RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 PNMA6EA0A0J9YXQ4 647 aa15.64■□□□□ 0.09
VTI1B-204ENST00000554659 PAK1Q13153 545 aa15.64■□□□□ 0.09
VTI1B-204ENST00000554659 PLIN2Q99541 437 aa15.64■□□□□ 0.09
VTI1B-204ENST00000554659 ZKSCAN3Q9BRR0 538 aa15.64■□□□□ 0.09
VTI1B-204ENST00000554659 SSX2IPQ9Y2D8 614 aa15.64■□□□□ 0.09
VTI1B-204ENST00000554659 KIAA0232Q92628 1395 aa15.64■□□□□ 0.09
VTI1B-204ENST00000554659 CCDC50Q8IVM0 306 aa15.64■□□□□ 0.09
VTI1B-204ENST00000554659 DIS3L2Q8IYB7 885 aaKnown RBP15.64■□□□□ 0.09
VTI1B-204ENST00000554659 POLR2DO15514 142 aaKnown RBP15.63■□□□□ 0.09
VTI1B-204ENST00000554659 PARP1P09874 1014 aaKnown RBP15.63■□□□□ 0.09
VTI1B-204ENST00000554659 PLCB3Q01970 1234 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 PDE4DQ08499 809 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 UBLCP1Q8WVY7 318 aaPredicted RBP15.63■□□□□ 0.09
VTI1B-204ENST00000554659 ANAPC4Q9UJX5 808 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 USP19O94966 1318 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 ZNF500O60304 480 aaPredicted RBP15.63■□□□□ 0.09
VTI1B-204ENST00000554659 TIMM10P62072 90 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 SETDB1Q15047 1291 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 PPP1R7Q15435 360 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 KCNK9Q9NPC2 374 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 DENND2AQ9ULE3 1009 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 TRAF5O00463 557 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 CLGNO14967 610 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 PPP2R5BQ15173 497 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 SEL1L2Q5TEA6 688 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 ABCC4O15439 1325 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 GCP02774 474 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 DCAF8L1A6NGE4 600 aa15.63■□□□□ 0.09
VTI1B-204ENST00000554659 PCDH11XQ9BZA7 1347 aa15.62■□□□□ 0.09
VTI1B-204ENST00000554659 PCDH11YQ9BZA8 1340 aa15.62■□□□□ 0.09
VTI1B-204ENST00000554659 LDHBP07195 334 aaKnown RBP15.62■□□□□ 0.09
VTI1B-204ENST00000554659 RAPGEF1Q13905 1077 aa15.62■□□□□ 0.09
VTI1B-204ENST00000554659 ATP5DP30049 168 aa15.62■□□□□ 0.09
VTI1B-204ENST00000554659 MAP7D1Q3KQU3 841 aa15.62■□□□□ 0.09
VTI1B-204ENST00000554659 LRRC45Q96CN5 670 aa15.62■□□□□ 0.09
VTI1B-204ENST00000554659 NFE2L3Q9Y4A8 694 aa15.62■□□□□ 0.09
VTI1B-204ENST00000554659 GPAA1O43292 621 aa15.62■□□□□ 0.09
VTI1B-204ENST00000554659 ATP2A2P16615 1042 aaKnown RBP15.62■□□□□ 0.09
VTI1B-204ENST00000554659 LETM2Q2VYF4 491 aa15.62■□□□□ 0.09
VTI1B-204ENST00000554659 ZNF790Q6PG37 636 aa15.62■□□□□ 0.09
VTI1B-204ENST00000554659 CCDC25Q86WR0 208 aa15.62■□□□□ 0.09
VTI1B-204ENST00000554659 CSGALNACT2Q8N6G5 542 aa15.62■□□□□ 0.09
VTI1B-204ENST00000554659 SECISBP2LQ93073 1101 aaKnown RBP15.62■□□□□ 0.09
VTI1B-204ENST00000554659 NOL3O60936 208 aaKnown RBP15.62■□□□□ 0.09
VTI1B-204ENST00000554659 PPFIBP2Q8ND30 876 aa15.62■□□□□ 0.09
VTI1B-204ENST00000554659 EPB41P11171 864 aaKnown RBP15.61■□□□□ 0.09
VTI1B-204ENST00000554659 PUM3Q15397 648 aaKnown RBP15.61■□□□□ 0.09
VTI1B-204ENST00000554659 NDC80O14777 642 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 LACTBP83111 547 aaPredicted RBP15.61■□□□□ 0.09
VTI1B-204ENST00000554659 POSTNQ15063 836 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 DCAF17Q5H9S7 520 aaPredicted RBP15.61■□□□□ 0.09
VTI1B-204ENST00000554659 TPTE2Q6XPS3 522 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 IFT20Q8IY31 132 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 ZNF622Q969S3 477 aaKnown RBP eCLIP15.61■□□□□ 0.099e-7■■□□□ 11.8
VTI1B-204ENST00000554659 GOLGA6CA6NDK9 693 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 GOLGA6DP0CG33 693 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 TTC38Q5R3I4 469 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 PLCD3Q8N3E9 789 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 XAGE2Q96GT9 111 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 NOX5Q96PH1 765 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 GOLGA6AQ9NYA3 693 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 MAP3K9P80192 1104 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 PIK3AP1Q6ZUJ8 805 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 POTEDQ86YR6 584 aa15.61■□□□□ 0.09
VTI1B-204ENST00000554659 F8W031 263 aaPredicted RBP15.6■□□□□ 0.09
VTI1B-204ENST00000554659 SWAP70Q9UH65 585 aa15.6■□□□□ 0.09
VTI1B-204ENST00000554659 NDUFAB1O14561 156 aa15.6■□□□□ 0.09
VTI1B-204ENST00000554659 KRT40Q6A162 431 aa15.6■□□□□ 0.09
VTI1B-204ENST00000554659 MSANTD4Q8NCY6 345 aa15.6■□□□□ 0.09
VTI1B-204ENST00000554659 DSCC1Q9BVC3 393 aa15.6■□□□□ 0.09
VTI1B-204ENST00000554659 HDAC9Q9UKV0 1011 aa15.6■□□□□ 0.09
VTI1B-204ENST00000554659 FRMD4BQ9Y2L6 1034 aa15.6■□□□□ 0.09
VTI1B-204ENST00000554659 TPD52P55327 224 aaPredicted RBP15.6■□□□□ 0.09
VTI1B-204ENST00000554659 CEP128Q6ZU80 1094 aa15.6■□□□□ 0.09
VTI1B-204ENST00000554659 NKIRAS1Q9NYS0 192 aa15.6■□□□□ 0.09
VTI1B-204ENST00000554659 PTPRTO14522 1441 aa15.6■□□□□ 0.09
VTI1B-204ENST00000554659 GSPT1P15170 499 aaKnown RBP15.6■□□□□ 0.09
VTI1B-204ENST00000554659 MRPL12P52815 198 aaKnown RBP15.6■□□□□ 0.09
VTI1B-204ENST00000554659 SUCLG2Q96I99 432 aa15.6■□□□□ 0.09
VTI1B-204ENST00000554659 A0A1B0GUA9 196 aa15.59■□□□□ 0.09
VTI1B-204ENST00000554659 MYCNP04198 464 aaPredicted RBP15.59■□□□□ 0.09
VTI1B-204ENST00000554659 OTUD7BQ6GQQ9 843 aa15.59■□□□□ 0.09
VTI1B-204ENST00000554659 ZNF526Q8TF50 670 aaPredicted RBP15.59■□□□□ 0.09
VTI1B-204ENST00000554659 SEC62Q99442 399 aaKnown RBP15.59■□□□□ 0.09
VTI1B-204ENST00000554659 ACTN4O43707 911 aaKnown RBP15.59■□□□□ 0.09
VTI1B-204ENST00000554659 ITGA6P23229 1130 aa15.59■□□□□ 0.09
VTI1B-204ENST00000554659 TTC6Q86TZ1 520 aa15.59■□□□□ 0.09
VTI1B-204ENST00000554659 V9GY48 417 aaPredicted RBP15.59■□□□□ 0.09
VTI1B-204ENST00000554659 JAK2O60674 1132 aa15.59■□□□□ 0.09
VTI1B-204ENST00000554659 ARMT1Q9H993 441 aa15.59■□□□□ 0.09
VTI1B-204ENST00000554659 ADAMTS12P58397 1594 aa15.59■□□□□ 0.09
VTI1B-204ENST00000554659 KRT9P35527 623 aa15.58■□□□□ 0.09
VTI1B-204ENST00000554659 ME3Q16798 604 aa15.58■□□□□ 0.09
VTI1B-204ENST00000554659 CROCCP2Q86T23 111 aa15.58■□□□□ 0.09
VTI1B-204ENST00000554659 KLHDC4Q8TBB5 520 aa15.58■□□□□ 0.09
VTI1B-204ENST00000554659 IFT74Q96LB3 600 aa15.58■□□□□ 0.09
VTI1B-204ENST00000554659 BCL2L12Q9HB09 334 aa15.58■□□□□ 0.09
VTI1B-204ENST00000554659 SBDSQ9Y3A5 250 aaKnown RBP eCLIP15.58■□□□□ 0.09
VTI1B-204ENST00000554659 TTLL12Q14166 644 aaPredicted RBP15.58■□□□□ 0.09
VTI1B-204ENST00000554659 ADALQ6DHV7 355 aa15.58■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms