RNA–Protein interactions for RNA: ENST00000554384.1

CHD8-207, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 3

Gene CHD8, Length 735 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-207ENST00000554384 DOC2BQ14184 412 aa8.08□□□□□ -1.12
CHD8-207ENST00000554384 GRIK4Q16099 956 aa8.08□□□□□ -1.12
CHD8-207ENST00000554384 DUOXA2Q1HG44 320 aa8.08□□□□□ -1.12
CHD8-207ENST00000554384 LRFN4Q6PJG9 635 aa8.08□□□□□ -1.12
CHD8-207ENST00000554384 CCDC81Q6ZN84 652 aa8.08□□□□□ -1.12
CHD8-207ENST00000554384 VPS37DQ86XT2 251 aa8.08□□□□□ -1.12
CHD8-207ENST00000554384 PPT2Q9UMR5 302 aa8.08□□□□□ -1.12
CHD8-207ENST00000554384 POLR3KQ9Y2Y1 108 aaPredicted RBP8.08□□□□□ -1.12
CHD8-207ENST00000554384 GRIN3BO60391 1043 aa8.07□□□□□ -1.12
CHD8-207ENST00000554384 MCM4P33991 863 aa8.07□□□□□ -1.12
CHD8-207ENST00000554384 GTF2F1P35269 517 aaKnown RBP eCLIP8.07□□□□□ -1.12
CHD8-207ENST00000554384 TRIM28Q13263 835 aaKnown RBP8.07□□□□□ -1.12
CHD8-207ENST00000554384 KIAA1211Q6ZU35 1233 aa8.07□□□□□ -1.12
CHD8-207ENST00000554384 CCDC84Q86UT8 332 aaPredicted RBP8.07□□□□□ -1.12
CHD8-207ENST00000554384 MAP4K3Q8IVH8 894 aa8.07□□□□□ -1.12
CHD8-207ENST00000554384 AGGF1Q8N302 714 aaeCLIP8.07□□□□□ -1.12
CHD8-207ENST00000554384 DTWD1Q8N5C7 304 aa8.07□□□□□ -1.12
CHD8-207ENST00000554384 PLPPR2Q96GM1 343 aa8.07□□□□□ -1.12
CHD8-207ENST00000554384 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.07□□□□□ -1.125e-9■□□□□ 9.6
CHD8-207ENST00000554384 WDR18Q9BV38 432 aa8.07□□□□□ -1.12
CHD8-207ENST00000554384 MRVI1Q9Y6F6 885 aa8.07□□□□□ -1.12
CHD8-207ENST00000554384 AOC2O75106 756 aa8.06□□□□□ -1.12
CHD8-207ENST00000554384 ALX3O95076 343 aa8.06□□□□□ -1.12
CHD8-207ENST00000554384 ATP2B1P20020 1258 aa8.06□□□□□ -1.12
CHD8-207ENST00000554384 CLCQ05315 142 aa8.06□□□□□ -1.12
CHD8-207ENST00000554384 WIPI1Q5MNZ9 446 aaPredicted RBP8.06□□□□□ -1.12
CHD8-207ENST00000554384 GK5Q6ZS86 529 aa8.06□□□□□ -1.12
CHD8-207ENST00000554384 ACAD11Q709F0 780 aa8.06□□□□□ -1.12
CHD8-207ENST00000554384 C12orf40Q86WS4 652 aa8.06□□□□□ -1.12
CHD8-207ENST00000554384 SLITRK4Q8IW52 837 aa8.06□□□□□ -1.12
CHD8-207ENST00000554384 DNAJC2Q99543 621 aaKnown RBP8.06□□□□□ -1.12
CHD8-207ENST00000554384 PPP1R9AQ9ULJ8 1098 aa8.06□□□□□ -1.12
CHD8-207ENST00000554384 CORINQ9Y5Q5 1042 aa8.06□□□□□ -1.12
CHD8-207ENST00000554384 LOC105371045A0A1W2PR82 267 aa8.05□□□□□ -1.12
CHD8-207ENST00000554384 GFRA2O00451 464 aa8.05□□□□□ -1.12
CHD8-207ENST00000554384 RPL6Q02878 288 aaKnown RBP8.05□□□□□ -1.12
CHD8-207ENST00000554384 MPP2Q14168 576 aa8.05□□□□□ -1.12
CHD8-207ENST00000554384 SF3A1Q15459 793 aaKnown RBP8.05□□□□□ -1.12
CHD8-207ENST00000554384 AKAP4Q5JQC9 854 aa8.05□□□□□ -1.12
CHD8-207ENST00000554384 REC114Q7Z4M0 266 aa8.05□□□□□ -1.12
CHD8-207ENST00000554384 LRRC3Q9BY71 257 aa8.05□□□□□ -1.12
CHD8-207ENST00000554384 RAD18Q9NS91 495 aa8.05□□□□□ -1.12
CHD8-207ENST00000554384 KRT82Q9NSB4 513 aa8.05□□□□□ -1.12
CHD8-207ENST00000554384 BPNT1O95861 308 aa8.04□□□□□ -1.12
CHD8-207ENST00000554384 DRD2P14416 443 aa8.04□□□□□ -1.12
CHD8-207ENST00000554384 SOX9P48436 509 aa8.04□□□□□ -1.12
CHD8-207ENST00000554384 CWF19L2Q2TBE0 894 aaKnown RBP8.04□□□□□ -1.12
CHD8-207ENST00000554384 KIF4BQ2VIQ3 1234 aa8.04□□□□□ -1.12
CHD8-207ENST00000554384 SEC16BQ96JE7 1060 aa8.04□□□□□ -1.12
CHD8-207ENST00000554384 RUSC1Q9BVN2 902 aa8.04□□□□□ -1.12
CHD8-207ENST00000554384 SEMA6BQ9H3T3 888 aa8.04□□□□□ -1.12
CHD8-207ENST00000554384 PCDHGC5Q9Y5F6 944 aa8.04□□□□□ -1.12
CHD8-207ENST00000554384 ROBO2Q9HCK4 1378 aa8.03□□□□□ -1.12
CHD8-207ENST00000554384 ETFBP38117 255 aa8.03□□□□□ -1.12
CHD8-207ENST00000554384 ZC3H12AQ5D1E8 599 aaKnown RBP8.03□□□□□ -1.12
CHD8-207ENST00000554384 EXOSC6Q5RKV6 272 aaKnown RBP8.03□□□□□ -1.12
CHD8-207ENST00000554384 FBXW10Q5XX13 1052 aa8.03□□□□□ -1.12
CHD8-207ENST00000554384 ANAPC16Q96DE5 110 aa8.03□□□□□ -1.12
CHD8-207ENST00000554384 TMPRSS13Q9BYE2 586 aa8.03□□□□□ -1.12
CHD8-207ENST00000554384 ANTXR1Q9H6X2 564 aa8.03□□□□□ -1.12
CHD8-207ENST00000554384 PCDHB14Q9Y5E9 798 aa8.03□□□□□ -1.12
CHD8-207ENST00000554384 PRAMEF27A3QJZ7 478 aa8.02□□□□□ -1.13
CHD8-207ENST00000554384 ELNP15502 786 aa8.02□□□□□ -1.13
CHD8-207ENST00000554384 PPM1JQ5JR12 505 aa8.02□□□□□ -1.13
CHD8-207ENST00000554384 LCE3BQ5TA77 95 aa8.02□□□□□ -1.13
CHD8-207ENST00000554384 IGF2-ASQ6U949 168 aa8.02□□□□□ -1.13
CHD8-207ENST00000554384 ELMO3Q96BJ8 720 aa8.02□□□□□ -1.13
CHD8-207ENST00000554384 SSBP05455 408 aaKnown RBP eCLIP8.01□□□□□ -1.13
CHD8-207ENST00000554384 SPATA31C1P0DKV0 1188 aa8.01□□□□□ -1.13
CHD8-207ENST00000554384 GATA4P43694 442 aa8.01□□□□□ -1.13
CHD8-207ENST00000554384 PRRT3Q5FWE3 981 aa8.01□□□□□ -1.13
CHD8-207ENST00000554384 CYFIP1Q7L576 1253 aa8.01□□□□□ -1.13
CHD8-207ENST00000554384 ZC3HAV1Q7Z2W4 902 aaKnown RBP8.01□□□□□ -1.13
CHD8-207ENST00000554384 CPLX3Q8WVH0 158 aa8.01□□□□□ -1.13
CHD8-207ENST00000554384 UBXN4Q92575 508 aa8.01□□□□□ -1.13
CHD8-207ENST00000554384 ZNF408Q9H9D4 720 aa8.01□□□□□ -1.13
CHD8-207ENST00000554384 HIF3AQ9Y2N7 669 aa8.01□□□□□ -1.13
CHD8-207ENST00000554384 SPDYE3A6NKU9 549 aa8□□□□□ -1.13
CHD8-207ENST00000554384 TMPRSS2O15393 492 aa8□□□□□ -1.13
CHD8-207ENST00000554384 EIF4EBP3O60516 100 aaPredicted RBP8□□□□□ -1.13
CHD8-207ENST00000554384 SLFN14P0C7P3 912 aa8□□□□□ -1.13
CHD8-207ENST00000554384 ZNF165P49910 485 aa8□□□□□ -1.13
CHD8-207ENST00000554384 NUTM2GQ5VZR2 741 aa8□□□□□ -1.13
CHD8-207ENST00000554384 SCARA3Q6AZY7 606 aa8□□□□□ -1.13
CHD8-207ENST00000554384 HDXQ7Z353 690 aa8□□□□□ -1.13
CHD8-207ENST00000554384 FAM169BQ8N8A8 192 aa8□□□□□ -1.13
CHD8-207ENST00000554384 C12orf50Q8NA57 414 aaPredicted RBP8□□□□□ -1.13
CHD8-207ENST00000554384 SPATA32Q96LK8 384 aa8□□□□□ -1.13
CHD8-207ENST00000554384 FERD3LQ96RJ6 166 aa8□□□□□ -1.13
CHD8-207ENST00000554384 SRRTQ9BXP5 876 aaKnown RBP8□□□□□ -1.13
CHD8-207ENST00000554384 DISC1Q9NRI5 854 aa8□□□□□ -1.13
CHD8-207ENST00000554384 AP4E1Q9UPM8 1137 aa8□□□□□ -1.13
CHD8-207ENST00000554384 F8W735 103 aaPredicted RBP7.99□□□□□ -1.13
CHD8-207ENST00000554384 DNAJA2O60884 412 aa7.99□□□□□ -1.13
CHD8-207ENST00000554384 HTR3BO95264 441 aa7.99□□□□□ -1.13
CHD8-207ENST00000554384 GRK4P32298 578 aa7.99□□□□□ -1.13
CHD8-207ENST00000554384 ID3Q02535 119 aa7.99□□□□□ -1.13
CHD8-207ENST00000554384 RSPO4Q2I0M5 234 aaPredicted RBP7.99□□□□□ -1.13
CHD8-207ENST00000554384 RUFY4Q6ZNE9 571 aa7.99□□□□□ -1.13
CHD8-207ENST00000554384 UBE3DQ7Z6J8 389 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms