RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 FBXO24O75426 580 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 PAGE1O75459 146 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 FOSL1P15407 271 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 MAPK8P45983 427 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 MFAP1P55081 439 aaKnown RBP2.65□□□□□ -1.98
PRPF39-208ENST00000554785 PLCB3Q01970 1234 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 RPS26P11Q5JNZ5 115 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-208ENST00000554785 RASIP1Q5U651 963 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 PAOXQ6QHF9 649 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 BHLHE22Q8NFJ8 381 aaPredicted RBP2.65□□□□□ -1.98
PRPF39-208ENST00000554785 FANCD2OSQ96PS1 177 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 OSBPL1AQ9BXW6 950 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 DISC1Q9NRI5 854 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 RNF19AQ9NV58 838 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 NLRP2Q9NX02 1062 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 CRIM1Q9NZV1 1036 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 AKAP2Q9Y2D5 859 aa2.65□□□□□ -1.98
PRPF39-208ENST00000554785 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-208ENST00000554785 DBX1A6NMT0 343 aa2.65□□□□□ -1.99
PRPF39-208ENST00000554785 ENC1O14682 589 aa2.65□□□□□ -1.99
PRPF39-208ENST00000554785 GSTP1P09211 210 aaKnown RBP2.65□□□□□ -1.99
PRPF39-208ENST00000554785 CDK5R2Q13319 367 aa2.65□□□□□ -1.99
PRPF39-208ENST00000554785 AP3B2Q13367 1082 aa2.65□□□□□ -1.99
PRPF39-208ENST00000554785 CCDC27Q2M243 656 aa2.65□□□□□ -1.99
PRPF39-208ENST00000554785 GRIN3AQ8TCU5 1115 aa2.65□□□□□ -1.99
PRPF39-208ENST00000554785 TMEM39AQ9NV64 488 aa2.65□□□□□ -1.99
PRPF39-208ENST00000554785 BSDC1Q9NW68 430 aaPredicted RBP2.65□□□□□ -1.99
PRPF39-208ENST00000554785 CCDC39Q9UFE4 941 aa2.65□□□□□ -1.99
PRPF39-208ENST00000554785 ZC3H7BQ9UGR2 993 aaKnown RBP2.65□□□□□ -1.99
PRPF39-208ENST00000554785 TRAK1Q9UPV9 953 aa2.65□□□□□ -1.99
PRPF39-208ENST00000554785 CYP26A1O43174 497 aa2.64□□□□□ -1.99
PRPF39-208ENST00000554785 NEFMP07197 916 aa2.64□□□□□ -1.99
PRPF39-208ENST00000554785 HCLS1P14317 486 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-208ENST00000554785 FMR1Q06787 632 aaKnown RBP eCLIP2.64□□□□□ -1.99
PRPF39-208ENST00000554785 ZNF252P-AS1Q0IIN9 211 aa2.64□□□□□ -1.99
PRPF39-208ENST00000554785 TTLL4Q14679 1199 aa2.64□□□□□ -1.99
PRPF39-208ENST00000554785 PKN1Q16512 942 aa2.64□□□□□ -1.99
PRPF39-208ENST00000554785 ABI1Q8IZP0 508 aa2.64□□□□□ -1.99
PRPF39-208ENST00000554785 KCNB2Q92953 911 aa2.64□□□□□ -1.99
PRPF39-208ENST00000554785 YIPF2Q9BWQ6 316 aa2.64□□□□□ -1.99
PRPF39-208ENST00000554785 LRRC4CQ9HCJ2 640 aa2.64□□□□□ -1.99
PRPF39-208ENST00000554785 GPN3Q9UHW5 284 aaPredicted RBP2.64□□□□□ -1.99
PRPF39-208ENST00000554785 LEFTY1O75610 366 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 BMP6P22004 513 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 NTF4P34130 210 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 KIF4BQ2VIQ3 1234 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 MAP1SQ66K74 1059 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-208ENST00000554785 TPTE2Q6XPS3 522 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 UBE3DQ7Z6J8 389 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 WFDC3Q8IUB2 231 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 SULF2Q8IWU5 870 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 DDX54Q8TDD1 881 aaKnown RBP2.63□□□□□ -1.99
PRPF39-208ENST00000554785 GPBAR1Q8TDU6 330 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 ASB16Q96NS5 453 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 NECAB3Q96P71 396 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-208ENST00000554785 CACNA2D2Q9NY47 1150 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 P4HBP07237 508 aaKnown RBP2.63□□□□□ -1.99
PRPF39-208ENST00000554785 ARNTP27540 789 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 CYP27A1Q02318 531 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 ID3Q02535 119 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 PTPN11Q06124 597 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-208ENST00000554785 MAP7Q14244 749 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 ZC3H12AQ5D1E8 599 aaKnown RBP2.63□□□□□ -1.99
PRPF39-208ENST00000554785 OGFOD3Q6PK18 319 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 SPRED2Q7Z698 418 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 SMYD4Q8IYR2 804 aaPredicted RBP2.63□□□□□ -1.99
PRPF39-208ENST00000554785 STK11IPQ8N1F8 1099 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 FAM181AQ8N9Y4 354 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 CSADQ9Y600 493 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 SYNGAP1Q96PV0 1343 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 CCDC180Q9P1Z9 1646 aa2.63□□□□□ -1.99
PRPF39-208ENST00000554785 B8ZZF3 427 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 FARP2O94887 1054 aaPredicted RBP2.62□□□□□ -1.99
PRPF39-208ENST00000554785 CD96P40200 585 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 SPOCD1Q6ZMY3 1216 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 ZNF574Q6ZN55 896 aaPredicted RBP2.62□□□□□ -1.99
PRPF39-208ENST00000554785 PLD6Q8N2A8 252 aaKnown RBP2.62□□□□□ -1.99
PRPF39-208ENST00000554785 RGS22Q8NE09 1264 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 ISL2Q96A47 359 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 ZFYVE1Q9HBF4 777 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 KRT82Q9NSB4 513 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 UNC13AQ9UPW8 1703 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 RNGTTO60942 597 aaKnown RBP2.62□□□□□ -1.99
PRPF39-208ENST00000554785 CELA3AP09093 270 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 SLFN14P0C7P3 912 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 FAM87AP0C7U9 286 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 XRCC5P13010 732 aaKnown RBP2.62□□□□□ -1.99
PRPF39-208ENST00000554785 NME2P22392 152 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 CDK8P49336 464 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 PPP2R3AQ06190 1150 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 RING1Q06587 406 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 BNIP3Q12983 259 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 PPM1JQ5JR12 505 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 HP1BP3Q5SSJ5 553 aaPredicted RBP2.62□□□□□ -1.99
PRPF39-208ENST00000554785 DUSP27Q5VZP5 1158 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 C12orf40Q86WS4 652 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 TP53INP2Q8IXH6 220 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 SLC38A3Q99624 504 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 CBX8Q9HC52 389 aa2.62□□□□□ -1.99
PRPF39-208ENST00000554785 PAK6Q9NQU5 681 aaPredicted RBP2.62□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms