RNA–Protein interactions for RNA: ENST00000554658.5

CIPC-203, Transcript of CLOCK interacting pacemaker, humanhuman

TSL 4

Gene CIPC, Length 584 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIPC-203ENST00000554658 HMX1Q9NP08 348 aaPredicted RBP17.45■□□□□ 0.38
CIPC-203ENST00000554658 PICK1Q9NRD5 415 aa17.45■□□□□ 0.38
CIPC-203ENST00000554658 LAMA2P24043 3122 aaKnown RBP17.44■□□□□ 0.38
CIPC-203ENST00000554658 GRM8O00222 908 aa17.44■□□□□ 0.38
CIPC-203ENST00000554658 FAM109BQ6ICB4 259 aaPredicted RBP17.44■□□□□ 0.38
CIPC-203ENST00000554658 SCYL3Q8IZE3 742 aa17.44■□□□□ 0.38
CIPC-203ENST00000554658 FAM161BQ96MY7 647 aa17.44■□□□□ 0.38
CIPC-203ENST00000554658 SPTBN5Q9NRC6 3674 aaKnown RBP17.43■□□□□ 0.38
CIPC-203ENST00000554658 NFIAQ12857 509 aa17.43■□□□□ 0.38
CIPC-203ENST00000554658 BEND3Q5T5X7 828 aa17.43■□□□□ 0.38
CIPC-203ENST00000554658 COL2A1P02458 1487 aaPredicted RBP17.43■□□□□ 0.38
CIPC-203ENST00000554658 PLXNB2O15031 1838 aa17.42■□□□□ 0.38
CIPC-203ENST00000554658 F6X3S4 739 aa17.42■□□□□ 0.38
CIPC-203ENST00000554658 POTEB2H3BUK9 544 aa17.42■□□□□ 0.38
CIPC-203ENST00000554658 PTPRAP18433 802 aa17.42■□□□□ 0.38
CIPC-203ENST00000554658 MDM2Q00987 491 aaPredicted RBP17.42■□□□□ 0.38
CIPC-203ENST00000554658 FAM110CQ1W6H9 321 aa17.42■□□□□ 0.38
CIPC-203ENST00000554658 CDC42EP5Q6NZY7 148 aa17.42■□□□□ 0.38
CIPC-203ENST00000554658 OGDHLQ9ULD0 1010 aa17.42■□□□□ 0.38
CIPC-203ENST00000554658 DAGLAQ9Y4D2 1042 aa17.42■□□□□ 0.38
CIPC-203ENST00000554658 AFG3L2Q9Y4W6 797 aa17.42■□□□□ 0.38
CIPC-203ENST00000554658 LOC285556D6RIA3 1793 aa17.41■□□□□ 0.38
CIPC-203ENST00000554658 TRIM32Q13049 653 aa17.41■□□□□ 0.38
CIPC-203ENST00000554658 METTL24Q5JXM2 366 aa17.41■□□□□ 0.38
CIPC-203ENST00000554658 ZNF697Q5TEC3 545 aa17.41■□□□□ 0.38
CIPC-203ENST00000554658 C9orf78Q9NZ63 289 aaPredicted RBP17.41■□□□□ 0.38
CIPC-203ENST00000554658 FAM198AQ9UFP1 575 aa17.41■□□□□ 0.38
CIPC-203ENST00000554658 PNMA3Q9UL41 463 aa17.41■□□□□ 0.38
CIPC-203ENST00000554658 PFASO15067 1338 aa17.41■□□□□ 0.38
CIPC-203ENST00000554658 EYSQ5T1H1 3165 aa17.4■□□□□ 0.38
CIPC-203ENST00000554658 TRIM75PA6NK02 468 aa17.4■□□□□ 0.38
CIPC-203ENST00000554658 ZEB1P37275 1124 aaPredicted RBP17.4■□□□□ 0.38
CIPC-203ENST00000554658 AGTPBP1Q9UPW5 1226 aa17.4■□□□□ 0.38
CIPC-203ENST00000554658 MAST2Q6P0Q8 1798 aa17.4■□□□□ 0.38
CIPC-203ENST00000554658 FRMPD3Q5JV73 1810 aa17.4■□□□□ 0.38
CIPC-203ENST00000554658 ATRNL1Q5VV63 1379 aa17.4■□□□□ 0.38
CIPC-203ENST00000554658 PHF20L1A8MW92 1017 aa17.39■□□□□ 0.37
CIPC-203ENST00000554658 DDX10Q13206 875 aaKnown RBP17.39■□□□□ 0.37
CIPC-203ENST00000554658 DIXDC1Q155Q3 683 aa17.39■□□□□ 0.37
CIPC-203ENST00000554658 LRRFIP2Q9Y608 721 aaKnown RBP17.39■□□□□ 0.37
CIPC-203ENST00000554658 PRUNE2Q8WUY3 3088 aa17.39■□□□□ 0.37
CIPC-203ENST00000554658 MYH2Q9UKX2 1941 aa17.39■□□□□ 0.37
CIPC-203ENST00000554658 PDE8BO95263 885 aa17.38■□□□□ 0.37
CIPC-203ENST00000554658 ZFPM1Q8IX07 1006 aa17.38■□□□□ 0.37
CIPC-203ENST00000554658 MAFAQ8NHW3 353 aaPredicted RBP17.38■□□□□ 0.37
CIPC-203ENST00000554658 WDR66Q8TBY9 1149 aa17.38■□□□□ 0.37
CIPC-203ENST00000554658 USP40Q9NVE5 1235 aa17.38■□□□□ 0.37
CIPC-203ENST00000554658 ATAD5Q96QE3 1844 aa17.37■□□□□ 0.37
CIPC-203ENST00000554658 LRRC24Q50LG9 513 aa17.37■□□□□ 0.37
CIPC-203ENST00000554658 TREML2Q5T2D2 321 aa17.37■□□□□ 0.37
CIPC-203ENST00000554658 VGLL2Q8N8G2 317 aa17.37■□□□□ 0.37
CIPC-203ENST00000554658 TRIB2Q92519 343 aa17.37■□□□□ 0.37
CIPC-203ENST00000554658 SUCLG2Q96I99 432 aa17.37■□□□□ 0.37
CIPC-203ENST00000554658 IFIT1P09914 478 aaKnown RBP17.36■□□□□ 0.37
CIPC-203ENST00000554658 COL6A1P12109 1028 aa17.36■□□□□ 0.37
CIPC-203ENST00000554658 PRKAR2AP13861 404 aaKnown RBP17.36■□□□□ 0.37
CIPC-203ENST00000554658 GCLCP48506 637 aaPredicted RBP17.36■□□□□ 0.37
CIPC-203ENST00000554658 LRRC26Q2I0M4 334 aa17.36■□□□□ 0.37
CIPC-203ENST00000554658 CDX2Q99626 313 aaPredicted RBP17.36■□□□□ 0.37
CIPC-203ENST00000554658 LBHD1Q9BQE6 289 aaPredicted RBP17.36■□□□□ 0.37
CIPC-203ENST00000554658 SPINK5Q9NQ38 1064 aaPredicted RBP17.36■□□□□ 0.37
CIPC-203ENST00000554658 GJD2Q9UKL4 321 aa17.36■□□□□ 0.37
CIPC-203ENST00000554658 KIF16BQ96L93 1317 aa17.36■□□□□ 0.37
CIPC-203ENST00000554658 LTBP2Q14767 1821 aa17.35■□□□□ 0.37
CIPC-203ENST00000554658 CTNND1O60716 968 aaKnown RBP17.35■□□□□ 0.37
CIPC-203ENST00000554658 RGS3P49796 1198 aa17.35■□□□□ 0.37
CIPC-203ENST00000554658 MAP3K21Q5TCX8 1036 aa17.35■□□□□ 0.37
CIPC-203ENST00000554658 CCDC84Q86UT8 332 aaPredicted RBP17.35■□□□□ 0.37
CIPC-203ENST00000554658 ZSCAN29Q8IWY8 852 aaPredicted RBP17.35■□□□□ 0.37
CIPC-203ENST00000554658 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.35■□□□□ 0.37
CIPC-203ENST00000554658 DNAH12Q6ZR08 3092 aa17.35■□□□□ 0.37
CIPC-203ENST00000554658 ENTPD3O75355 529 aa17.34■□□□□ 0.37
CIPC-203ENST00000554658 ALDH1L1O75891 902 aa17.34■□□□□ 0.37
CIPC-203ENST00000554658 CYP2B6P20813 491 aa17.34■□□□□ 0.37
CIPC-203ENST00000554658 COL9A1P20849 921 aa17.34■□□□□ 0.37
CIPC-203ENST00000554658 PUM3Q15397 648 aaKnown RBP17.34■□□□□ 0.37
CIPC-203ENST00000554658 PROCA1Q8NCQ7 364 aaPredicted RBP17.34■□□□□ 0.37
CIPC-203ENST00000554658 SYMPKQ92797 1274 aaKnown RBP17.34■□□□□ 0.37
CIPC-203ENST00000554658 KAZALD1Q96I82 304 aa17.34■□□□□ 0.37
CIPC-203ENST00000554658 FANCIQ9NVI1 1328 aa17.33■□□□□ 0.36
CIPC-203ENST00000554658 PRDX5P30044 214 aa17.33■□□□□ 0.36
CIPC-203ENST00000554658 PABPC4Q13310 644 aaKnown RBP eCLIP17.33■□□□□ 0.36
CIPC-203ENST00000554658 RFX7Q2KHR2 1363 aa17.32■□□□□ 0.36
CIPC-203ENST00000554658 LDHBP07195 334 aaKnown RBP17.32■□□□□ 0.36
CIPC-203ENST00000554658 SLURP2P0DP57 97 aa17.32■□□□□ 0.36
CIPC-203ENST00000554658 SLC4A10Q6U841 1118 aa17.32■□□□□ 0.36
CIPC-203ENST00000554658 SH3BP5LQ7L8J4 393 aa17.32■□□□□ 0.36
CIPC-203ENST00000554658 IDI2Q9BXS1 227 aa17.32■□□□□ 0.36
CIPC-203ENST00000554658 SRCIN1Q9C0H9 1055 aa17.32■□□□□ 0.36
CIPC-203ENST00000554658 BICC1Q9H694 974 aaKnown RBP17.32■□□□□ 0.36
CIPC-203ENST00000554658 IL16Q14005 1332 aa17.31■□□□□ 0.36
CIPC-203ENST00000554658 VAMP4O75379 141 aa17.31■□□□□ 0.36
CIPC-203ENST00000554658 SLC5A1P13866 664 aa17.31■□□□□ 0.36
CIPC-203ENST00000554658 ZKSCAN1P17029 563 aaPredicted RBP17.31■□□□□ 0.36
CIPC-203ENST00000554658 FGFR2P21802 821 aa17.31■□□□□ 0.36
CIPC-203ENST00000554658 MAP3K10Q02779 954 aa17.31■□□□□ 0.36
CIPC-203ENST00000554658 CCDC27Q2M243 656 aa17.31■□□□□ 0.36
CIPC-203ENST00000554658 WWC1Q8IX03 1113 aa17.31■□□□□ 0.36
CIPC-203ENST00000554658 SOCS4Q8WXH5 440 aa17.31■□□□□ 0.36
CIPC-203ENST00000554658 ASCC2Q9H1I8 757 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms