RNA–Protein interactions for RNA: ENST00000555854.1

VIPAS39-207, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 444 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-207ENST00000555854 ZGPATQ8N5A5 531 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-207ENST00000555854 SPATA5Q8NB90 893 aa11.49□□□□□ -0.57
VIPAS39-207ENST00000555854 NSUN4Q96CB9 384 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-207ENST00000555854 NEUROD6Q96NK8 337 aa11.49□□□□□ -0.57
VIPAS39-207ENST00000555854 ZNF341Q9BYN7 854 aa11.49□□□□□ -0.57
VIPAS39-207ENST00000555854 NOP58Q9Y2X3 529 aaKnown RBP11.49□□□□□ -0.57
VIPAS39-207ENST00000555854 CSADQ9Y600 493 aa11.49□□□□□ -0.57
VIPAS39-207ENST00000555854 GPR75-ASB3A0A0A6YYF3 556 aa11.48□□□□□ -0.57
VIPAS39-207ENST00000555854 DDTLA6NHG4 134 aaPredicted RBP11.48□□□□□ -0.57
VIPAS39-207ENST00000555854 G3BP1Q13283 466 aaKnown RBP eCLIP11.48□□□□□ -0.57
VIPAS39-207ENST00000555854 PPIL2Q13356 520 aa11.48□□□□□ -0.57
VIPAS39-207ENST00000555854 MOGSQ13724 837 aa11.48□□□□□ -0.57
VIPAS39-207ENST00000555854 NOL9Q5SY16 702 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-207ENST00000555854 DCAF15Q66K64 600 aa11.48□□□□□ -0.57
VIPAS39-207ENST00000555854 GPR108Q9NPR9 543 aa11.48□□□□□ -0.57
VIPAS39-207ENST00000555854 DBNLQ9UJU6 430 aaKnown RBP11.48□□□□□ -0.57
VIPAS39-207ENST00000555854 PHIPQ8WWQ0 1821 aa11.48□□□□□ -0.57
VIPAS39-207ENST00000555854 DOCK1Q14185 1865 aa11.48□□□□□ -0.57
VIPAS39-207ENST00000555854 CDK5RAP2Q96SN8 1893 aa11.48□□□□□ -0.57
VIPAS39-207ENST00000555854 PTPRFP10586 1907 aa11.47□□□□□ -0.57
VIPAS39-207ENST00000555854 COL2A1P02458 1487 aaPredicted RBP11.47□□□□□ -0.57
VIPAS39-207ENST00000555854 PHF20L1A8MW92 1017 aa11.47□□□□□ -0.57
VIPAS39-207ENST00000555854 BTBD19C9JJ37 291 aa11.47□□□□□ -0.57
VIPAS39-207ENST00000555854 ENTPD3O75355 529 aa11.47□□□□□ -0.57
VIPAS39-207ENST00000555854 SURF6O75683 361 aaKnown RBP11.47□□□□□ -0.57
VIPAS39-207ENST00000555854 OTOP1Q7RTM1 612 aa11.47□□□□□ -0.57
VIPAS39-207ENST00000555854 ADGRA1Q86SQ6 560 aa11.47□□□□□ -0.57
VIPAS39-207ENST00000555854 ERO1BQ86YB8 467 aa11.47□□□□□ -0.57
VIPAS39-207ENST00000555854 CD99L2Q8TCZ2 262 aa11.47□□□□□ -0.57
VIPAS39-207ENST00000555854 SNRKQ9NRH2 765 aa11.47□□□□□ -0.57
VIPAS39-207ENST00000555854 FRMD4AQ9P2Q2 1039 aaPredicted RBP11.47□□□□□ -0.57
VIPAS39-207ENST00000555854 AK9Q5TCS8 1911 aa11.47□□□□□ -0.57
VIPAS39-207ENST00000555854 FOCADQ5VW36 1801 aa11.46□□□□□ -0.57
VIPAS39-207ENST00000555854 ADGRA2Q96PE1 1338 aa11.46□□□□□ -0.57
VIPAS39-207ENST00000555854 GTF2A2P52657 109 aa11.46□□□□□ -0.57
VIPAS39-207ENST00000555854 MAP3K10Q02779 954 aa11.46□□□□□ -0.57
VIPAS39-207ENST00000555854 PICALMQ13492 652 aa11.46□□□□□ -0.57
VIPAS39-207ENST00000555854 FBXO46Q6PJ61 603 aaPredicted RBP11.46□□□□□ -0.57
VIPAS39-207ENST00000555854 ERICH6Q7L0X2 663 aa11.46□□□□□ -0.57
VIPAS39-207ENST00000555854 EAF2Q96CJ1 260 aaPredicted RBP11.46□□□□□ -0.57
VIPAS39-207ENST00000555854 KCNH4Q9UQ05 1017 aa11.46□□□□□ -0.57
VIPAS39-207ENST00000555854 EXOC6BQ9Y2D4 811 aa11.46□□□□□ -0.57
VIPAS39-207ENST00000555854 FAM196BA6NMK8 535 aa11.45□□□□□ -0.58
VIPAS39-207ENST00000555854 CYP2E1P05181 493 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-207ENST00000555854 UQCRFS1P1P0C7P4 283 aa11.45□□□□□ -0.58
VIPAS39-207ENST00000555854 PPATQ06203 517 aa11.45□□□□□ -0.58
VIPAS39-207ENST00000555854 TAF1CQ15572 869 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-207ENST00000555854 PKN2Q16513 984 aaKnown RBP11.45□□□□□ -0.58
VIPAS39-207ENST00000555854 SPTY2D1Q68D10 685 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-207ENST00000555854 SIRT2Q8IXJ6 389 aa11.45□□□□□ -0.58
VIPAS39-207ENST00000555854 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.45□□□□□ -0.58
VIPAS39-207ENST00000555854 HOOK2Q96ED9 719 aa11.45□□□□□ -0.58
VIPAS39-207ENST00000555854 PIH1D3Q9NQM4 214 aaKnown RBP11.45□□□□□ -0.58
VIPAS39-207ENST00000555854 TRIM17Q9Y577 477 aa11.45□□□□□ -0.58
VIPAS39-207ENST00000555854 NDUFB9Q9Y6M9 179 aa11.45□□□□□ -0.58
VIPAS39-207ENST00000555854 DDX60LQ5H9U9 1706 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 CETPP11597 493 aa11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 ZAP70P43403 619 aa11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 OS9Q13438 667 aaPredicted RBP11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 SNAPC2Q13487 334 aa11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 RRP1BQ14684 758 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 GORABQ5T7V8 394 aa11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 C20orf194Q5TEA3 1177 aa11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 CCDC84Q86UT8 332 aaPredicted RBP11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 ZNF512BQ96KM6 892 aaPredicted RBP11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 ARHGAP39Q9C0H5 1083 aa11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 CCDC8Q9H0W5 538 aaPredicted RBP11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 OSBPL5Q9H0X9 879 aaPredicted RBP11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 RAI14Q9P0K7 980 aa11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 RBBP6Q7Z6E9 1792 aaKnown RBP11.44□□□□□ -0.58
VIPAS39-207ENST00000555854 CTGFP29279 349 aa11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 SP3Q02447 781 aa11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 MLLT1Q03111 559 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 TTC39AQ5SRH9 613 aa11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 OTUD7BQ6GQQ9 843 aa11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 GPAT2Q6NUI2 795 aa11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 SLF2Q8IX21 1173 aa11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 SCYL3Q8IZE3 742 aa11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 SH3RF3Q8TEJ3 882 aaPredicted RBP11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 ERO1AQ96HE7 468 aa11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 DNAJC18Q9H819 358 aa11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 ZCCHC17Q9NP64 241 aaKnown RBP11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 ZBTB40Q9NUA8 1239 aa11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 COG6Q9Y2V7 657 aa11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 ATAD5Q96QE3 1844 aa11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 LOC285556D6RIA3 1793 aa11.43□□□□□ -0.58
VIPAS39-207ENST00000555854 TLR2O60603 784 aa11.42□□□□□ -0.58
VIPAS39-207ENST00000555854 PTPRAP18433 802 aa11.42□□□□□ -0.58
VIPAS39-207ENST00000555854 ANKRD23Q86SG2 305 aa11.42□□□□□ -0.58
VIPAS39-207ENST00000555854 SP7Q8TDD2 431 aaPredicted RBP11.42□□□□□ -0.58
VIPAS39-207ENST00000555854 ANTXR1Q9H6X2 564 aa11.42□□□□□ -0.58
VIPAS39-207ENST00000555854 ZFYVE28Q9HCC9 887 aa11.42□□□□□ -0.58
VIPAS39-207ENST00000555854 AATFQ9NY61 560 aaKnown RBP eCLIP11.42□□□□□ -0.58
VIPAS39-207ENST00000555854 PTPN22Q9Y2R2 807 aa11.42□□□□□ -0.58
VIPAS39-207ENST00000555854 PDE4DIPQ5VU43 2346 aa11.42□□□□□ -0.58
VIPAS39-207ENST00000555854 FLT1P17948 1338 aa11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 A0A0G2JLL6 359 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 GSTO1P78417 241 aa11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 SHROOM1Q2M3G4 852 aaPredicted RBP11.41□□□□□ -0.58
VIPAS39-207ENST00000555854 CCDC158Q5M9N0 1113 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms