RNA–Protein interactions for RNA: ENST00000555816.5

ATXN3-233, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 760 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-233ENST00000555816 CCDC18Q5T9S5 1454 aa7.82□□□□□ -1.16
ATXN3-233ENST00000555816 PLEKHH2Q8IVE3 1493 aa7.82□□□□□ -1.16
ATXN3-233ENST00000555816 KIDINS220Q9ULH0 1771 aa7.82□□□□□ -1.16
ATXN3-233ENST00000555816 WDR64B1ANS9 1081 aa7.82□□□□□ -1.16
ATXN3-233ENST00000555816 KIF3BO15066 747 aa7.82□□□□□ -1.16
ATXN3-233ENST00000555816 FZD6O60353 706 aa7.82□□□□□ -1.16
ATXN3-233ENST00000555816 LCE3BQ5TA77 95 aa7.82□□□□□ -1.16
ATXN3-233ENST00000555816 KRTAP1-3Q8IUG1 177 aa7.82□□□□□ -1.16
ATXN3-233ENST00000555816 SAMD9LQ8IVG5 1584 aa7.82□□□□□ -1.16
ATXN3-233ENST00000555816 ASAP3Q8TDY4 903 aa7.82□□□□□ -1.16
ATXN3-233ENST00000555816 METTL22Q9BUU2 404 aaPredicted RBP7.82□□□□□ -1.16
ATXN3-233ENST00000555816 EGFL7Q9UHF1 273 aa7.82□□□□□ -1.16
ATXN3-233ENST00000555816 LEMD3Q9Y2U8 911 aa7.82□□□□□ -1.16
ATXN3-233ENST00000555816 DHX29Q7Z478 1369 aaKnown RBP7.82□□□□□ -1.16
ATXN3-233ENST00000555816 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.82□□□□□ -1.16
ATXN3-233ENST00000555816 USP11P51784 963 aa7.81□□□□□ -1.16
ATXN3-233ENST00000555816 PEAR1Q5VY43 1037 aaPredicted RBP7.81□□□□□ -1.16
ATXN3-233ENST00000555816 B4GALNT3Q6L9W6 998 aa7.81□□□□□ -1.16
ATXN3-233ENST00000555816 PAOXQ6QHF9 649 aa7.81□□□□□ -1.16
ATXN3-233ENST00000555816 DDX54Q8TDD1 881 aaKnown RBP7.81□□□□□ -1.16
ATXN3-233ENST00000555816 USP26Q9BXU7 913 aa7.81□□□□□ -1.16
ATXN3-233ENST00000555816 MROH2AA6NES4 1674 aa7.81□□□□□ -1.16
ATXN3-233ENST00000555816 CCNB3Q8WWL7 1395 aa7.81□□□□□ -1.16
ATXN3-233ENST00000555816 NPHP4O75161 1426 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-233ENST00000555816 MIA2Q96PC5 1412 aa7.8□□□□□ -1.16
ATXN3-233ENST00000555816 FAM95CA0A1B0GW59 222 aa7.8□□□□□ -1.16
ATXN3-233ENST00000555816 CYP11A1P05108 521 aa7.8□□□□□ -1.16
ATXN3-233ENST00000555816 TAL1P17542 331 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-233ENST00000555816 RXRBP28702 533 aa7.8□□□□□ -1.16
ATXN3-233ENST00000555816 SGO2Q562F6 1265 aa7.8□□□□□ -1.16
ATXN3-233ENST00000555816 HGSNATQ68CP4 663 aa7.8□□□□□ -1.16
ATXN3-233ENST00000555816 PHLDB3Q6NSJ2 640 aa7.8□□□□□ -1.16
ATXN3-233ENST00000555816 MFSD14AQ96MC6 490 aa7.8□□□□□ -1.16
ATXN3-233ENST00000555816 OSBPL1AQ9BXW6 950 aa7.8□□□□□ -1.16
ATXN3-233ENST00000555816 FOXD3Q9UJU5 478 aaPredicted RBP7.8□□□□□ -1.16
ATXN3-233ENST00000555816 CDC42BPBQ9Y5S2 1711 aa7.8□□□□□ -1.16
ATXN3-233ENST00000555816 ZNF644Q9H582 1327 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-233ENST00000555816 RTEL1-TNFRSF6BF6WH68 1400 aa7.79□□□□□ -1.16
ATXN3-233ENST00000555816 FOSL1P15407 271 aa7.79□□□□□ -1.16
ATXN3-233ENST00000555816 GSTM4Q03013 218 aa7.79□□□□□ -1.16
ATXN3-233ENST00000555816 SOX4Q06945 474 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-233ENST00000555816 MTMR3Q13615 1198 aa7.79□□□□□ -1.16
ATXN3-233ENST00000555816 CCNJLQ8IV13 435 aa7.79□□□□□ -1.16
ATXN3-233ENST00000555816 CCDC82Q8N4S0 544 aa7.79□□□□□ -1.16
ATXN3-233ENST00000555816 EZH1Q92800 747 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-233ENST00000555816 CLEC4MQ9H2X3 399 aaPredicted RBP7.79□□□□□ -1.16
ATXN3-233ENST00000555816 ATP7AQ04656 1500 aa7.78□□□□□ -1.16
ATXN3-233ENST00000555816 PREX2Q70Z35 1606 aa7.78□□□□□ -1.16
ATXN3-233ENST00000555816 A0A096LPE4 126 aa7.78□□□□□ -1.16
ATXN3-233ENST00000555816 A0A1W2PPZ6 126 aa7.78□□□□□ -1.16
ATXN3-233ENST00000555816 GALNT12Q8IXK2 581 aa7.78□□□□□ -1.16
ATXN3-233ENST00000555816 MED14O60244 1454 aa7.78□□□□□ -1.16
ATXN3-233ENST00000555816 ITSN2Q9NZM3 1697 aa7.78□□□□□ -1.16
ATXN3-233ENST00000555816 DNMT1P26358 1616 aaKnown RBP7.78□□□□□ -1.16
ATXN3-233ENST00000555816 MYO3AQ8NEV4 1616 aa7.78□□□□□ -1.16
ATXN3-233ENST00000555816 SYCP2Q9BX26 1530 aa7.78□□□□□ -1.16
ATXN3-233ENST00000555816 PLXNC1O60486 1568 aa7.77□□□□□ -1.17
ATXN3-233ENST00000555816 ADAMTS4O75173 837 aa7.77□□□□□ -1.17
ATXN3-233ENST00000555816 NFKBIBQ15653 356 aa7.77□□□□□ -1.17
ATXN3-233ENST00000555816 C2CD4AQ8NCU7 369 aaPredicted RBP7.77□□□□□ -1.17
ATXN3-233ENST00000555816 NRSN2Q9GZP1 204 aa7.77□□□□□ -1.17
ATXN3-233ENST00000555816 USTQ9Y2C2 406 aa7.77□□□□□ -1.17
ATXN3-233ENST00000555816 FAM135AQ9P2D6 1515 aa7.77□□□□□ -1.17
ATXN3-233ENST00000555816 SYNGAP1Q96PV0 1343 aa7.77□□□□□ -1.17
ATXN3-233ENST00000555816 ZNF142P52746 1687 aaPredicted RBP7.76□□□□□ -1.17
ATXN3-233ENST00000555816 CLTCQ00610 1675 aaKnown RBP7.76□□□□□ -1.17
ATXN3-233ENST00000555816 PZPP20742 1482 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 NLRP1Q9C000 1473 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 BTBD11A6QL63 1104 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 ABL1P00519 1130 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 PRNPP04156 253 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 F13BP05160 661 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 TSPY4P0CV99 314 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 TSPY10P0CW01 314 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 CYP27A1Q02318 531 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 PCDH1Q08174 1060 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 TXNDC2Q86VQ3 553 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 KRTAP19-1Q8IUB9 90 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 CITED4Q96RK1 184 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 CCDC87Q9NVE4 849 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 ANGEL1Q9UNK9 670 aaKnown RBP7.76□□□□□ -1.17
ATXN3-233ENST00000555816 LRRC7Q96NW7 1537 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 VWDEQ8N2E2 1590 aa7.76□□□□□ -1.17
ATXN3-233ENST00000555816 MBD5Q9P267 1494 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 SUPT6HQ7KZ85 1726 aaKnown RBP7.75□□□□□ -1.17
ATXN3-233ENST00000555816 MTUS2Q5JR59 1369 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 A0A1W2PP55 124 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 ICMTO60725 284 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 DLGAP3O95886 979 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 DRD2P14416 443 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 YBX3P16989 372 aaKnown RBP eCLIP7.75□□□□□ -1.17
ATXN3-233ENST00000555816 PDE3BQ13370 1112 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 MAP7Q14244 749 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 MSMPQ1L6U9 139 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 KIAA0319Q5VV43 1072 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 FBLIM1Q8WUP2 373 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 FBXL18Q96ME1 805 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 ARID3AQ99856 593 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 LIN7BQ9HAP6 207 aa7.75□□□□□ -1.17
ATXN3-233ENST00000555816 LATS2Q9NRM7 1088 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms