RNA–Protein interactions for RNA: ENST00000554057.5

MTHFD1-205, Transcript of methylenetetrahydrofolate dehydrogenase, cyclohydrolase and formyltetrahydrofolate synthetase 1, humanhuman

TSL 4

Gene MTHFD1, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1-205ENST00000554057 DDX49Q9Y6V7 483 aaKnown RBP8.62□□□□□ -1.03
MTHFD1-205ENST00000554057 GRM8O00222 908 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 ECM2O94769 699 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 TPM2P07951 284 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 GNAI3P08754 354 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 SDSP20132 328 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 MCCP23508 829 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 CRKP46108 304 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 NASPP49321 788 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 FXR1P51114 621 aaKnown RBP eCLIP8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 TERF1P54274 439 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 CACNB3P54284 484 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 MAP3K9P80192 1104 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 SLC4A8Q2Y0W8 1093 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 GAS2L3Q86XJ1 694 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 DDX55Q8NHQ9 600 aaKnown RBP eCLIP8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 TDRD7Q8NHU6 1098 aaKnown RBP8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 UBE2Q2Q8WVN8 375 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 PUS3Q9BZE2 481 aaKnown RBP8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 ARHGAP39Q9C0H5 1083 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 SRCIN1Q9C0H9 1055 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 ZFYVE28Q9HCC9 887 aa8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 IQSEC3Q9UPP2 1182 aaPredicted RBP8.61□□□□□ -1.03
MTHFD1-205ENST00000554057 GNAI2P04899 355 aa8.6□□□□□ -1.03
MTHFD1-205ENST00000554057 HIBADHP31937 336 aaKnown RBP8.6□□□□□ -1.03
MTHFD1-205ENST00000554057 GTF2A2P52657 109 aa8.6□□□□□ -1.03
MTHFD1-205ENST00000554057 CHAF1AQ13111 956 aaPredicted RBP8.6□□□□□ -1.03
MTHFD1-205ENST00000554057 UBE4AQ14139 1066 aa8.6□□□□□ -1.03
MTHFD1-205ENST00000554057 ZSCAN30Q86W11 494 aa8.6□□□□□ -1.03
MTHFD1-205ENST00000554057 SH3TC2Q8TF17 1288 aa8.6□□□□□ -1.03
MTHFD1-205ENST00000554057 INTS4Q96HW7 963 aaKnown RBP8.6□□□□□ -1.03
MTHFD1-205ENST00000554057 FAM84BQ96KN1 310 aaPredicted RBP8.6□□□□□ -1.03
MTHFD1-205ENST00000554057 LMBRD1Q9NUN5 540 aa8.6□□□□□ -1.03
MTHFD1-205ENST00000554057 COLQQ9Y215 455 aaPredicted RBP8.6□□□□□ -1.03
MTHFD1-205ENST00000554057 CSADQ9Y600 493 aa8.6□□□□□ -1.03
MTHFD1-205ENST00000554057 SNCAIPQ9Y6H5 919 aa8.6□□□□□ -1.03
MTHFD1-205ENST00000554057 SPDYE5A6NIY4 337 aa8.59□□□□□ -1.03
MTHFD1-205ENST00000554057 RRP9O43818 475 aaKnown RBP8.59□□□□□ -1.03
MTHFD1-205ENST00000554057 MBD3O95983 291 aa8.59□□□□□ -1.03
MTHFD1-205ENST00000554057 PRKCSHP14314 528 aaPredicted RBP8.59□□□□□ -1.03
MTHFD1-205ENST00000554057 MCM5P33992 734 aa8.59□□□□□ -1.03
MTHFD1-205ENST00000554057 TNNI2P48788 182 aa8.59□□□□□ -1.03
MTHFD1-205ENST00000554057 PDE1AP54750 535 aa8.59□□□□□ -1.03
MTHFD1-205ENST00000554057 NBPF11Q86T75 865 aa8.59□□□□□ -1.03
MTHFD1-205ENST00000554057 SUCLG2Q96I99 432 aa8.59□□□□□ -1.03
MTHFD1-205ENST00000554057 NAP1L5Q96NT1 182 aaPredicted RBP8.59□□□□□ -1.03
MTHFD1-205ENST00000554057 WRNIP1Q96S55 665 aa8.59□□□□□ -1.03
MTHFD1-205ENST00000554057 C9orf78Q9NZ63 289 aaPredicted RBP8.59□□□□□ -1.03
MTHFD1-205ENST00000554057 STAP2Q9UGK3 403 aa8.59□□□□□ -1.03
MTHFD1-205ENST00000554057 BTBD19C9JJ37 291 aa8.58□□□□□ -1.04
MTHFD1-205ENST00000554057 H0YGN5 161 aa8.58□□□□□ -1.04
MTHFD1-205ENST00000554057 TLR2O60603 784 aa8.58□□□□□ -1.04
MTHFD1-205ENST00000554057 LACTBP83111 547 aaPredicted RBP8.58□□□□□ -1.04
MTHFD1-205ENST00000554057 CUL4AQ13619 759 aa8.58□□□□□ -1.04
MTHFD1-205ENST00000554057 ARHGEF6Q15052 776 aa8.58□□□□□ -1.04
MTHFD1-205ENST00000554057 GLIPR1L2Q4G1C9 344 aa8.58□□□□□ -1.04
MTHFD1-205ENST00000554057 MCTP1Q6DN14 999 aa8.58□□□□□ -1.04
MTHFD1-205ENST00000554057 SLC4A10Q6U841 1118 aa8.58□□□□□ -1.04
MTHFD1-205ENST00000554057 VPS37DQ86XT2 251 aa8.58□□□□□ -1.04
MTHFD1-205ENST00000554057 ZKSCAN4Q969J2 545 aaPredicted RBP8.58□□□□□ -1.04
MTHFD1-205ENST00000554057 MEIS3Q99687 375 aa8.58□□□□□ -1.04
MTHFD1-205ENST00000554057 SALL3Q9BXA9 1300 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 IRF6O14896 467 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 WDHD1O75717 1129 aaPredicted RBP8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 ALDH1L1O75891 902 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 CETPP11597 493 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 CTGFP29279 349 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 ATP8B2P98198 1209 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 PPIL2Q13356 520 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 SNAPC2Q13487 334 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 KIF22Q14807 665 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 MTFR1Q15390 333 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 LRRC24Q50LG9 513 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 METTL24Q5JXM2 366 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 FBXO33Q7Z6M2 555 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 ERO1BQ86YB8 467 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 TEKT1Q969V4 418 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 SHISA4Q96DD7 197 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 KAZALD1Q96I82 304 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 ESYT1Q9BSJ8 1104 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 LRRCC1Q9C099 1032 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 BICC1Q9H694 974 aaKnown RBP8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 FOXD4L1Q9NU39 408 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 TMOD2Q9NZR1 351 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 RIPOR2Q9Y4F9 1068 aa8.57□□□□□ -1.04
MTHFD1-205ENST00000554057 RAB11FIP3O75154 756 aa8.56□□□□□ -1.04
MTHFD1-205ENST00000554057 OFD1O75665 1012 aa8.56□□□□□ -1.04
MTHFD1-205ENST00000554057 NBPF7P0C2Y1 421 aaPredicted RBP8.56□□□□□ -1.04
MTHFD1-205ENST00000554057 INPP5BP32019 993 aa8.56□□□□□ -1.04
MTHFD1-205ENST00000554057 ZSCAN23Q3MJ62 389 aa8.56□□□□□ -1.04
MTHFD1-205ENST00000554057 CHRDL2Q6WN34 429 aa8.56□□□□□ -1.04
MTHFD1-205ENST00000554057 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.56□□□□□ -1.04
MTHFD1-205ENST00000554057 TBC1D22AQ8WUA7 517 aa8.56□□□□□ -1.04
MTHFD1-205ENST00000554057 SYAP1Q96A49 352 aaPredicted RBP8.56□□□□□ -1.04
MTHFD1-205ENST00000554057 PDLIM2Q96JY6 352 aa8.56□□□□□ -1.04
MTHFD1-205ENST00000554057 CPA4Q9UI42 421 aa8.56□□□□□ -1.04
MTHFD1-205ENST00000554057 RPAP1Q9BWH6 1393 aaPredicted RBP8.56□□□□□ -1.04
MTHFD1-205ENST00000554057 MROH5Q6ZUA9 1318 aa8.55□□□□□ -1.04
MTHFD1-205ENST00000554057 AK9Q5TCS8 1911 aa8.55□□□□□ -1.04
MTHFD1-205ENST00000554057 SMARCA5O60264 1052 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms