RNA–Protein interactions for RNA: ENST00000555317.5

SRP54-206, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 644 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-206ENST00000555317 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.68□□□□□ -0.062e-6■■■□□ 14.8
SRP54-206ENST00000555317 ANTXR1Q9H6X2 564 aa14.68□□□□□ -0.06
SRP54-206ENST00000555317 RHBDL3P58872 404 aa14.67□□□□□ -0.06
SRP54-206ENST00000555317 MAP3K9P80192 1104 aa14.67□□□□□ -0.06
SRP54-206ENST00000555317 SREBF2Q12772 1141 aa14.67□□□□□ -0.06
SRP54-206ENST00000555317 SLC9C2Q5TAH2 1124 aa14.67□□□□□ -0.06
SRP54-206ENST00000555317 ANKRD45Q5TZF3 282 aa14.67□□□□□ -0.06
SRP54-206ENST00000555317 MIGA2Q7L4E1 593 aa14.67□□□□□ -0.06
SRP54-206ENST00000555317 SH3RF3Q8TEJ3 882 aaPredicted RBP14.67□□□□□ -0.06
SRP54-206ENST00000555317 CLMNQ96JQ2 1002 aa14.67□□□□□ -0.06
SRP54-206ENST00000555317 HAUS7Q99871 368 aa14.67□□□□□ -0.06
SRP54-206ENST00000555317 ELP3Q9H9T3 547 aa14.67□□□□□ -0.06
SRP54-206ENST00000555317 RFX7Q2KHR2 1363 aa14.67□□□□□ -0.06
SRP54-206ENST00000555317 MYH7P12883 1935 aa14.66□□□□□ -0.06
SRP54-206ENST00000555317 ERC2O15083 957 aa14.66□□□□□ -0.06
SRP54-206ENST00000555317 FOXN1O15353 648 aa14.66□□□□□ -0.06
SRP54-206ENST00000555317 NPM3O75607 178 aaKnown RBP14.66□□□□□ -0.06
SRP54-206ENST00000555317 ZBTB48P10074 688 aaPredicted RBP14.66□□□□□ -0.06
SRP54-206ENST00000555317 PPP4CP60510 307 aa14.66□□□□□ -0.06
SRP54-206ENST00000555317 SPRYD7Q5W111 196 aa14.66□□□□□ -0.06
SRP54-206ENST00000555317 ADGRA1Q86SQ6 560 aa14.66□□□□□ -0.06
SRP54-206ENST00000555317 MIGA1Q8NAN2 632 aa14.66□□□□□ -0.06
SRP54-206ENST00000555317 WNK4Q96J92 1243 aa14.66□□□□□ -0.06
SRP54-206ENST00000555317 ZIC5Q96T25 663 aa14.66□□□□□ -0.06
SRP54-206ENST00000555317 DDX4Q9NQI0 724 aaKnown RBP14.66□□□□□ -0.06
SRP54-206ENST00000555317 PDE6AP16499 860 aa14.65□□□□□ -0.06
SRP54-206ENST00000555317 USP5P45974 858 aa14.65□□□□□ -0.06
SRP54-206ENST00000555317 IRX6P78412 446 aaPredicted RBP14.65□□□□□ -0.06
SRP54-206ENST00000555317 VGLL4Q14135 290 aa14.65□□□□□ -0.06
SRP54-206ENST00000555317 ZSCAN25Q6NSZ9 544 aa14.65□□□□□ -0.06
SRP54-206ENST00000555317 ZFPM1Q8IX07 1006 aa14.65□□□□□ -0.06
SRP54-206ENST00000555317 DDX55Q8NHQ9 600 aaKnown RBP eCLIP14.65□□□□□ -0.06
SRP54-206ENST00000555317 TGFBRAP1Q8WUH2 860 aa14.65□□□□□ -0.06
SRP54-206ENST00000555317 TRIM34Q9BYJ4 488 aa14.65□□□□□ -0.06
SRP54-206ENST00000555317 OSBPL5Q9H0X9 879 aaPredicted RBP14.65□□□□□ -0.06
SRP54-206ENST00000555317 CDK5RAP2Q96SN8 1893 aa14.65□□□□□ -0.06
SRP54-206ENST00000555317 TTC41PQ6P2S7 1318 aa14.65□□□□□ -0.06
SRP54-206ENST00000555317 FOCADQ5VW36 1801 aa14.64□□□□□ -0.07
SRP54-206ENST00000555317 MAGEB6P1A0A0J9YX57 407 aa14.64□□□□□ -0.07
SRP54-206ENST00000555317 MANSC4A6NHS7 340 aaPredicted RBP14.64□□□□□ -0.07
SRP54-206ENST00000555317 MX1P20591 662 aa14.64□□□□□ -0.07
SRP54-206ENST00000555317 TSHZ3Q63HK5 1081 aa14.64□□□□□ -0.07
SRP54-206ENST00000555317 MAPKAPK5Q8IW41 473 aa14.64□□□□□ -0.07
SRP54-206ENST00000555317 OPTNQ96CV9 577 aa14.64□□□□□ -0.07
SRP54-206ENST00000555317 EDC3Q96F86 508 aaKnown RBP14.64□□□□□ -0.07
SRP54-206ENST00000555317 ZNF532Q9HCE3 1301 aa14.64□□□□□ -0.07
SRP54-206ENST00000555317 COL2A1P02458 1487 aaPredicted RBP14.63□□□□□ -0.07
SRP54-206ENST00000555317 ATRNL1Q5VV63 1379 aa14.63□□□□□ -0.07
SRP54-206ENST00000555317 DDTLA6NHG4 134 aaPredicted RBP14.63□□□□□ -0.07
SRP54-206ENST00000555317 DYNLL1P63167 89 aaKnown RBP14.63□□□□□ -0.07
SRP54-206ENST00000555317 LRRFIP1Q32MZ4 808 aaKnown RBP14.63□□□□□ -0.07
SRP54-206ENST00000555317 PPP1R3FQ6ZSY5 799 aaPredicted RBP14.63□□□□□ -0.07
SRP54-206ENST00000555317 ZKSCAN4Q969J2 545 aaPredicted RBP14.63□□□□□ -0.07
SRP54-206ENST00000555317 OTUD5Q96G74 571 aa14.63□□□□□ -0.07
SRP54-206ENST00000555317 DHX36Q9H2U1 1008 aaKnown RBP14.63□□□□□ -0.07
SRP54-206ENST00000555317 SAGE1Q9NXZ1 904 aa14.63□□□□□ -0.07
SRP54-206ENST00000555317 FLT1P17948 1338 aa14.63□□□□□ -0.07
SRP54-206ENST00000555317 MYH1P12882 1939 aa14.62□□□□□ -0.07
SRP54-206ENST00000555317 GLRX3O76003 335 aaKnown RBP14.62□□□□□ -0.07
SRP54-206ENST00000555317 HLA-DOAP06340 250 aa14.62□□□□□ -0.07
SRP54-206ENST00000555317 LBX1P52954 281 aa14.62□□□□□ -0.07
SRP54-206ENST00000555317 INHBEP58166 350 aa14.62□□□□□ -0.07
SRP54-206ENST00000555317 OTUD7BQ6GQQ9 843 aa14.62□□□□□ -0.07
SRP54-206ENST00000555317 ERO1BQ86YB8 467 aa14.62□□□□□ -0.07
SRP54-206ENST00000555317 CRACR2BQ8N4Y2 399 aaPredicted RBP14.62□□□□□ -0.07
SRP54-206ENST00000555317 CRNKL1Q9BZJ0 848 aaKnown RBP14.62□□□□□ -0.07
SRP54-206ENST00000555317 XPO5Q9HAV4 1204 aaKnown RBP eCLIP14.62□□□□□ -0.07
SRP54-206ENST00000555317 PICK1Q9NRD5 415 aa14.62□□□□□ -0.07
SRP54-206ENST00000555317 TSKSQ9UJT2 592 aa14.62□□□□□ -0.07
SRP54-206ENST00000555317 SPDYE5A6NIY4 337 aa14.61□□□□□ -0.07
SRP54-206ENST00000555317 TRPA1O75762 1119 aa14.61□□□□□ -0.07
SRP54-206ENST00000555317 HSPA8P11142 646 aaKnown RBP14.61□□□□□ -0.07
SRP54-206ENST00000555317 INPP5BP32019 993 aa14.61□□□□□ -0.07
SRP54-206ENST00000555317 GTF2A2P52657 109 aa14.61□□□□□ -0.07
SRP54-206ENST00000555317 B4GALNT3Q6L9W6 998 aa14.61□□□□□ -0.07
SRP54-206ENST00000555317 SH3BP5LQ7L8J4 393 aa14.61□□□□□ -0.07
SRP54-206ENST00000555317 PI4KBQ9UBF8 816 aa14.61□□□□□ -0.07
SRP54-206ENST00000555317 SAP30BPQ9UHR5 308 aaKnown RBP14.61□□□□□ -0.07
SRP54-206ENST00000555317 SNCAIPQ9Y6H5 919 aa14.61□□□□□ -0.07
SRP54-206ENST00000555317 ALDH1A1P00352 501 aa14.6□□□□□ -0.07
SRP54-206ENST00000555317 ADD2P35612 726 aa14.6□□□□□ -0.07
SRP54-206ENST00000555317 TM4SF4P48230 202 aa14.6□□□□□ -0.07
SRP54-206ENST00000555317 OTUD7AQ8TE49 926 aaPredicted RBP14.6□□□□□ -0.07
SRP54-206ENST00000555317 DDRGK1Q96HY6 314 aa14.6□□□□□ -0.07
SRP54-206ENST00000555317 LNPKQ9C0E8 428 aa14.6□□□□□ -0.07
SRP54-206ENST00000555317 PRDM10Q9NQV6 1147 aa14.6□□□□□ -0.07
SRP54-206ENST00000555317 RNF186Q9NXI6 227 aa14.6□□□□□ -0.07
SRP54-206ENST00000555317 HERC5Q9UII4 1024 aaKnown RBP14.6□□□□□ -0.07
SRP54-206ENST00000555317 ZNF112Q9UJU3 913 aa14.6□□□□□ -0.07
SRP54-206ENST00000555317 NAV1Q8NEY1 1877 aa14.6□□□□□ -0.07
SRP54-206ENST00000555317 DOCK1Q14185 1865 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 TCRBV5S4A2TA0A5A2 114 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 TBC1D12O60347 775 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 CTNND1O60716 968 aaKnown RBP14.59□□□□□ -0.07
SRP54-206ENST00000555317 MBD4O95243 580 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 GJA5P36382 358 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 PPATQ06203 517 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 PPIL2Q13356 520 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 SNAPC2Q13487 334 aa14.59□□□□□ -0.07
SRP54-206ENST00000555317 UBE3CQ15386 1083 aa14.59□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms