RNA–Protein interactions for RNA: ENST00000555627.1

SIX1-204, Transcript of SIX homeobox 1, humanhuman

TSL 5

Gene SIX1, Length 461 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-204ENST00000555627 PPIP5K2O43314 1243 aa11.4□□□□□ -0.58
SIX1-204ENST00000555627 GNAT2P19087 354 aa11.4□□□□□ -0.58
SIX1-204ENST00000555627 ANTXR2P58335 489 aa11.4□□□□□ -0.58
SIX1-204ENST00000555627 RHBDL3P58872 404 aa11.4□□□□□ -0.58
SIX1-204ENST00000555627 CUL4AQ13619 759 aa11.4□□□□□ -0.58
SIX1-204ENST00000555627 KRT32Q14532 448 aa11.4□□□□□ -0.58
SIX1-204ENST00000555627 GRIPAP1Q4V328 841 aa11.4□□□□□ -0.58
SIX1-204ENST00000555627 CHADLQ6NUI6 762 aa11.4□□□□□ -0.58
SIX1-204ENST00000555627 PODNQ7Z5L7 613 aa11.4□□□□□ -0.58
SIX1-204ENST00000555627 FAM163AQ96GL9 167 aaPredicted RBP11.4□□□□□ -0.58
SIX1-204ENST00000555627 ZNF277Q9NRM2 450 aaPredicted RBP11.4□□□□□ -0.58
SIX1-204ENST00000555627 SUGT1Q9Y2Z0 365 aa11.4□□□□□ -0.58
SIX1-204ENST00000555627 SLC4A4Q9Y6R1 1079 aa11.4□□□□□ -0.58
SIX1-204ENST00000555627 GPR75-ASB3A0A0A6YYF3 556 aa11.39□□□□□ -0.59
SIX1-204ENST00000555627 BTDP43251 543 aa11.39□□□□□ -0.59
SIX1-204ENST00000555627 PPP4CP60510 307 aa11.39□□□□□ -0.59
SIX1-204ENST00000555627 RASSF7Q02833 373 aa11.39□□□□□ -0.59
SIX1-204ENST00000555627 IMMTQ16891 758 aaKnown RBP11.39□□□□□ -0.59
SIX1-204ENST00000555627 DALRD3Q5D0E6 543 aaKnown RBP11.39□□□□□ -0.59
SIX1-204ENST00000555627 SOGA3Q5TF21 947 aa11.39□□□□□ -0.59
SIX1-204ENST00000555627 BLOC1S2Q6QNY1 142 aa11.39□□□□□ -0.59
SIX1-204ENST00000555627 RTKN2Q8IZC4 609 aa11.39□□□□□ -0.59
SIX1-204ENST00000555627 SH3RF3Q8TEJ3 882 aaPredicted RBP11.39□□□□□ -0.59
SIX1-204ENST00000555627 TMX3Q96JJ7 454 aa11.39□□□□□ -0.59
SIX1-204ENST00000555627 AGXT2Q9BYV1 514 aa11.39□□□□□ -0.59
SIX1-204ENST00000555627 NAPBQ9H115 298 aa11.39□□□□□ -0.59
SIX1-204ENST00000555627 ALDH8A1Q9H2A2 487 aaPredicted RBP11.39□□□□□ -0.59
SIX1-204ENST00000555627 DCP1AQ9NPI6 582 aaPredicted RBP11.39□□□□□ -0.59
SIX1-204ENST00000555627 CTNNA3Q9UI47 895 aa11.39□□□□□ -0.59
SIX1-204ENST00000555627 CYP2D7A0A087X1C5 515 aa11.38□□□□□ -0.59
SIX1-204ENST00000555627 POTECB2RU33 542 aa11.38□□□□□ -0.59
SIX1-204ENST00000555627 GSTO1P78417 241 aa11.38□□□□□ -0.59
SIX1-204ENST00000555627 EXOSC10Q01780 885 aaKnown RBP11.38□□□□□ -0.59
SIX1-204ENST00000555627 STRIP1Q5VSL9 837 aa11.38□□□□□ -0.59
SIX1-204ENST00000555627 GIMAP6Q6P9H5 292 aa11.38□□□□□ -0.59
SIX1-204ENST00000555627 NOL8Q76FK4 1167 aaKnown RBP11.38□□□□□ -0.59
SIX1-204ENST00000555627 IL27Q8NEV9 243 aa11.38□□□□□ -0.59
SIX1-204ENST00000555627 STAG1Q8WVM7 1258 aa11.38□□□□□ -0.59
SIX1-204ENST00000555627 NEK1Q96PY6 1258 aa11.38□□□□□ -0.59
SIX1-204ENST00000555627 TMX4Q9H1E5 349 aaPredicted RBP11.38□□□□□ -0.59
SIX1-204ENST00000555627 ANAPC4Q9UJX5 808 aa11.38□□□□□ -0.59
SIX1-204ENST00000555627 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.38□□□□□ -0.59
SIX1-204ENST00000555627 CYP46A1Q9Y6A2 500 aa11.38□□□□□ -0.59
SIX1-204ENST00000555627 COL2A1P02458 1487 aaPredicted RBP11.38□□□□□ -0.59
SIX1-204ENST00000555627 WDR19Q8NEZ3 1342 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 PASKQ96RG2 1323 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 PITPNM2Q9BZ72 1349 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 TMEM88BA6NKF7 163 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 CYP2D6P10635 497 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 PSMA5P28066 241 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 IARSP41252 1262 aaKnown RBP11.37□□□□□ -0.59
SIX1-204ENST00000555627 TDO2P48775 406 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 MCM2P49736 904 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 CTDSPL2Q05D32 466 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 DGKZQ13574 1117 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 FBXW7Q969H0 707 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 GMLQ99445 158 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 CRNKL1Q9BZJ0 848 aaKnown RBP11.37□□□□□ -0.59
SIX1-204ENST00000555627 TAOK3Q9H2K8 898 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 PDRG1Q9NUG6 133 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 TSKSQ9UJT2 592 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 PCDHAC2Q9Y5I4 1007 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 OTOFQ9HC10 1997 aa11.37□□□□□ -0.59
SIX1-204ENST00000555627 FLT1P17948 1338 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 USP17L3A6NCW0 530 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 USP17L4A6NCW7 530 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 POTEIP0CG38 1075 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 POTEJP0CG39 1038 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 FXR1P51114 621 aaKnown RBP eCLIP11.36□□□□□ -0.59
SIX1-204ENST00000555627 PPARAQ07869 468 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 CTR9Q6PD62 1173 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 CYB5R4Q7L1T6 521 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 USP17L1Q7RTZ2 530 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 LARP6Q9BRS8 491 aaKnown RBP11.36□□□□□ -0.59
SIX1-204ENST00000555627 BEGAINQ9BUH8 593 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 LRRC2Q9BYS8 371 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 VPS33BQ9H267 617 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 SLKQ9H2G2 1235 aaPredicted RBP11.36□□□□□ -0.59
SIX1-204ENST00000555627 GPHNQ9NQX3 736 aaPredicted RBP11.36□□□□□ -0.59
SIX1-204ENST00000555627 TPCN1Q9ULQ1 816 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 TTF2Q9UNY4 1162 aaKnown RBP11.36□□□□□ -0.59
SIX1-204ENST00000555627 NID2Q14112 1375 aa11.36□□□□□ -0.59
SIX1-204ENST00000555627 WDR33Q9C0J8 1336 aaKnown RBP11.35□□□□□ -0.59
SIX1-204ENST00000555627 THSD7BQ9C0I4 1608 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 RASSF10A6NK89 507 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 F8W031 263 aaPredicted RBP11.35□□□□□ -0.59
SIX1-204ENST00000555627 PSMD14O00487 310 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 ZNF213O14771 459 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 APPP05067 770 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 LDHCP07864 332 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 FGRP09769 529 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 SCNN1DP51172 638 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 ME3Q16798 604 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 SBK1Q52WX2 424 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 AKNAD1Q5T1N1 836 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 DHX32Q7L7V1 743 aaKnown RBP11.35□□□□□ -0.59
SIX1-204ENST00000555627 LARGE2Q8N3Y3 721 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 FBXL16Q8N461 479 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 SPRYD3Q8NCJ5 442 aa11.35□□□□□ -0.59
SIX1-204ENST00000555627 DDX4Q9NQI0 724 aaKnown RBP11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms