RNA–Protein interactions for RNA: ENST00000554258.1

NEK9-204, Transcript of NIMA related kinase 9, humanhuman

TSL 3

Gene NEK9, Length 578 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK9-204ENST00000554258 FAM110CQ1W6H9 321 aa21.39■■□□□ 1.01
NEK9-204ENST00000554258 MBIPQ9NS73 344 aa21.39■■□□□ 1.01
NEK9-204ENST00000554258 TRIM35Q9UPQ4 493 aa21.39■■□□□ 1.01
NEK9-204ENST00000554258 ZHX2Q9Y6X8 837 aa21.39■■□□□ 1.01
NEK9-204ENST00000554258 MYO9BQ13459 2157 aa21.38■■□□□ 1.01
NEK9-204ENST00000554258 IFIT5Q13325 482 aaKnown RBP21.38■■□□□ 1.01
NEK9-204ENST00000554258 CCDC146Q8IYE0 955 aa21.38■■□□□ 1.01
NEK9-204ENST00000554258 ADAMTS19Q8TE59 1207 aa21.38■■□□□ 1.01
NEK9-204ENST00000554258 TRIB2Q92519 343 aa21.38■■□□□ 1.01
NEK9-204ENST00000554258 NCBP3Q53F19 620 aaKnown RBP21.37■■□□□ 1.01
NEK9-204ENST00000554258 C9orf50Q5SZB4 431 aa21.37■■□□□ 1.01
NEK9-204ENST00000554258 FAM151AQ8WW52 585 aa21.37■■□□□ 1.01
NEK9-204ENST00000554258 PICK1Q9NRD5 415 aa21.37■■□□□ 1.01
NEK9-204ENST00000554258 GJD2Q9UKL4 321 aa21.37■■□□□ 1.01
NEK9-204ENST00000554258 PLXNB2O15031 1838 aa21.36■■□□□ 1.01
NEK9-204ENST00000554258 MAP3K21Q5TCX8 1036 aa21.36■■□□□ 1.01
NEK9-204ENST00000554258 APOBEC3HQ6NTF7 200 aaKnown RBP21.36■■□□□ 1.01
NEK9-204ENST00000554258 ATXN2LQ8WWM7 1075 aaKnown RBP21.36■■□□□ 1.01
NEK9-204ENST00000554258 CHMP3Q9Y3E7 222 aa21.36■■□□□ 1.01
NEK9-204ENST00000554258 MUC6Q6W4X9 2439 aa21.35■■□□□ 1.01
NEK9-204ENST00000554258 CHAF1AQ13111 956 aaPredicted RBP21.35■■□□□ 1.01
NEK9-204ENST00000554258 TBC1D22AQ8WUA7 517 aa21.35■■□□□ 1.01
NEK9-204ENST00000554258 FAM84BQ96KN1 310 aaPredicted RBP21.35■■□□□ 1.01
NEK9-204ENST00000554258 UHRF1Q96T88 793 aaPredicted RBP21.35■■□□□ 1.01
NEK9-204ENST00000554258 C1QTNF1Q9BXJ1 281 aa21.35■■□□□ 1.01
NEK9-204ENST00000554258 HCN4Q9Y3Q4 1203 aa21.35■■□□□ 1.01
NEK9-204ENST00000554258 ARIH1Q9Y4X5 557 aaPredicted RBP21.35■■□□□ 1.01
NEK9-204ENST00000554258 APAF1O14727 1248 aa21.34■■□□□ 1.01
NEK9-204ENST00000554258 TCP10Q12799 353 aa21.34■■□□□ 1.01
NEK9-204ENST00000554258 GCKRQ14397 625 aa21.34■■□□□ 1.01
NEK9-204ENST00000554258 CCDC30Q5VVM6 783 aa21.34■■□□□ 1.01
NEK9-204ENST00000554258 PNMA3Q9UL41 463 aa21.34■■□□□ 1.01
NEK9-204ENST00000554258 AFG3L2Q9Y4W6 797 aa21.34■■□□□ 1.01
NEK9-204ENST00000554258 FRMPD3Q5JV73 1810 aa21.34■■□□□ 1.01
NEK9-204ENST00000554258 PTPRAP18433 802 aa21.33■■□□□ 1.01
NEK9-204ENST00000554258 CASP7P55210 303 aa21.33■■□□□ 1.01
NEK9-204ENST00000554258 SCYL3Q8IZE3 742 aa21.33■■□□□ 1.01
NEK9-204ENST00000554258 ASB2Q96Q27 587 aa21.33■■□□□ 1.01
NEK9-204ENST00000554258 MRIQ9BWK5 157 aa21.33■■□□□ 1.01
NEK9-204ENST00000554258 SENP6Q9GZR1 1112 aaPredicted RBP21.33■■□□□ 1.01
NEK9-204ENST00000554258 CNNM1Q9NRU3 951 aa21.33■■□□□ 1.01
NEK9-204ENST00000554258 IQSEC3Q9UPP2 1182 aaPredicted RBP21.33■■□□□ 1.01
NEK9-204ENST00000554258 AGTPBP1Q9UPW5 1226 aa21.33■■□□□ 1.01
NEK9-204ENST00000554258 PHIPQ8WWQ0 1821 aa21.32■■□□□ 1
NEK9-204ENST00000554258 CYP2B6P20813 491 aa21.32■■□□□ 1
NEK9-204ENST00000554258 LDHAL6AQ6ZMR3 332 aa21.32■■□□□ 1
NEK9-204ENST00000554258 MAST3O60307 1309 aa21.31■■□□□ 1
NEK9-204ENST00000554258 FRAT2O75474 233 aaPredicted RBP21.31■■□□□ 1
NEK9-204ENST00000554258 UBE4AQ14139 1066 aa21.31■■□□□ 1
NEK9-204ENST00000554258 GRIN2CQ14957 1233 aa21.31■■□□□ 1
NEK9-204ENST00000554258 TAF7LQ5H9L4 462 aa21.31■■□□□ 1
NEK9-204ENST00000554258 LHX8Q68G74 356 aa21.31■■□□□ 1
NEK9-204ENST00000554258 VPS37DQ86XT2 251 aa21.31■■□□□ 1
NEK9-204ENST00000554258 IL27Q8NEV9 243 aa21.31■■□□□ 1
NEK9-204ENST00000554258 CHMP4AQ9BY43 222 aa21.31■■□□□ 1
NEK9-204ENST00000554258 THEGQ9P2T0 379 aa21.31■■□□□ 1
NEK9-204ENST00000554258 DOCK2Q92608 1830 aa21.31■■□□□ 1
NEK9-204ENST00000554258 TRIM75PA6NK02 468 aa21.3■■□□□ 1
NEK9-204ENST00000554258 GCLCP48506 637 aaPredicted RBP21.3■■□□□ 1
NEK9-204ENST00000554258 ATN1P54259 1190 aaPredicted RBP21.3■■□□□ 1
NEK9-204ENST00000554258 PPM1EQ8WY54 764 aa21.3■■□□□ 1
NEK9-204ENST00000554258 MYH16Q9H6N6 1097 aa21.3■■□□□ 1
NEK9-204ENST00000554258 DOCK1Q14185 1865 aa21.3■■□□□ 1
NEK9-204ENST00000554258 CACNB2Q08289 660 aaPredicted RBP21.29■■□□□ 1
NEK9-204ENST00000554258 TREML2Q5T2D2 321 aa21.29■■□□□ 1
NEK9-204ENST00000554258 HHIPL2Q6UWX4 724 aa21.29■■□□□ 1
NEK9-204ENST00000554258 ZNF594Q96JF6 807 aaPredicted RBP21.29■■□□□ 1
NEK9-204ENST00000554258 TCF20Q9UGU0 1960 aaKnown RBP21.28■■□□□ 1
NEK9-204ENST00000554258 ZKSCAN1P17029 563 aaPredicted RBP21.28■■□□□ 1
NEK9-204ENST00000554258 CCND3P30281 292 aaPredicted RBP21.28■■□□□ 1
NEK9-204ENST00000554258 MRPS5P82675 430 aaKnown RBP21.28■■□□□ 1
NEK9-204ENST00000554258 CCDC27Q2M243 656 aa21.28■■□□□ 1
NEK9-204ENST00000554258 SNX27Q96L92 541 aa21.28■■□□□ 1
NEK9-204ENST00000554258 PHF20L1A8MW92 1017 aa21.27■■□□□ 1
NEK9-204ENST00000554258 RTP1P59025 263 aa21.27■■□□□ 1
NEK9-204ENST00000554258 TRMT44Q8IYL2 757 aaKnown RBP21.27■■□□□ 1
NEK9-204ENST00000554258 C8orf58Q8NAV2 365 aa21.27■■□□□ 1
NEK9-204ENST00000554258 XRCC5P13010 732 aaKnown RBP21.26■□□□□ 0.99
NEK9-204ENST00000554258 FOXO4P98177 505 aa21.26■□□□□ 0.99
NEK9-204ENST00000554258 NFIAQ12857 509 aa21.26■□□□□ 0.99
NEK9-204ENST00000554258 CCDC57Q2TAC2 916 aa21.26■□□□□ 0.99
NEK9-204ENST00000554258 BADQ92934 168 aa21.26■□□□□ 0.99
NEK9-204ENST00000554258 NUDT12Q9BQG2 462 aa21.26■□□□□ 0.99
NEK9-204ENST00000554258 PRDM5Q9NQX1 630 aaPredicted RBP21.26■□□□□ 0.99
NEK9-204ENST00000554258 ATP11BQ9Y2G3 1177 aa21.26■□□□□ 0.99
NEK9-204ENST00000554258 ZNF853P0CG23 659 aa21.25■□□□□ 0.99
NEK9-204ENST00000554258 SOCS4Q8WXH5 440 aa21.25■□□□□ 0.99
NEK9-204ENST00000554258 SUGT1Q9Y2Z0 365 aa21.25■□□□□ 0.99
NEK9-204ENST00000554258 LRRFIP2Q9Y608 721 aaKnown RBP21.25■□□□□ 0.99
NEK9-204ENST00000554258 PDE3AQ14432 1141 aa21.24■□□□□ 0.99
NEK9-204ENST00000554258 CDC42EP5Q6NZY7 148 aa21.24■□□□□ 0.99
NEK9-204ENST00000554258 FBXO33Q7Z6M2 555 aa21.24■□□□□ 0.99
NEK9-204ENST00000554258 STK31Q9BXU1 1019 aa21.24■□□□□ 0.99
NEK9-204ENST00000554258 LOC285556D6RIA3 1793 aa21.23■□□□□ 0.99
NEK9-204ENST00000554258 LMBR1LQ6UX01 489 aa21.23■□□□□ 0.99
NEK9-204ENST00000554258 RNPC3Q96LT9 517 aaKnown RBP21.23■□□□□ 0.99
NEK9-204ENST00000554258 IFT57Q9NWB7 429 aa21.23■□□□□ 0.99
NEK9-204ENST00000554258 FAM198AQ9UFP1 575 aa21.23■□□□□ 0.99
NEK9-204ENST00000554258 RLFQ13129 1914 aa21.23■□□□□ 0.99
NEK9-204ENST00000554258 GNAI1P63096 354 aa21.22■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms