RNA–Protein interactions for RNA: ENST00000555858.1

MTHFD1-212, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 5

Gene MTHFD1, Length 386 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-212ENST00000555858 SPC25Q9HBM1 224 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 IFT57Q9NWB7 429 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 TMEM260Q9NX78 707 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 PCDHA4Q9UN74 947 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 NOP58Q9Y2X3 529 aaKnown RBP4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 SLC12A7Q9Y666 1083 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 TACC3Q9Y6A5 838 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 SNCAIPQ9Y6H5 919 aa4.29□□□□□ -1.72
MTHFD1-212ENST00000555858 ESYT3A0FGR9 886 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 NEURL1BA8MQ27 555 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 GFRA2O00451 464 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 DDAH1O94760 285 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 HTR3BO95264 441 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 SNRPBP14678 240 aaKnown RBP4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 SELPP16109 830 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 ANAPC15P60006 121 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 GRIK5Q16478 980 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 C2orf27AQ580R0 203 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 RUFY4Q6ZNE9 571 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 C16orf86Q6ZW13 317 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 HDXQ7Z353 690 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 FILIP1Q7Z7B0 1213 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 KIAA0907Q7Z7F0 614 aaPredicted RBP4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 TTC6Q86TZ1 520 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 FAM178BQ8IXR5 827 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 IL22RA1Q8N6P7 574 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 ZSCAN1Q8NBB4 408 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 ST13P5Q8NFI4 369 aaPredicted RBP4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 THAP3Q8WTV1 239 aaPredicted RBP4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 NUDT8Q8WV74 236 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 SLC7A3Q8WY07 619 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 ZNF669Q96BR6 464 aaPredicted RBP4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 ZC3H12CQ9C0D7 883 aaKnown RBP4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 ANTXR1Q9H6X2 564 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 OSGEPQ9NPF4 335 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 PPME1Q9Y570 386 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 COL4A3BPQ9Y5P4 624 aa4.28□□□□□ -1.72
MTHFD1-212ENST00000555858 LINC01387J3KSC0 135 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 MAOBP27338 520 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 CDC25BP30305 580 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 BAG6P46379 1132 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 CDK8P49336 464 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 PDE4BQ07343 736 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 SQSTM1Q13501 440 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 GAS6Q14393 721 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 INPP5AQ14642 412 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 POU4F3Q15319 338 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 HGSNATQ68CP4 663 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 INTS3Q68E01 1043 aaKnown RBP4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 LRFN4Q6PJG9 635 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 C6orf15Q6UXA7 325 aaPredicted RBP4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 GOLGA6L1Q8N7Z2 621 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 JMYQ8N9B5 988 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 PLPPR2Q96GM1 343 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 FEZ1Q99689 392 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 NRSN2Q9GZP1 204 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 CCDC86Q9H6F5 360 aaKnown RBP4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 JPH1Q9HDC5 661 aaPredicted RBP4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 MBIPQ9NS73 344 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 GMIPQ9P107 970 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 REV1Q9UBZ9 1251 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 GGA1Q9UJY5 639 aa4.27□□□□□ -1.73
MTHFD1-212ENST00000555858 KDM2BQ8NHM5 1336 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 B2RBV5 119 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 C11orf95C9JLR9 678 aaPredicted RBP4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 FSCN2O14926 492 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 EIF5BO60841 1220 aaKnown RBP4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 RAB11FIP3O75154 756 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 ECEL1O95672 775 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 GYS2P54840 703 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 PDE3AQ14432 1141 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 NCAPHQ15003 741 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 KIF4BQ2VIQ3 1234 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 HP1BP3Q5SSJ5 553 aaPredicted RBP4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 OVOS1Q6IE37 1185 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 TXNDC11Q6PKC3 985 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 C20orf204Q6ZNR8 217 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 SLCO4C1Q6ZQN7 724 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 EEPD1Q7L9B9 569 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 SYNPOQ8N3V7 929 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 ELMO3Q96BJ8 720 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 ATG4CQ96DT6 458 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 PCDH12Q9NPG4 1184 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 ZMYM5Q9UJ78 669 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 GDF2Q9UK05 429 aaPredicted RBP4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 LEMD3Q9Y2U8 911 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 STARD13Q9Y3M8 1113 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 CORINQ9Y5Q5 1042 aa4.26□□□□□ -1.73
MTHFD1-212ENST00000555858 SLC22A31A6NKX4 558 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 UPK3BL1B0FP48 263 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 UPK3BL2E5RIL1 263 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 ZNF862O60290 1169 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 DIAPH1O60610 1272 aaKnown RBP4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 ALBP02768 609 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 NME1P15531 152 aaKnown RBP4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 PLCG1P19174 1290 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 AFF1P51825 1210 aaKnown RBP4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 SSRP1Q08945 709 aaKnown RBP4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 TCEA2Q15560 299 aa4.25□□□□□ -1.73
MTHFD1-212ENST00000555858 TMEM201Q5SNT2 666 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms