RNA–Protein interactions for RNA: ENST00000555451.1

XRCC3-213, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 3

Gene XRCC3, Length 409 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-213ENST00000555451 FBXL16Q8N461 479 aa13.17□□□□□ -0.3
XRCC3-213ENST00000555451 STAG1Q8WVM7 1258 aa13.17□□□□□ -0.3
XRCC3-213ENST00000555451 INTS4Q96HW7 963 aaKnown RBP13.17□□□□□ -0.3
XRCC3-213ENST00000555451 KRT23Q9C075 422 aa13.17□□□□□ -0.3
XRCC3-213ENST00000555451 DAGLAQ9Y4D2 1042 aa13.17□□□□□ -0.3
XRCC3-213ENST00000555451 DDX60LQ5H9U9 1706 aaKnown RBP13.16□□□□□ -0.3
XRCC3-213ENST00000555451 COL4A5P29400 1685 aa13.16□□□□□ -0.3
XRCC3-213ENST00000555451 YDJCA8MPS7 323 aa13.16□□□□□ -0.3
XRCC3-213ENST00000555451 USP5P45974 858 aa13.16□□□□□ -0.3
XRCC3-213ENST00000555451 NT5C2P49902 561 aa13.16□□□□□ -0.3
XRCC3-213ENST00000555451 FGD1P98174 961 aa13.16□□□□□ -0.3
XRCC3-213ENST00000555451 TOB2Q14106 344 aaPredicted RBP13.16□□□□□ -0.3
XRCC3-213ENST00000555451 MFSD6Q6ZSS7 791 aa13.16□□□□□ -0.3
XRCC3-213ENST00000555451 AMOTL1Q8IY63 956 aa13.16□□□□□ -0.3
XRCC3-213ENST00000555451 SPRYD3Q8NCJ5 442 aa13.16□□□□□ -0.3
XRCC3-213ENST00000555451 SH3RF3Q8TEJ3 882 aaPredicted RBP13.16□□□□□ -0.3
XRCC3-213ENST00000555451 JDP2Q8WYK2 163 aa13.16□□□□□ -0.3
XRCC3-213ENST00000555451 TEKT1Q969V4 418 aa13.16□□□□□ -0.3
XRCC3-213ENST00000555451 AGXT2Q9BYV1 514 aa13.16□□□□□ -0.3
XRCC3-213ENST00000555451 SLKQ9H2G2 1235 aaPredicted RBP13.16□□□□□ -0.3
XRCC3-213ENST00000555451 CWC22Q9HCG8 908 aaKnown RBP13.16□□□□□ -0.3
XRCC3-213ENST00000555451 CIZ1Q9ULV3 898 aaPredicted RBP13.16□□□□□ -0.3
XRCC3-213ENST00000555451 MINDY4BA8MYZ0 360 aa13.15□□□□□ -0.3
XRCC3-213ENST00000555451 F8W031 263 aaPredicted RBP13.15□□□□□ -0.3
XRCC3-213ENST00000555451 KIF3CO14782 793 aa13.15□□□□□ -0.3
XRCC3-213ENST00000555451 SLC3A2P08195 630 aaKnown RBP13.15□□□□□ -0.3
XRCC3-213ENST00000555451 RHBDL3P58872 404 aa13.15□□□□□ -0.3
XRCC3-213ENST00000555451 CTDSPL2Q05D32 466 aa13.15□□□□□ -0.3
XRCC3-213ENST00000555451 CTR9Q6PD62 1173 aa13.15□□□□□ -0.3
XRCC3-213ENST00000555451 Q6ZUG5 572 aa13.15□□□□□ -0.3
XRCC3-213ENST00000555451 TEX11Q8IYF3 940 aa13.15□□□□□ -0.3
XRCC3-213ENST00000555451 MTA3Q9BTC8 594 aa13.15□□□□□ -0.3
XRCC3-213ENST00000555451 NMRK2Q9NPI5 230 aa13.15□□□□□ -0.3
XRCC3-213ENST00000555451 KCNQ5Q9NR82 932 aa13.15□□□□□ -0.3
XRCC3-213ENST00000555451 CHMP5Q9NZZ3 219 aa13.15□□□□□ -0.3
XRCC3-213ENST00000555451 MKRN1Q9UHC7 482 aaKnown RBP13.15□□□□□ -0.3
XRCC3-213ENST00000555451 ZNRF3Q9ULT6 936 aa13.15□□□□□ -0.3
XRCC3-213ENST00000555451 NEDD4P46934 1319 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 ECM29Q5VYK3 1845 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 USP17L12C9JPN9 530 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 USP17L21D6R901 530 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 PRC1O43663 620 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 DDIT3P35638 169 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 CRKP46108 304 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 COL9A3Q14050 684 aaPredicted RBP13.14□□□□□ -0.31
XRCC3-213ENST00000555451 TMEM87BQ96K49 555 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 TCEANC2Q96MN5 208 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 ZDHHC15Q96MV8 337 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 MXD3Q9BW11 206 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 MCM9Q9NXL9 1143 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 SERPINA10Q9UK55 444 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 ROBO3Q96MS0 1386 aa13.14□□□□□ -0.31
XRCC3-213ENST00000555451 ZNF541Q9H0D2 1346 aa13.13□□□□□ -0.31
XRCC3-213ENST00000555451 ADAMTSL1Q8N6G6 1762 aa13.13□□□□□ -0.31
XRCC3-213ENST00000555451 POTECB2RU33 542 aa13.13□□□□□ -0.31
XRCC3-213ENST00000555451 DDNO94850 711 aaPredicted RBP13.13□□□□□ -0.31
XRCC3-213ENST00000555451 VIL1P09327 827 aaKnown RBP13.13□□□□□ -0.31
XRCC3-213ENST00000555451 FGRP09769 529 aa13.13□□□□□ -0.31
XRCC3-213ENST00000555451 SCNN1DP51172 638 aa13.13□□□□□ -0.31
XRCC3-213ENST00000555451 ANTXR2P58335 489 aa13.13□□□□□ -0.31
XRCC3-213ENST00000555451 RSBN1LQ6PCB5 846 aaPredicted RBP13.13□□□□□ -0.31
XRCC3-213ENST00000555451 KIAA0825Q8IV33 1275 aa13.13□□□□□ -0.31
XRCC3-213ENST00000555451 TGFBRAP1Q8WUH2 860 aa13.13□□□□□ -0.31
XRCC3-213ENST00000555451 BRF1Q92994 677 aa13.13□□□□□ -0.31
XRCC3-213ENST00000555451 CHMP4CQ96CF2 233 aa13.13□□□□□ -0.31
XRCC3-213ENST00000555451 L3MBTL3Q96JM7 780 aaPredicted RBP13.13□□□□□ -0.31
XRCC3-213ENST00000555451 RRAGCQ9HB90 399 aa13.13□□□□□ -0.31
XRCC3-213ENST00000555451 TPCN1Q9ULQ1 816 aa13.13□□□□□ -0.31
XRCC3-213ENST00000555451 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.13□□□□□ -0.31
XRCC3-213ENST00000555451 WDR90Q96KV7 1748 aa13.13□□□□□ -0.31
XRCC3-213ENST00000555451 MYH1P12882 1939 aa13.12□□□□□ -0.31
XRCC3-213ENST00000555451 B4E1Z4 1266 aa13.12□□□□□ -0.31
XRCC3-213ENST00000555451 VEGFAP15692 232 aaPredicted RBP13.12□□□□□ -0.31
XRCC3-213ENST00000555451 EIF6P56537 245 aaKnown RBP13.12□□□□□ -0.31
XRCC3-213ENST00000555451 EVCP57679 992 aa13.12□□□□□ -0.31
XRCC3-213ENST00000555451 ME3Q16798 604 aa13.12□□□□□ -0.31
XRCC3-213ENST00000555451 C12orf60Q5U649 245 aa13.12□□□□□ -0.31
XRCC3-213ENST00000555451 GPC2Q8N158 579 aa13.12□□□□□ -0.31
XRCC3-213ENST00000555451 AGBL3Q8NEM8 1001 aa13.12□□□□□ -0.31
XRCC3-213ENST00000555451 ESR2Q92731 530 aa13.12□□□□□ -0.31
XRCC3-213ENST00000555451 TOMM22Q9NS69 142 aa13.12□□□□□ -0.31
XRCC3-213ENST00000555451 FOXD4L1Q9NU39 408 aa13.12□□□□□ -0.31
XRCC3-213ENST00000555451 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
XRCC3-213ENST00000555451 FLT1P17948 1338 aa13.12□□□□□ -0.31
XRCC3-213ENST00000555451 PSMD14O00487 310 aa13.11□□□□□ -0.31
XRCC3-213ENST00000555451 ORC4O43929 436 aa13.11□□□□□ -0.31
XRCC3-213ENST00000555451 KDM4AO75164 1064 aa13.11□□□□□ -0.31
XRCC3-213ENST00000555451 LARGE1O95461 756 aa13.11□□□□□ -0.31
XRCC3-213ENST00000555451 PDE4BQ07343 736 aa13.11□□□□□ -0.31
XRCC3-213ENST00000555451 SART3Q15020 963 aaKnown RBP13.11□□□□□ -0.31
XRCC3-213ENST00000555451 CIAPIN1Q6FI81 312 aa13.11□□□□□ -0.31
XRCC3-213ENST00000555451 APOBEC3HQ6NTF7 200 aaKnown RBP13.11□□□□□ -0.31
XRCC3-213ENST00000555451 CHST3Q7LGC8 479 aa13.11□□□□□ -0.31
XRCC3-213ENST00000555451 MAPKAPK5Q8IW41 473 aa13.11□□□□□ -0.31
XRCC3-213ENST00000555451 LRRC2Q9BYS8 371 aa13.11□□□□□ -0.31
XRCC3-213ENST00000555451 USP40Q9NVE5 1235 aa13.11□□□□□ -0.31
XRCC3-213ENST00000555451 ANGEL1Q9UNK9 670 aaKnown RBP13.11□□□□□ -0.31
XRCC3-213ENST00000555451 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.11□□□□□ -0.31
XRCC3-213ENST00000555451 TACC3Q9Y6A5 838 aa13.11□□□□□ -0.31
XRCC3-213ENST00000555451 CYP2D7A0A087X1C5 515 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms