RNA–Protein interactions for RNA: ENST00000554306.1

KTN1-213, Transcript of kinectin 1, humanhuman

TSL 3

Gene KTN1, Length 476 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-213ENST00000554306 U2AF1L5P0DN76 240 aaPredicted RBP8.84□□□□□ -0.99
KTN1-213ENST00000554306 GRNP28799 593 aaKnown RBP8.84□□□□□ -0.99
KTN1-213ENST00000554306 U2AF1Q01081 240 aaKnown RBP eCLIP8.84□□□□□ -0.99
KTN1-213ENST00000554306 FKBP5Q13451 457 aaPredicted RBP8.84□□□□□ -0.99
KTN1-213ENST00000554306 EIF4A2Q14240 407 aaKnown RBP8.84□□□□□ -0.99
KTN1-213ENST00000554306 TRAPPC3LQ5T215 181 aa8.84□□□□□ -0.99
KTN1-213ENST00000554306 PNISRQ8TF01 805 aaKnown RBP8.84□□□□□ -0.99
KTN1-213ENST00000554306 ZMIZ1Q9ULJ6 1067 aa8.84□□□□□ -0.99
KTN1-213ENST00000554306 RGPD2P0DJD1 1756 aa8.84□□□□□ -1
KTN1-213ENST00000554306 FAM83GA6ND36 823 aa8.83□□□□□ -1
KTN1-213ENST00000554306 PRMT3O60678 531 aa8.83□□□□□ -1
KTN1-213ENST00000554306 ATG7O95352 703 aa8.83□□□□□ -1
KTN1-213ENST00000554306 NEFMP07197 916 aa8.83□□□□□ -1
KTN1-213ENST00000554306 ARID4AP29374 1257 aaPredicted RBP8.83□□□□□ -1
KTN1-213ENST00000554306 IL13P35225 146 aa8.83□□□□□ -1
KTN1-213ENST00000554306 PSAPL1Q6NUJ1 521 aa8.83□□□□□ -1
KTN1-213ENST00000554306 ANKRD24Q8TF21 1146 aa8.83□□□□□ -1
KTN1-213ENST00000554306 COL26A1Q96A83 441 aa8.83□□□□□ -1
KTN1-213ENST00000554306 PRIMPOLQ96LW4 560 aa8.83□□□□□ -1
KTN1-213ENST00000554306 LRFN2Q9ULH4 789 aa8.83□□□□□ -1
KTN1-213ENST00000554306 PLCH1Q4KWH8 1693 aa8.83□□□□□ -1
KTN1-213ENST00000554306 COL3A1P02461 1466 aaPredicted RBP8.83□□□□□ -1
KTN1-213ENST00000554306 NWD2Q9ULI1 1742 aa8.83□□□□□ -1
KTN1-213ENST00000554306 LMO7Q8WWI1 1683 aa8.82□□□□□ -1
KTN1-213ENST00000554306 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.82□□□□□ -1
KTN1-213ENST00000554306 RGS9O75916 674 aaPredicted RBP8.82□□□□□ -1
KTN1-213ENST00000554306 RARAP10276 462 aa8.82□□□□□ -1
KTN1-213ENST00000554306 DHX32Q7L7V1 743 aaKnown RBP8.82□□□□□ -1
KTN1-213ENST00000554306 NUDT8Q8WV74 236 aa8.82□□□□□ -1
KTN1-213ENST00000554306 BTG4Q9NY30 223 aa8.82□□□□□ -1
KTN1-213ENST00000554306 CAMTA1Q9Y6Y1 1673 aa8.81□□□□□ -1
KTN1-213ENST00000554306 FAM229AH3BQW9 127 aa8.81□□□□□ -1
KTN1-213ENST00000554306 EGFRP00533 1210 aa8.81□□□□□ -1
KTN1-213ENST00000554306 OCLNQ16625 522 aa8.81□□□□□ -1
KTN1-213ENST00000554306 COX20Q5RI15 118 aa8.81□□□□□ -1
KTN1-213ENST00000554306 TOM1L2Q6ZVM7 507 aa8.81□□□□□ -1
KTN1-213ENST00000554306 KRT25Q7Z3Z0 450 aa8.81□□□□□ -1
KTN1-213ENST00000554306 FAM35AQ86V20 835 aa8.81□□□□□ -1
KTN1-213ENST00000554306 TREML1Q86YW5 311 aa8.81□□□□□ -1
KTN1-213ENST00000554306 TRPM4Q8TD43 1214 aa8.81□□□□□ -1
KTN1-213ENST00000554306 STK32AQ8WU08 396 aa8.81□□□□□ -1
KTN1-213ENST00000554306 C8orf37Q96NL8 207 aa8.81□□□□□ -1
KTN1-213ENST00000554306 NLRP2Q9NX02 1062 aa8.81□□□□□ -1
KTN1-213ENST00000554306 FRRS1LQ9P0K9 344 aa8.81□□□□□ -1
KTN1-213ENST00000554306 RTCBQ9Y3I0 505 aaKnown RBP8.81□□□□□ -1
KTN1-213ENST00000554306 RGPD1P0DJD0 1748 aa8.8□□□□□ -1
KTN1-213ENST00000554306 OPLAHO14841 1288 aa8.8□□□□□ -1
KTN1-213ENST00000554306 HMOX1P09601 288 aa8.8□□□□□ -1
KTN1-213ENST00000554306 TARSP26639 723 aaKnown RBP8.8□□□□□ -1
KTN1-213ENST00000554306 AFF1P51825 1210 aaKnown RBP8.8□□□□□ -1
KTN1-213ENST00000554306 RAC1P63000 192 aa8.8□□□□□ -1
KTN1-213ENST00000554306 SULT6B1Q6IMI4 303 aa8.8□□□□□ -1
KTN1-213ENST00000554306 C16orf46Q6P387 395 aa8.8□□□□□ -1
KTN1-213ENST00000554306 CCDC97Q96F63 343 aaPredicted RBP8.8□□□□□ -1
KTN1-213ENST00000554306 ZFATQ9P243 1243 aa8.8□□□□□ -1
KTN1-213ENST00000554306 NAGPAQ9UK23 515 aa8.8□□□□□ -1
KTN1-213ENST00000554306 COL5A2P05997 1499 aaPredicted RBP8.8□□□□□ -1
KTN1-213ENST00000554306 WDR17Q8IZU2 1322 aa8.8□□□□□ -1
KTN1-213ENST00000554306 MAPK8IP3Q9UPT6 1336 aa8.8□□□□□ -1
KTN1-213ENST00000554306 A0A0A0MRY4 1105 aa8.79□□□□□ -1
KTN1-213ENST00000554306 C9orf172C9J069 976 aa8.79□□□□□ -1
KTN1-213ENST00000554306 PTCD1O75127 700 aaKnown RBP8.79□□□□□ -1
KTN1-213ENST00000554306 SASH3O75995 380 aa8.79□□□□□ -1
KTN1-213ENST00000554306 ELNP15502 786 aa8.79□□□□□ -1
KTN1-213ENST00000554306 BRD2P25440 801 aaKnown RBP8.79□□□□□ -1
KTN1-213ENST00000554306 GPLD1P80108 840 aa8.79□□□□□ -1
KTN1-213ENST00000554306 DOC2BQ14184 412 aa8.79□□□□□ -1
KTN1-213ENST00000554306 NBPF6Q5VWK0 638 aa8.79□□□□□ -1
KTN1-213ENST00000554306 PBXIP1Q96AQ6 731 aa8.79□□□□□ -1
KTN1-213ENST00000554306 RUNDC1Q96C34 613 aa8.79□□□□□ -1
KTN1-213ENST00000554306 NBPF4Q96M43 638 aa8.79□□□□□ -1
KTN1-213ENST00000554306 SERPINA10Q9UK55 444 aa8.79□□□□□ -1
KTN1-213ENST00000554306 CCDC9Q9Y3X0 531 aaKnown RBP8.79□□□□□ -1
KTN1-213ENST00000554306 NRAPQ86VF7 1730 aa8.79□□□□□ -1
KTN1-213ENST00000554306 LRP6O75581 1613 aa8.79□□□□□ -1
KTN1-213ENST00000554306 IGSF1Q8N6C5 1336 aa8.79□□□□□ -1
KTN1-213ENST00000554306 XYLBO75191 536 aa8.78□□□□□ -1
KTN1-213ENST00000554306 CPB1P15086 417 aa8.78□□□□□ -1
KTN1-213ENST00000554306 GRIK4Q16099 956 aa8.78□□□□□ -1
KTN1-213ENST00000554306 UNC5CLQ8IV45 518 aa8.78□□□□□ -1
KTN1-213ENST00000554306 CCDC146Q8IYE0 955 aa8.78□□□□□ -1
KTN1-213ENST00000554306 RGL4Q8IZJ4 473 aa8.78□□□□□ -1
KTN1-213ENST00000554306 CMTR1Q8N1G2 835 aaKnown RBP8.78□□□□□ -1
KTN1-213ENST00000554306 USHBP1Q8N6Y0 703 aa8.78□□□□□ -1
KTN1-213ENST00000554306 CXXC1Q9P0U4 656 aaPredicted RBP8.78□□□□□ -1
KTN1-213ENST00000554306 USP21Q9UK80 565 aa8.78□□□□□ -1
KTN1-213ENST00000554306 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.77□□□□□ -1
KTN1-213ENST00000554306 SLIT2O94813 1529 aa8.77□□□□□ -1.01
KTN1-213ENST00000554306 PRKAR2BP31323 418 aa8.77□□□□□ -1.01
KTN1-213ENST00000554306 NRLP54845 237 aa8.77□□□□□ -1.01
KTN1-213ENST00000554306 TMEM164Q5U3C3 297 aa8.77□□□□□ -1.01
KTN1-213ENST00000554306 ELMSAN1Q6PJG2 1045 aa8.77□□□□□ -1.01
KTN1-213ENST00000554306 ERICH6Q7L0X2 663 aa8.77□□□□□ -1.01
KTN1-213ENST00000554306 RAPGEF4Q8WZA2 1011 aa8.77□□□□□ -1.01
KTN1-213ENST00000554306 TTC9Q92623 222 aa8.77□□□□□ -1.01
KTN1-213ENST00000554306 LPIN3Q9BQK8 851 aa8.77□□□□□ -1.01
KTN1-213ENST00000554306 CARD10Q9BWT7 1032 aa8.77□□□□□ -1.01
KTN1-213ENST00000554306 CRB1P82279 1406 aa8.77□□□□□ -1.01
KTN1-213ENST00000554306 AFF2P51816 1311 aa8.77□□□□□ -1.01
KTN1-213ENST00000554306 PARP4Q9UKK3 1724 aaKnown RBP8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms