RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	CIAPIN1	Q6FI81	312 aa		6.26	□□□□□ -1.41
ATXN3-231	ENST00000554994	PIGB	Q92521	554 aa		6.26	□□□□□ -1.41
ATXN3-231	ENST00000554994	SRP68	Q9UHB9	627 aa	Known RBP	6.26	□□□□□ -1.41
ATXN3-231	ENST00000554994	RTCB	Q9Y3I0	505 aa	Known RBP	6.26	□□□□□ -1.41
ATXN3-231	ENST00000554994	FAM208A	Q9UK61	1670 aa	Known RBP	6.26	□□□□□ -1.41
ATXN3-231	ENST00000554994	KRTAP4-8	A0A0G2JLE6	195 aa		6.25	□□□□□ -1.41
ATXN3-231	ENST00000554994	IQCA1L	A6NCM1	817 aa		6.25	□□□□□ -1.41
ATXN3-231	ENST00000554994	CA12	O43570	354 aa		6.25	□□□□□ -1.41
ATXN3-231	ENST00000554994	ALAS2	P22557	587 aa		6.25	□□□□□ -1.41
ATXN3-231	ENST00000554994	HMGB2	P26583	209 aa	Known RBP	6.25	□□□□□ -1.41
ATXN3-231	ENST00000554994	RFC4	P35249	363 aa		6.25	□□□□□ -1.41
ATXN3-231	ENST00000554994	TSGA10IP	Q3SY00	556 aa		6.25	□□□□□ -1.41
ATXN3-231	ENST00000554994	ZNF468	Q5VIY5	522 aa	Predicted RBP	6.25	□□□□□ -1.41
ATXN3-231	ENST00000554994	PCMTD1	Q96MG8	357 aa	Predicted RBP	6.25	□□□□□ -1.41
ATXN3-231	ENST00000554994	AVEN	Q9NQS1	362 aa	Predicted RBP	6.25	□□□□□ -1.41
ATXN3-231	ENST00000554994	DDX21	Q9NR30	783 aa	Known RBP eCLIP	6.25	□□□□□ -1.41
ATXN3-231	ENST00000554994	CEP126	Q9P2H0	1117 aa		6.25	□□□□□ -1.41
ATXN3-231	ENST00000554994	ELOA3C	A0A087WX78	387 aa	Predicted RBP	6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	ELOA3D	A6NLF2	546 aa	Predicted RBP	6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	TRAF5	O00463	557 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	TAT	P17735	454 aa	Predicted RBP	6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	GRIK4	Q16099	956 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	ELOA3B	Q3SY89	546 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	OXLD1	Q5BKU9	147 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	NBPF6	Q5VWK0	638 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	ELOA3	Q8NG57	546 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	C1orf216	Q8TAB5	229 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	RAPGEF4	Q8WZA2	1011 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	NBPF4	Q96M43	638 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	ZIC5	Q96T25	663 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	NIFK	Q9BYG3	293 aa	Known RBP	6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	POLK	Q9UBT6	870 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	ASAP1	Q9ULH1	1129 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	DOLK	Q9UPQ8	538 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	ITGB4	P16144	1822 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	TRIOBP	Q9H2D6	2365 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	SMG6	Q86US8	1419 aa	Known RBP	6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994	ZNF541	Q9H0D2	1346 aa		6.24	□□□□□ -1.41
ATXN3-231	ENST00000554994		M0R082	166 aa		6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	C21orf2	O43822	256 aa		6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	EPHX2	P34913	555 aa		6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	MAP2K2	P36507	400 aa		6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	MTHFS	P49914	203 aa		6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	USP4	Q13107	963 aa		6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	TRIM28	Q13263	835 aa	Known RBP	6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	SYT9	Q86SS6	491 aa		6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	TTLL6	Q8N841	843 aa		6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	ZNF417	Q8TAU3	575 aa		6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	ZNF587	Q96SQ5	575 aa	Predicted RBP	6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	MARK1	Q9P0L2	795 aa		6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	HACL1	Q9UJ83	578 aa		6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	ADAMTSL1	Q8N6G6	1762 aa		6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	RNF123	Q5XPI4	1314 aa		6.23	□□□□□ -1.41
ATXN3-231	ENST00000554994	POLRMT	O00411	1230 aa	Known RBP	6.22	□□□□□ -1.41
ATXN3-231	ENST00000554994	U2SURP	O15042	1029 aa	Known RBP	6.22	□□□□□ -1.41
ATXN3-231	ENST00000554994	CYP27B1	O15528	508 aa		6.22	□□□□□ -1.41
ATXN3-231	ENST00000554994	BRPF1	P55201	1214 aa	Predicted RBP	6.22	□□□□□ -1.41
ATXN3-231	ENST00000554994	LRP8	Q14114	963 aa		6.22	□□□□□ -1.41
ATXN3-231	ENST00000554994	CST9	Q5W186	159 aa		6.22	□□□□□ -1.41
ATXN3-231	ENST00000554994	BICDL1	Q6ZP65	573 aa		6.22	□□□□□ -1.41
ATXN3-231	ENST00000554994	C8orf86	Q6ZUL3	223 aa		6.22	□□□□□ -1.41
ATXN3-231	ENST00000554994	C2CD5	Q86YS7	1000 aa		6.22	□□□□□ -1.41
ATXN3-231	ENST00000554994	NACC1	Q96RE7	527 aa		6.22	□□□□□ -1.41
ATXN3-231	ENST00000554994	SERTAD1	Q9UHV2	236 aa		6.22	□□□□□ -1.41
ATXN3-231	ENST00000554994	PCDH11X	Q9BZA7	1347 aa		6.22	□□□□□ -1.41
ATXN3-231	ENST00000554994	PCDH11Y	Q9BZA8	1340 aa		6.22	□□□□□ -1.41
ATXN3-231	ENST00000554994	FLT4	P35916	1363 aa		6.21	□□□□□ -1.41
ATXN3-231	ENST00000554994	CARMIL3	Q8ND23	1372 aa		6.21	□□□□□ -1.41
ATXN3-231	ENST00000554994	SCN4A	P35499	1836 aa		6.21	□□□□□ -1.42
ATXN3-231	ENST00000554994	GDF10	P55107	478 aa		6.21	□□□□□ -1.42
ATXN3-231	ENST00000554994	EIF4A2	Q14240	407 aa	Known RBP	6.21	□□□□□ -1.42
ATXN3-231	ENST00000554994	CFAP53	Q96M91	514 aa		6.21	□□□□□ -1.42
ATXN3-231	ENST00000554994	TAOK3	Q9H2K8	898 aa		6.21	□□□□□ -1.42
ATXN3-231	ENST00000554994	NDUFB9	Q9Y6M9	179 aa		6.21	□□□□□ -1.42
ATXN3-231	ENST00000554994		A0A0C4DFX4	3053 aa		6.21	□□□□□ -1.42
ATXN3-231	ENST00000554994	DICER1	Q9UPY3	1922 aa	Known RBP	6.21	□□□□□ -1.42
ATXN3-231	ENST00000554994	INSR	P06213	1382 aa		6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	HYAL3	O43820	417 aa	Predicted RBP	6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	DIAPH1	O60610	1272 aa	Known RBP	6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	HMOX1	P09601	288 aa		6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	FAM157B	P0CG42	384 aa		6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	SULT6B1	Q6IMI4	303 aa		6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	CTU1	Q7Z7A3	348 aa	Known RBP	6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	KRTAP19-1	Q8IUB9	90 aa		6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	ZNF622	Q969S3	477 aa	Known RBP eCLIP	6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	SLC4A9	Q96Q91	983 aa		6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	GOLGA2P5	Q9HBQ8	144 aa		6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	SPG7	Q9UQ90	795 aa		6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	DLEC1	Q9Y238	1755 aa		6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	USP42	Q9H9J4	1324 aa	Known RBP	6.2	□□□□□ -1.42
ATXN3-231	ENST00000554994	SZT2	Q5T011	3432 aa		6.19	□□□□□ -1.42
ATXN3-231	ENST00000554994	DLG5	Q8TDM6	1919 aa		6.19	□□□□□ -1.42
ATXN3-231	ENST00000554994	RPS6KA4	O75676	772 aa		6.19	□□□□□ -1.42
ATXN3-231	ENST00000554994	INHA	P05111	366 aa		6.19	□□□□□ -1.42
ATXN3-231	ENST00000554994	SLFNL1	Q499Z3	407 aa		6.19	□□□□□ -1.42
ATXN3-231	ENST00000554994	PLEKHO1	Q53GL0	409 aa	Predicted RBP	6.19	□□□□□ -1.42
ATXN3-231	ENST00000554994	PNMA8A	Q86V59	439 aa	Predicted RBP	6.19	□□□□□ -1.42
ATXN3-231	ENST00000554994	ZNF408	Q9H9D4	720 aa		6.19	□□□□□ -1.42
ATXN3-231	ENST00000554994	TMOD3	Q9NYL9	352 aa		6.19	□□□□□ -1.42
ATXN3-231	ENST00000554994	RTL1	A6NKG5	1358 aa		6.18	□□□□□ -1.42

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