RNA–Protein interactions for RNA: ENST00000554040.5

ATXN3-224, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 592 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-224ENST00000554040 RNFT1Q5M7Z0 435 aa9.16□□□□□ -0.94
ATXN3-224ENST00000554040 DPP8Q6V1X1 898 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-224ENST00000554040 SP8Q8IXZ3 490 aa9.16□□□□□ -0.94
ATXN3-224ENST00000554040 ZNF296Q8WUU4 475 aaPredicted RBP9.16□□□□□ -0.94
ATXN3-224ENST00000554040 NLRP3Q96P20 1036 aa9.16□□□□□ -0.94
ATXN3-224ENST00000554040 SZT2Q5T011 3432 aa9.16□□□□□ -0.94
ATXN3-224ENST00000554040 RIC1Q4ADV7 1423 aa9.15□□□□□ -0.94
ATXN3-224ENST00000554040 BCORQ6W2J9 1755 aa9.15□□□□□ -0.94
ATXN3-224ENST00000554040 MAP3K15Q6ZN16 1313 aa9.15□□□□□ -0.94
ATXN3-224ENST00000554040 YDJCA8MPS7 323 aa9.15□□□□□ -0.94
ATXN3-224ENST00000554040 ZBBXA8MT70 800 aa9.15□□□□□ -0.94
ATXN3-224ENST00000554040 ADM5C9JUS6 153 aa9.15□□□□□ -0.94
ATXN3-224ENST00000554040 U2SURPO15042 1029 aaKnown RBP9.15□□□□□ -0.94
ATXN3-224ENST00000554040 ITGA6P23229 1130 aa9.15□□□□□ -0.94
ATXN3-224ENST00000554040 GPTP24298 496 aa9.15□□□□□ -0.94
ATXN3-224ENST00000554040 FXR1P51114 621 aaKnown RBP eCLIP9.15□□□□□ -0.94
ATXN3-224ENST00000554040 TBC1D10BQ4KMP7 808 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-224ENST00000554040 FBXO46Q6PJ61 603 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-224ENST00000554040 NGEFQ8N5V2 710 aa9.15□□□□□ -0.94
ATXN3-224ENST00000554040 DCPSQ96C86 337 aaKnown RBP9.15□□□□□ -0.94
ATXN3-224ENST00000554040 PHACTR3Q96KR7 559 aa9.15□□□□□ -0.94
ATXN3-224ENST00000554040 CNTNAP3BQ96NU0 1288 aa9.15□□□□□ -0.94
ATXN3-224ENST00000554040 COL25A1Q9BXS0 654 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-224ENST00000554040 CNTNAP3Q9BZ76 1288 aa9.15□□□□□ -0.94
ATXN3-224ENST00000554040 POLMQ9NP87 494 aaPredicted RBP9.15□□□□□ -0.94
ATXN3-224ENST00000554040 UBN2Q6ZU65 1347 aa9.14□□□□□ -0.95
ATXN3-224ENST00000554040 NTSR2O95665 410 aa9.14□□□□□ -0.95
ATXN3-224ENST00000554040 TBC1D8O95759 1140 aa9.14□□□□□ -0.95
ATXN3-224ENST00000554040 EGFRP00533 1210 aa9.14□□□□□ -0.95
ATXN3-224ENST00000554040 GSK3AP49840 483 aa9.14□□□□□ -0.95
ATXN3-224ENST00000554040 NOM1Q5C9Z4 860 aaKnown RBP9.14□□□□□ -0.95
ATXN3-224ENST00000554040 SLC10A5Q5PT55 438 aa9.14□□□□□ -0.95
ATXN3-224ENST00000554040 RASAL3Q86YV0 1011 aa9.14□□□□□ -0.95
ATXN3-224ENST00000554040 ZNF34Q8IZ26 560 aa9.14□□□□□ -0.95
ATXN3-224ENST00000554040 CYLDQ9NQC7 956 aa9.14□□□□□ -0.95
ATXN3-224ENST00000554040 A0A0C4DFX4 3053 aa9.13□□□□□ -0.95
ATXN3-224ENST00000554040 KIAA0100Q14667 2235 aaKnown RBP9.13□□□□□ -0.95
ATXN3-224ENST00000554040 IBTKQ9P2D0 1353 aaPredicted RBP9.13□□□□□ -0.95
ATXN3-224ENST00000554040 ABCC4O15439 1325 aa9.13□□□□□ -0.95
ATXN3-224ENST00000554040 PSMD14O00487 310 aa9.13□□□□□ -0.95
ATXN3-224ENST00000554040 TTLL7Q6ZT98 887 aa9.13□□□□□ -0.95
ATXN3-224ENST00000554040 PPP1R42Q7Z4L9 355 aa9.13□□□□□ -0.95
ATXN3-224ENST00000554040 TIMELESSQ9UNS1 1208 aa9.13□□□□□ -0.95
ATXN3-224ENST00000554040 GPR25O00155 361 aa9.12□□□□□ -0.95
ATXN3-224ENST00000554040 HSPA5P11021 654 aaKnown RBP9.12□□□□□ -0.95
ATXN3-224ENST00000554040 RPS12P25398 132 aaKnown RBP9.12□□□□□ -0.95
ATXN3-224ENST00000554040 FKBP1BP68106 108 aa9.12□□□□□ -0.95
ATXN3-224ENST00000554040 EIF4G2P78344 907 aaKnown RBP eCLIP9.12□□□□□ -0.95
ATXN3-224ENST00000554040 PARP10Q53GL7 1025 aa9.12□□□□□ -0.95
ATXN3-224ENST00000554040 KIF6Q6ZMV9 814 aa9.12□□□□□ -0.95
ATXN3-224ENST00000554040 MCM10Q7L590 875 aa9.12□□□□□ -0.95
ATXN3-224ENST00000554040 VWA5B2Q8N398 1253 aa9.12□□□□□ -0.95
ATXN3-224ENST00000554040 RTF1Q92541 710 aaKnown RBP9.12□□□□□ -0.95
ATXN3-224ENST00000554040 CDCA5Q96FF9 252 aa9.12□□□□□ -0.95
ATXN3-224ENST00000554040 TRIOBPQ9H2D6 2365 aa9.11□□□□□ -0.95
ATXN3-224ENST00000554040 TM4SF4P48230 202 aa9.11□□□□□ -0.95
ATXN3-224ENST00000554040 TAF7Q15545 349 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-224ENST00000554040 WASHC4Q2M389 1173 aa9.11□□□□□ -0.95
ATXN3-224ENST00000554040 INTS3Q68E01 1043 aaKnown RBP9.11□□□□□ -0.95
ATXN3-224ENST00000554040 MTMR14Q8NCE2 650 aa9.11□□□□□ -0.95
ATXN3-224ENST00000554040 UTP14AQ9BVJ6 771 aaKnown RBP9.11□□□□□ -0.95
ATXN3-224ENST00000554040 CUEDC1Q9NWM3 386 aaPredicted RBP9.11□□□□□ -0.95
ATXN3-224ENST00000554040 RRP7AQ9Y3A4 280 aaKnown RBP9.11□□□□□ -0.95
ATXN3-224ENST00000554040 PCDHB9Q9Y5E1 797 aa9.11□□□□□ -0.95
ATXN3-224ENST00000554040 BRCA2P51587 3418 aa9.11□□□□□ -0.95
ATXN3-224ENST00000554040 CEP290O15078 2479 aa9.1□□□□□ -0.95
ATXN3-224ENST00000554040 FKTNO75072 461 aa9.1□□□□□ -0.95
ATXN3-224ENST00000554040 PRKAR2BP31323 418 aa9.1□□□□□ -0.95
ATXN3-224ENST00000554040 GRAPQ13588 217 aa9.1□□□□□ -0.95
ATXN3-224ENST00000554040 DCTN1Q14203 1278 aa9.1□□□□□ -0.95
ATXN3-224ENST00000554040 KIF4BQ2VIQ3 1234 aa9.1□□□□□ -0.95
ATXN3-224ENST00000554040 DDX46Q7L014 1031 aaKnown RBP9.1□□□□□ -0.95
ATXN3-224ENST00000554040 GRAPLQ8TC17 118 aaPredicted RBP9.1□□□□□ -0.95
ATXN3-224ENST00000554040 KCNQ5Q9NR82 932 aa9.1□□□□□ -0.95
ATXN3-224ENST00000554040 MIS18AQ9NYP9 233 aa9.1□□□□□ -0.95
ATXN3-224ENST00000554040 GGA3Q9NZ52 723 aa9.1□□□□□ -0.95
ATXN3-224ENST00000554040 AKAP11Q9UKA4 1901 aa9.09□□□□□ -0.95
ATXN3-224ENST00000554040 CENPFP49454 3210 aa9.09□□□□□ -0.95
ATXN3-224ENST00000554040 HTATSF1O43719 755 aaKnown RBP9.09□□□□□ -0.95
ATXN3-224ENST00000554040 VIL1P09327 827 aaKnown RBP9.09□□□□□ -0.95
ATXN3-224ENST00000554040 MYL6BP14649 208 aa9.09□□□□□ -0.95
ATXN3-224ENST00000554040 RNF144AP50876 292 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-224ENST00000554040 CC2D1BQ5T0F9 858 aaKnown RBP9.09□□□□□ -0.95
ATXN3-224ENST00000554040 ZNF385CQ66K41 422 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-224ENST00000554040 TMC4Q7Z404 712 aa9.09□□□□□ -0.95
ATXN3-224ENST00000554040 CFHR5Q9BXR6 569 aa9.09□□□□□ -0.95
ATXN3-224ENST00000554040 DBNDD1Q9H9R9 158 aa9.09□□□□□ -0.95
ATXN3-224ENST00000554040 CUL9Q8IWT3 2517 aa9.09□□□□□ -0.95
ATXN3-224ENST00000554040 SIPA1L3O60292 1781 aaPredicted RBP9.09□□□□□ -0.95
ATXN3-224ENST00000554040 ASTN2O75129 1339 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-224ENST00000554040 POLR2AP24928 1970 aaKnown RBP9.08□□□□□ -0.96
ATXN3-224ENST00000554040 UBE2Q2LH0YL09 131 aa9.08□□□□□ -0.96
ATXN3-224ENST00000554040 DLL1O00548 723 aa9.08□□□□□ -0.96
ATXN3-224ENST00000554040 SLURP2P0DP57 97 aa9.08□□□□□ -0.96
ATXN3-224ENST00000554040 HCLS1P14317 486 aaPredicted RBP9.08□□□□□ -0.96
ATXN3-224ENST00000554040 ERVK-9P63128 1117 aa9.08□□□□□ -0.96
ATXN3-224ENST00000554040 MOB2Q70IA6 237 aa9.08□□□□□ -0.96
ATXN3-224ENST00000554040 LYSMD3Q7Z3D4 306 aa9.08□□□□□ -0.96
ATXN3-224ENST00000554040 WHAMMQ8TF30 809 aa9.08□□□□□ -0.96
ATXN3-224ENST00000554040 R3HDMLQ9H3Y0 253 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms