RNA–Protein interactions for RNA: ENST00000555578.1

LINC00638-201, long intergenic non-protein coding RNA 638, humanhuman

BASIC

Gene LINC00638, Length 2,518 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00638-201ENST00000555578 CHD4Q14839 1912 aa16.35■□□□□ 0.21
LINC00638-201ENST00000555578 TNS1Q9HBL0 1735 aaKnown RBP16.35■□□□□ 0.21
LINC00638-201ENST00000555578 UBE2Q2LH0YL09 131 aa16.35■□□□□ 0.21
LINC00638-201ENST00000555578 CDC27P30260 824 aa16.35■□□□□ 0.21
LINC00638-201ENST00000555578 CHRNA5P30532 468 aa16.35■□□□□ 0.21
LINC00638-201ENST00000555578 APOA5Q6Q788 366 aa16.35■□□□□ 0.21
LINC00638-201ENST00000555578 FLAD1Q8NFF5 587 aa16.35■□□□□ 0.21
LINC00638-201ENST00000555578 WDR66Q8TBY9 1149 aa16.35■□□□□ 0.21
LINC00638-201ENST00000555578 LLPHQ9BRT6 129 aaKnown RBP16.35■□□□□ 0.21
LINC00638-201ENST00000555578 DCP1AQ9NPI6 582 aaPredicted RBP16.35■□□□□ 0.21
LINC00638-201ENST00000555578 SRCAPQ6ZRS2 3230 aa16.35■□□□□ 0.21
LINC00638-201ENST00000555578 SALL1Q9NSC2 1324 aa16.35■□□□□ 0.21
LINC00638-201ENST00000555578 CPLX1O14810 134 aa16.35■□□□□ 0.21
LINC00638-201ENST00000555578 DOK7Q18PE1 504 aa16.35■□□□□ 0.21
LINC00638-201ENST00000555578 ATP6V0A2Q9Y487 856 aa16.35■□□□□ 0.21
LINC00638-201ENST00000555578 ATP6V1DQ9Y5K8 247 aa16.35■□□□□ 0.21
LINC00638-201ENST00000555578 PDS5AQ29RF7 1337 aaKnown RBP16.34■□□□□ 0.21
LINC00638-201ENST00000555578 CEBPZQ03701 1054 aaKnown RBP16.34■□□□□ 0.21
LINC00638-201ENST00000555578 ZSCAN23Q3MJ62 389 aa16.34■□□□□ 0.21
LINC00638-201ENST00000555578 SP8Q8IXZ3 490 aa16.34■□□□□ 0.21
LINC00638-201ENST00000555578 SH3RF3Q8TEJ3 882 aaPredicted RBP16.34■□□□□ 0.21
LINC00638-201ENST00000555578 PHKBQ93100 1093 aa16.34■□□□□ 0.21
LINC00638-201ENST00000555578 AIFM3Q96NN9 605 aa16.34■□□□□ 0.21
LINC00638-201ENST00000555578 MXD3Q9BW11 206 aa16.34■□□□□ 0.21
LINC00638-201ENST00000555578 USP17L8P0C7I0 530 aa16.34■□□□□ 0.21
LINC00638-201ENST00000555578 NPR1P16066 1061 aa16.34■□□□□ 0.21
LINC00638-201ENST00000555578 METAP2P50579 478 aaKnown RBP eCLIP16.34■□□□□ 0.21
LINC00638-201ENST00000555578 GTF2IP78347 998 aa16.34■□□□□ 0.21
LINC00638-201ENST00000555578 MFSD14BQ5SR56 506 aa16.34■□□□□ 0.21
LINC00638-201ENST00000555578 CMTR1Q8N1G2 835 aaKnown RBP16.34■□□□□ 0.21
LINC00638-201ENST00000555578 CCDC82Q8N4S0 544 aa16.34■□□□□ 0.21
LINC00638-201ENST00000555578 KRT23Q9C075 422 aa16.34■□□□□ 0.21
LINC00638-201ENST00000555578 MYH2Q9UKX2 1941 aa16.33■□□□□ 0.21
LINC00638-201ENST00000555578 F8W031 263 aaPredicted RBP16.33■□□□□ 0.2
LINC00638-201ENST00000555578 RANBP6O60518 1105 aaKnown RBP16.33■□□□□ 0.2
LINC00638-201ENST00000555578 NASPP49321 788 aaPredicted RBP16.33■□□□□ 0.2
LINC00638-201ENST00000555578 SPTY2D1Q68D10 685 aaPredicted RBP16.33■□□□□ 0.2
LINC00638-201ENST00000555578 CRNKL1Q9BZJ0 848 aaKnown RBP16.33■□□□□ 0.2
LINC00638-201ENST00000555578 FTOQ9C0B1 505 aaKnown RBP eCLIP16.33■□□□□ 0.2
LINC00638-201ENST00000555578 CNNM2Q9H8M5 875 aa16.33■□□□□ 0.2
LINC00638-201ENST00000555578 PDE6BP35913 854 aa16.33■□□□□ 0.2
LINC00638-201ENST00000555578 HMGN5P82970 282 aaKnown RBP16.33■□□□□ 0.2
LINC00638-201ENST00000555578 TMEM87BQ96K49 555 aa16.33■□□□□ 0.2
LINC00638-201ENST00000555578 ORC3Q9UBD5 711 aaPredicted RBP16.33■□□□□ 0.2
LINC00638-201ENST00000555578 CCDC88AQ3V6T2 1871 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 IL1R1P14778 569 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 C15orf52Q6ZUT6 534 aaKnown RBP16.32■□□□□ 0.2
LINC00638-201ENST00000555578 TTC6Q86TZ1 520 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 C2CD5Q86YS7 1000 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 MPNDQ8N594 471 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 MCM9Q9NXL9 1143 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 WDR19Q8NEZ3 1342 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 ZBTB43O43298 467 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 NMT2O60551 498 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 RESTQ13127 1097 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 FAM47AQ5JRC9 791 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 TGFBRAP1Q8WUH2 860 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 KCNQ5Q9NR82 932 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 FAM217BQ9NTX9 383 aaPredicted RBP16.32■□□□□ 0.2
LINC00638-201ENST00000555578 SLC12A7Q9Y666 1083 aa16.32■□□□□ 0.2
LINC00638-201ENST00000555578 SYCE3A1L190 88 aa16.31■□□□□ 0.2
LINC00638-201ENST00000555578 CCDC69A6NI79 296 aa16.31■□□□□ 0.2
LINC00638-201ENST00000555578 CCDC173Q0VFZ6 552 aa16.31■□□□□ 0.2
LINC00638-201ENST00000555578 DPP8Q6V1X1 898 aaPredicted RBP16.31■□□□□ 0.2
LINC00638-201ENST00000555578 MASTLQ96GX5 879 aa16.31■□□□□ 0.2
LINC00638-201ENST00000555578 STK32BQ9NY57 414 aa16.31■□□□□ 0.2
LINC00638-201ENST00000555578 HMGB2P26583 209 aaKnown RBP16.3■□□□□ 0.2
LINC00638-201ENST00000555578 USP5P45974 858 aa16.3■□□□□ 0.2
LINC00638-201ENST00000555578 ZNF445P59923 1031 aa16.3■□□□□ 0.2
LINC00638-201ENST00000555578 WTAPQ15007 396 aa16.3■□□□□ 0.2
LINC00638-201ENST00000555578 NUP133Q8WUM0 1156 aa16.3■□□□□ 0.2
LINC00638-201ENST00000555578 CHMP4CQ96CF2 233 aa16.3■□□□□ 0.2
LINC00638-201ENST00000555578 ZC3H12CQ9C0D7 883 aaKnown RBP16.3■□□□□ 0.2
LINC00638-201ENST00000555578 RNF41Q9H4P4 317 aaPredicted RBP16.3■□□□□ 0.2
LINC00638-201ENST00000555578 SAP30BPQ9UHR5 308 aaKnown RBP16.3■□□□□ 0.2
LINC00638-201ENST00000555578 GOLGA8AA7E2F4 631 aa16.3■□□□□ 0.2
LINC00638-201ENST00000555578 ALDH1B1P30837 517 aa16.3■□□□□ 0.2
LINC00638-201ENST00000555578 KRT85P78386 507 aa16.3■□□□□ 0.2
LINC00638-201ENST00000555578 DYNLL2Q96FJ2 89 aa16.3■□□□□ 0.2
LINC00638-201ENST00000555578 PPP1R9BQ96SB3 815 aa16.3■□□□□ 0.2
LINC00638-201ENST00000555578 UBAC1Q9BSL1 405 aa16.3■□□□□ 0.2
LINC00638-201ENST00000555578 ANAPC4Q9UJX5 808 aa16.3■□□□□ 0.2
LINC00638-201ENST00000555578 COL11A2P13942 1736 aaPredicted RBP16.3■□□□□ 0.2
LINC00638-201ENST00000555578 DHX16O60231 1041 aaKnown RBP16.29■□□□□ 0.2
LINC00638-201ENST00000555578 SGMS1Q86VZ5 419 aa16.29■□□□□ 0.2
LINC00638-201ENST00000555578 MAPKAPK5Q8IW41 473 aa16.29■□□□□ 0.2
LINC00638-201ENST00000555578 ESR2Q92731 530 aa16.29■□□□□ 0.2
LINC00638-201ENST00000555578 TNKSO95271 1327 aa16.29■□□□□ 0.2
LINC00638-201ENST00000555578 MBD3O95983 291 aa16.29■□□□□ 0.2
LINC00638-201ENST00000555578 LIFRP42702 1097 aa16.29■□□□□ 0.2
LINC00638-201ENST00000555578 TMEM87AQ8NBN3 555 aa16.29■□□□□ 0.2
LINC00638-201ENST00000555578 DBNDD1Q9H9R9 158 aa16.29■□□□□ 0.2
LINC00638-201ENST00000555578 ERICH2A1L162 156 aa16.28■□□□□ 0.2
LINC00638-201ENST00000555578 POLR3DP05423 398 aaPredicted RBP16.28■□□□□ 0.2
LINC00638-201ENST00000555578 BTDP43251 543 aa16.28■□□□□ 0.2
LINC00638-201ENST00000555578 ANP32BQ92688 251 aaKnown RBP16.28■□□□□ 0.2
LINC00638-201ENST00000555578 C8orf76Q96K31 380 aa16.28■□□□□ 0.2
LINC00638-201ENST00000555578 RTFDC1Q9BY42 306 aaPredicted RBP16.28■□□□□ 0.2
LINC00638-201ENST00000555578 ATP8A2Q9NTI2 1148 aa16.28■□□□□ 0.2
LINC00638-201ENST00000555578 NRXN2Q9P2S2 1712 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms