RNA–Protein interactions for RNA: ENST00000555872.5

EFCAB11-208, Transcript of EF-hand calcium binding domain 11, humanhuman

TSL 1 (best) BASIC

Gene EFCAB11, Length 2,716 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFCAB11-208ENST00000555872 MRFAP1Q9Y605 127 aa11.79□□□□□ -0.52
EFCAB11-208ENST00000555872 MARF1Q9Y4F3 1742 aaKnown RBP11.79□□□□□ -0.52
EFCAB11-208ENST00000555872 BDNFP23560 247 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 RAB27AP51159 221 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 ME3Q16798 604 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 ARMCX5Q6P1M9 558 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 KCNN1Q92952 543 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 PHACTR1Q9C0D0 580 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 SPG7Q9UQ90 795 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 KIAA0232Q92628 1395 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 IQCJ-SCHIP1C9J366 451 aaPredicted RBP11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 CREB3O43889 395 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 CCDC175P0C221 793 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 SFPQP23246 707 aaKnown RBP eCLIP11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 STX1AQ16623 288 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 LRRFIP1Q32MZ4 808 aaKnown RBP11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 PREPLQ4J6C6 727 aaPredicted RBP11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 HSP90B2PQ58FF3 399 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 CWC27Q6UX04 472 aaKnown RBP11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 KIAA0825Q8IV33 1275 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 DHX40Q8IX18 779 aaKnown RBP11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 ZBTB10Q96DT7 871 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 RBM33Q96EV2 1170 aaKnown RBP11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 TRIM11Q96F44 468 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 COG3Q96JB2 828 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 SPATA7Q9P0W8 599 aa11.78□□□□□ -0.52
EFCAB11-208ENST00000555872 PHLPP2Q6ZVD8 1323 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 AHDC1Q5TGY3 1603 aaPredicted RBP11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 FANCGO15287 622 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 KIF5CO60282 957 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 RAB11FIP3O75154 756 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 RTN2O75298 545 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 CORO7P57737 925 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 SYNE3Q6ZMZ3 975 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 TMC6Q7Z403 805 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 HS6ST3Q8IZP7 471 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 AOPEPQ8N6M6 819 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 JAKMIP1Q96N16 626 aaKnown RBP11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 PARD6BQ9BYG5 372 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 UBA5Q9GZZ9 404 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 OSBPL5Q9H0X9 879 aaPredicted RBP11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 ZSCAN16Q9H4T2 348 aaPredicted RBP11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 MKS1Q9NXB0 559 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 TMEM98Q9Y2Y6 226 aa11.77□□□□□ -0.52
EFCAB11-208ENST00000555872 LRRC10BA6NIK2 292 aa11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 SGSM2O43147 1006 aa11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 VCAM1P19320 739 aa11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 GJA8P48165 433 aa11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 ADCK5Q3MIX3 580 aa11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 GBP6Q6ZN66 633 aa11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 ARMC9Q7Z3E5 817 aa11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 PROSER2Q86WR7 435 aaPredicted RBP11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 GPR161Q8N6U8 529 aaKnown RBP11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 CTCFLQ8NI51 663 aaPredicted RBP11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 AGBL1Q96MI9 1066 aa11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 MTRQ99707 1265 aa11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 LSG1Q9H089 658 aaKnown RBP11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 C19orf44Q9H6X5 657 aa11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 KIF9Q9HAQ2 790 aa11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 SH2B1Q9NRF2 756 aaPredicted RBP11.77□□□□□ -0.53
EFCAB11-208ENST00000555872 TUBB4AP04350 444 aa11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 NBPF7P0C2Y1 421 aaPredicted RBP11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 CYP11B2P19099 503 aa11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 LONRF2Q1L5Z9 754 aa11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 ACBD5Q5T8D3 534 aaPredicted RBP11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 NME9Q86XW9 330 aa11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 RBM17Q96I25 401 aaKnown RBP11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 ZSCAN31Q96LW9 406 aaPredicted RBP11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 POLR3CQ9BUI4 534 aaPredicted RBP11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 PLEKHA4Q9H4M7 779 aa11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 PDE11AQ9HCR9 933 aa11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 IL1RAPL2Q9NP60 686 aa11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 ANKIB1Q9P2G1 1089 aa11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 PARP3Q9Y6F1 533 aa11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 F8VZ95 297 aa11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 PRPHP41219 470 aa11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 PTK7Q13308 1070 aa11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 ARHGAP27Q6ZUM4 889 aa11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 NGDNQ8NEJ9 315 aaKnown RBP11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 N4BP2L2Q92802 583 aaPredicted RBP11.76□□□□□ -0.53
EFCAB11-208ENST00000555872 F6X3S4 739 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 MYO1BO43795 1136 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 MYCLP1P12525 358 aaPredicted RBP11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 STIP1P31948 543 aaKnown RBP11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 DBN1Q16643 649 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 VPS53Q5VIR6 699 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 TRIM65Q6PJ69 517 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 SPATA21Q7Z572 469 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 NUTM1Q86Y26 1132 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 SAMD3Q8N6K7 520 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 CCDC150Q8NCX0 1101 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 IMPACTQ9P2X3 320 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 STAP2Q9UGK3 403 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 MAPK8IP1Q9UQF2 711 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 RDXP35241 583 aaKnown RBP11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 APLP1P51693 650 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 CEBPZQ03701 1054 aaKnown RBP11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 PKN1Q16512 942 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 SKIDA1Q1XH10 827 aa11.75□□□□□ -0.53
EFCAB11-208ENST00000555872 CYP46A1Q9Y6A2 500 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms