RNA–Protein interactions for RNA: ENST00000555254.5

PSEN1-212, Transcript of presenilin 1, humanhuman

TSL 3

Gene PSEN1, Length 754 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-212ENST00000555254 KCNB2Q92953 911 aa20.98■□□□□ 0.95
PSEN1-212ENST00000555254 ZBED3Q96IU2 234 aaPredicted RBP20.98■□□□□ 0.95
PSEN1-212ENST00000555254 STRBPQ96SI9 672 aaKnown RBP20.98■□□□□ 0.95
PSEN1-212ENST00000555254 NACAP1Q9BZK3 213 aa20.98■□□□□ 0.95
PSEN1-212ENST00000555254 CREBZFQ9NS37 354 aa20.98■□□□□ 0.95
PSEN1-212ENST00000555254 SERPINA10Q9UK55 444 aa20.98■□□□□ 0.95
PSEN1-212ENST00000555254 SNX14Q9Y5W7 946 aa20.98■□□□□ 0.95
PSEN1-212ENST00000555254 MYO1BO43795 1136 aa20.97■□□□□ 0.95
PSEN1-212ENST00000555254 CST9Q5W186 159 aa20.97■□□□□ 0.95
PSEN1-212ENST00000555254 MTMR14Q8NCE2 650 aa20.97■□□□□ 0.95
PSEN1-212ENST00000555254 SNX21Q969T3 373 aa20.97■□□□□ 0.95
PSEN1-212ENST00000555254 TEKT1Q969V4 418 aa20.97■□□□□ 0.95
PSEN1-212ENST00000555254 NSUN4Q96CB9 384 aaKnown RBP20.97■□□□□ 0.95
PSEN1-212ENST00000555254 IL17RAQ96F46 866 aa20.97■□□□□ 0.95
PSEN1-212ENST00000555254 PRDM10Q9NQV6 1147 aa20.97■□□□□ 0.95
PSEN1-212ENST00000555254 PALD1Q9ULE6 856 aa20.97■□□□□ 0.95
PSEN1-212ENST00000555254 ABT1Q9ULW3 272 aaKnown RBP20.97■□□□□ 0.95
PSEN1-212ENST00000555254 SUGT1Q9Y2Z0 365 aa20.97■□□□□ 0.95
PSEN1-212ENST00000555254 PATL2C9JE40 543 aaKnown RBP20.96■□□□□ 0.95
PSEN1-212ENST00000555254 PRDX5P30044 214 aa20.96■□□□□ 0.95
PSEN1-212ENST00000555254 PRAMEF18Q5VWM3 479 aa20.96■□□□□ 0.95
PSEN1-212ENST00000555254 VEZTQ9HBM0 779 aa20.96■□□□□ 0.95
PSEN1-212ENST00000555254 ZNF646O15015 1829 aaPredicted RBP20.95■□□□□ 0.94
PSEN1-212ENST00000555254 NEK4P51957 841 aa20.95■□□□□ 0.94
PSEN1-212ENST00000555254 IMMTQ16891 758 aaKnown RBP20.95■□□□□ 0.94
PSEN1-212ENST00000555254 VPS53Q5VIR6 699 aa20.95■□□□□ 0.94
PSEN1-212ENST00000555254 MIGA1Q8NAN2 632 aa20.95■□□□□ 0.94
PSEN1-212ENST00000555254 CDCA5Q96FF9 252 aa20.95■□□□□ 0.94
PSEN1-212ENST00000555254 TDRD3Q9H7E2 651 aaKnown RBP20.95■□□□□ 0.94
PSEN1-212ENST00000555254 ARMT1Q9H993 441 aa20.95■□□□□ 0.94
PSEN1-212ENST00000555254 PITPNM2Q9BZ72 1349 aa20.95■□□□□ 0.94
PSEN1-212ENST00000555254 RPAP1Q9BWH6 1393 aaPredicted RBP20.95■□□□□ 0.94
PSEN1-212ENST00000555254 BAG3O95817 575 aa20.94■□□□□ 0.94
PSEN1-212ENST00000555254 HDLBPQ00341 1268 aaKnown RBP20.94■□□□□ 0.94
PSEN1-212ENST00000555254 DIXDC1Q155Q3 683 aa20.94■□□□□ 0.94
PSEN1-212ENST00000555254 ALX1Q15699 326 aa20.94■□□□□ 0.94
PSEN1-212ENST00000555254 TSGA10IPQ3SY00 556 aa20.94■□□□□ 0.94
PSEN1-212ENST00000555254 CERS3Q8IU89 383 aa20.94■□□□□ 0.94
PSEN1-212ENST00000555254 APOBEC3FQ8IUX4 373 aaKnown RBP20.94■□□□□ 0.94
PSEN1-212ENST00000555254 RASEFQ8IZ41 740 aa20.94■□□□□ 0.94
PSEN1-212ENST00000555254 ABHD8Q96I13 439 aa20.94■□□□□ 0.94
PSEN1-212ENST00000555254 TM6SF1Q9BZW5 370 aa20.94■□□□□ 0.94
PSEN1-212ENST00000555254 SLC4A4Q9Y6R1 1079 aa20.94■□□□□ 0.94
PSEN1-212ENST00000555254 MCM2P49736 904 aa20.93■□□□□ 0.94
PSEN1-212ENST00000555254 JAKMIP1Q96N16 626 aaKnown RBP20.93■□□□□ 0.94
PSEN1-212ENST00000555254 CRNKL1Q9BZJ0 848 aaKnown RBP20.93■□□□□ 0.94
PSEN1-212ENST00000555254 ZNF70Q9UC06 446 aaPredicted RBP20.93■□□□□ 0.94
PSEN1-212ENST00000555254 MKRN1Q9UHC7 482 aaKnown RBP20.93■□□□□ 0.94
PSEN1-212ENST00000555254 CYP46A1Q9Y6A2 500 aa20.93■□□□□ 0.94
PSEN1-212ENST00000555254 PDE4DIPQ5VU43 2346 aa20.92■□□□□ 0.94
PSEN1-212ENST00000555254 MLLT1Q03111 559 aaPredicted RBP20.92■□□□□ 0.94
PSEN1-212ENST00000555254 LCORLQ8N3X6 602 aa20.92■□□□□ 0.94
PSEN1-212ENST00000555254 MRIQ9BWK5 157 aa20.92■□□□□ 0.94
PSEN1-212ENST00000555254 TBC1D2Q9BYX2 928 aa20.92■□□□□ 0.94
PSEN1-212ENST00000555254 NAPBQ9H115 298 aa20.92■□□□□ 0.94
PSEN1-212ENST00000555254 ZNF213O14771 459 aa20.91■□□□□ 0.94
PSEN1-212ENST00000555254 FGAP02671 866 aa20.91■□□□□ 0.94
PSEN1-212ENST00000555254 MYH7P12883 1935 aa20.91■□□□□ 0.94
PSEN1-212ENST00000555254 TDO2P48775 406 aa20.91■□□□□ 0.94
PSEN1-212ENST00000555254 HHIPL2Q6UWX4 724 aa20.91■□□□□ 0.94
PSEN1-212ENST00000555254 PAXIP1Q6ZW49 1069 aaPredicted RBP20.91■□□□□ 0.94
PSEN1-212ENST00000555254 ZDHHC15Q96MV8 337 aa20.91■□□□□ 0.94
PSEN1-212ENST00000555254 DEFB129Q9H1M3 183 aa20.91■□□□□ 0.94
PSEN1-212ENST00000555254 TCP10L2B9ZVM9 353 aa20.9■□□□□ 0.94
PSEN1-212ENST00000555254 PLCG2P16885 1265 aa20.9■□□□□ 0.94
PSEN1-212ENST00000555254 CASTP20810 708 aaKnown RBP20.9■□□□□ 0.94
PSEN1-212ENST00000555254 SPDYE2Q495Y8 402 aa20.9■□□□□ 0.94
PSEN1-212ENST00000555254 APOBEC3HQ6NTF7 200 aaKnown RBP20.9■□□□□ 0.94
PSEN1-212ENST00000555254 BLOC1S2Q6QNY1 142 aa20.9■□□□□ 0.94
PSEN1-212ENST00000555254 IFNL3Q8IZI9 196 aa20.9■□□□□ 0.94
PSEN1-212ENST00000555254 C2orf69Q8N8R5 385 aa20.9■□□□□ 0.94
PSEN1-212ENST00000555254 DOCK2Q92608 1830 aa20.9■□□□□ 0.94
PSEN1-212ENST00000555254 HMGB1P09429 215 aaKnown RBP20.89■□□□□ 0.93
PSEN1-212ENST00000555254 CACNB3P54284 484 aa20.89■□□□□ 0.93
PSEN1-212ENST00000555254 DYNLL1P63167 89 aaKnown RBP20.89■□□□□ 0.93
PSEN1-212ENST00000555254 GRM1Q13255 1194 aa20.89■□□□□ 0.93
PSEN1-212ENST00000555254 DEFB115Q30KQ5 88 aa20.89■□□□□ 0.93
PSEN1-212ENST00000555254 ADGRA1Q86SQ6 560 aa20.89■□□□□ 0.93
PSEN1-212ENST00000555254 UPF3BQ9BZI7 483 aaKnown RBP20.89■□□□□ 0.93
PSEN1-212ENST00000555254 GBA2Q9HCG7 927 aaPredicted RBP20.89■□□□□ 0.93
PSEN1-212ENST00000555254 ZSWIM6Q9HCJ5 1215 aa20.89■□□□□ 0.93
PSEN1-212ENST00000555254 AATFQ9NY61 560 aaKnown RBP eCLIP20.89■□□□□ 0.93
PSEN1-212ENST00000555254 DAGLAQ9Y4D2 1042 aa20.89■□□□□ 0.93
PSEN1-212ENST00000555254 TNRC18O15417 2968 aaPredicted RBP20.88■□□□□ 0.93
PSEN1-212ENST00000555254 MYH13Q9UKX3 1938 aa20.88■□□□□ 0.93
PSEN1-212ENST00000555254 MROH7-TTC4A0A0A0MT08 1334 aa20.88■□□□□ 0.93
PSEN1-212ENST00000555254 ZMYM6O95789 1325 aa20.88■□□□□ 0.93
PSEN1-212ENST00000555254 GSG1L2A8MUP6 293 aa20.88■□□□□ 0.93
PSEN1-212ENST00000555254 CYP21A2P08686 494 aa20.88■□□□□ 0.93
PSEN1-212ENST00000555254 TTLL12Q14166 644 aaPredicted RBP20.88■□□□□ 0.93
PSEN1-212ENST00000555254 RASA3Q14644 834 aa20.88■□□□□ 0.93
PSEN1-212ENST00000555254 GIMAP6Q6P9H5 292 aa20.88■□□□□ 0.93
PSEN1-212ENST00000555254 ZNF384Q8TF68 577 aa20.88■□□□□ 0.93
PSEN1-212ENST00000555254 FAM163AQ96GL9 167 aaPredicted RBP20.88■□□□□ 0.93
PSEN1-212ENST00000555254 NEK1Q96PY6 1258 aa20.88■□□□□ 0.93
PSEN1-212ENST00000555254 RIOK1Q9BRS2 568 aaKnown RBP20.88■□□□□ 0.93
PSEN1-212ENST00000555254 PDRG1Q9NUG6 133 aa20.88■□□□□ 0.93
PSEN1-212ENST00000555254 TMOD2Q9NZR1 351 aa20.88■□□□□ 0.93
PSEN1-212ENST00000555254 TLL2Q9Y6L7 1015 aa20.88■□□□□ 0.93
PSEN1-212ENST00000555254 K7ELQ4 463 aaPredicted RBP20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms