ -0.7
PSEN1-215ENST00000556011 IRF6O14896 467 aa10.65□□□□□ -0.7
PSEN1-215ENST00000556011 CYP2C8P10632 490 aa10.65□□□□□ -0.7
PSEN1-215ENST00000556011 SDHBP21912 280 aa10.65□□□□□ -0.7
PSEN1-215ENST00000556011 ZXDAP98168 799 aa10.65□□□□□ -0.7
PSEN1-215ENST00000556011 APLP2Q06481 763 aa10.65□□□□□ -0.7
PSEN1-215ENST00000556011 PPM1JQ5JR12 505 aa10.65□□□□□ -0.7
PSEN1-215ENST00000556011 ANKRD23Q86SG2 305 aa10.65□□□□□ -0.7
PSEN1-215ENST00000556011 TRIB2Q92519 343 aa10.65□□□□□ -0.7
PSEN1-215ENST00000556011 COA7Q96BR5 231 aa10.65□□□□□ -0.7
PSEN1-215ENST00000556011 NYXQ9GZU5 481 aa10.65□□□□□ -0.7
PSEN1-215ENST00000556011 DAGLAQ9Y4D2 1042 aa10.65□□□□□ -0.7
PSEN1-215ENST00000556011 LRRC37AA6NMS7 1700 aa10.64□□□□□ -0.71
PSEN1-215ENST00000556011 DNHD1Q96M86 4753 aa10.64□□□□□ -0.71
PSEN1-215ENST00000556011 SRRM3A6NNA2 597 aaPredicted RBP10.64□□□□□ -0.71
PSEN1-215ENST00000556011 CCND3P30281 292 aaPredicted RBP10.64□□□□□ -0.71
PSEN1-215ENST00000556011 PIP4K2AP48426 406 aaPredicted RBP10.64□□□□□ -0.71
PSEN1-215ENST00000556011 SRSF1Q07955 248 aaKnown RBP eCLIP10.64□□□□□ -0.71
PSEN1-215ENST00000556011 PUS10Q3MIT2 529 aaKnown RBP10.64□□□□□ -0.71
PSEN1-215ENST00000556011 AKAP13Q12802 2813 aa10.64□□□□□ -0.71
PSEN1-215ENST00000556011 CREBBPQ92793 2442 aa10.63□□□□□ -0.71
PSEN1-215ENST00000556011 C1QTNF9BB2RNN3 333 aa10.63□□□□□ -0.71
PSEN1-215ENST00000556011 C1QTNF9P0C862 333 aa10.63□□□□□ -0.71
PSEN1-215ENST00000556011 TLE2Q04725 743 aa10.63□□□□□ -0.71
PSEN1-215ENST00000556011 TMC1Q8TDI8 760 aa10.63□□□□□ -0.71
PSEN1-215ENST00000556011 NSFL1CQ9UNZ2 370 aaKnown RBP10.63□□□□□ -0.71
PSEN1-215ENST00000556011 TACC3Q9Y6A5 838 aa10.63□□□□□ -0.71
PSEN1-215ENST00000556011 SPDYE5A6NIY4 337 aa10.62□□□□□ -0.71
PSEN1-215ENST00000556011 H3BQ06 376 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-215ENST00000556011 PDGFBP01127 241 aaPredicted RBP10.62□□□□□ -0.71
PSEN1-215ENST00000556011 RIPPLY3P57055 190 aa10.62□□□□□ -0.71
PSEN1-215ENST00000556011 HLFQ16534 295 aa10.62□□□□□ -0.71
PSEN1-215ENST00000556011 ASIC4Q96FT7 647 aa10.62□□□□□ -0.71
PSEN1-215ENST00000556011 MXD3Q9BW11 206 aa10.62□□□□□ -0.71
PSEN1-215ENST00000556011 SLC52A2Q9HAB3 445 aa10.62□□□□□ -0.71
PSEN1-215ENST00000556011 COL4A1P02462 1669 aa10.62□□□□□ -0.71
PSEN1-215ENST00000556011 ADAMTS20P59510 1910 aa10.62□□□□□ -0.71
PSEN1-215ENST00000556011 PLXNB2O15031 1838 aa10.61□□□□□ -0.71
PSEN1-215ENST00000556011 KIAA0355O15063 1070 aa10.61□□□□□ -0.71
PSEN1-215ENST00000556011 RBM25P49756 843 aaKnown RBP10.61□□□□□ -0.71
PSEN1-215ENST00000556011 GRB10Q13322 594 aa10.61□□□□□ -0.71
PSEN1-215ENST00000556011 PLEKHO1Q53GL0 409 aaPredicted RBP10.61□□□□□ -0.71
PSEN1-215ENST00000556011 OGFOD1Q8N543 542 aa10.61□□□□□ -0.71
PSEN1-215ENST00000556011 BBC3Q96PG8 261 aaPredicted RBP10.61□□□□□ -0.71
PSEN1-215ENST00000556011 SLC12A5Q9H2X9 1139 aa10.61□□□□□ -0.71
PSEN1-215ENST00000556011 CACNA2D2Q9NY47 1150 aa10.61□□□□□ -0.71
PSEN1-215ENST00000556011 NOTCH2Q04721 2471 aa10.61□□□□□ -0.71
PSEN1-215ENST00000556011 G3V3G9 751 aa10.6□□□□□ -0.71
PSEN1-215ENST00000556011 MAP3K9P80192 1104 aa10.6□□□□□ -0.71
PSEN1-215ENST00000556011 CACNB2Q08289 660 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-215ENST00000556011 SNX17Q15036 470 aa10.6□□□□□ -0.71
PSEN1-215ENST00000556011 C1orf141Q5JVX7 400 aa10.6□□□□□ -0.71
PSEN1-215ENST00000556011 DCAF8Q5TAQ9 597 aa10.6□□□□□ -0.71
PSEN1-215ENST00000556011 ZNF365Q70YC5 407 aa10.6□□□□□ -0.71
PSEN1-215ENST00000556011 KDF1Q8NAX2 398 aaPredicted RBP10.6□□□□□ -0.71
PSEN1-215ENST00000556011 ARNTL2Q8WYA1 636 aa10.6□□□□□ -0.71
PSEN1-215ENST00000556011 PARK7Q99497 189 aaKnown RBP10.6□□□□□ -0.71
PSEN1-215ENST00000556011 MPHOSPH9Q99550 1183 aa10.6□□□□□ -0.71
PSEN1-215ENST00000556011 CDV3Q9UKY7 258 aaKnown RBP10.6□□□□□ -0.71
PSEN1-215ENST00000556011 PPP2R3BQ9Y5P8 575 aa10.6□□□□□ -0.71
PSEN1-215ENST00000556011 PHIPQ8WWQ0 1821 aa10.6□□□□□ -0.71
PSEN1-215ENST00000556011 CLTBP09497 229 aa10.59□□□□□ -0.71
PSEN1-215ENST00000556011 SLC5A1P13866 664 aa10.59□□□□□ -0.71
PSEN1-215ENST00000556011 SIGLEC14Q08ET2 396 aa10.59□□□□□ -0.71
PSEN1-215ENST00000556011 KIF12Q96FN5 646 aa10.59□□□□□ -0.71
PSEN1-215ENST00000556011 RTKNQ9BST9 563 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms