RNA–Protein interactions for RNA: ENST00000553998.5

ABCD4-220, Transcript of ATP binding cassette subfamily D member 4, humanhuman

TSL 3

Gene ABCD4, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4-220ENST00000553998 PRRT2Q7Z6L0 340 aaPredicted RBP9.66□□□□□ -0.86
ABCD4-220ENST00000553998 ANKLE1Q8NAG6 615 aa9.66□□□□□ -0.86
ABCD4-220ENST00000553998 SUCLG2Q96I99 432 aa9.66□□□□□ -0.86
ABCD4-220ENST00000553998 C9orf78Q9NZ63 289 aaPredicted RBP9.66□□□□□ -0.86
ABCD4-220ENST00000553998 IQSEC3Q9UPP2 1182 aaPredicted RBP9.66□□□□□ -0.86
ABCD4-220ENST00000553998 STXBP5LQ9Y2K9 1186 aa9.66□□□□□ -0.86
ABCD4-220ENST00000553998 VCANP13611 3396 aa9.66□□□□□ -0.86
ABCD4-220ENST00000553998 SPTBN5Q9NRC6 3674 aaKnown RBP9.66□□□□□ -0.86
ABCD4-220ENST00000553998 ZSWIM8A7E2V4 1837 aa9.66□□□□□ -0.86
ABCD4-220ENST00000553998 ATRNL1Q5VV63 1379 aa9.65□□□□□ -0.86
ABCD4-220ENST00000553998 FRAT2O75474 233 aaPredicted RBP9.65□□□□□ -0.86
ABCD4-220ENST00000553998 ECM2O94769 699 aaPredicted RBP9.65□□□□□ -0.86
ABCD4-220ENST00000553998 NBPF7P0C2Y1 421 aaPredicted RBP9.65□□□□□ -0.86
ABCD4-220ENST00000553998 NFIAQ12857 509 aa9.65□□□□□ -0.86
ABCD4-220ENST00000553998 LRRC24Q50LG9 513 aa9.65□□□□□ -0.86
ABCD4-220ENST00000553998 CDC42EP5Q6NZY7 148 aa9.65□□□□□ -0.86
ABCD4-220ENST00000553998 NECAB2Q7Z6G3 386 aa9.65□□□□□ -0.86
ABCD4-220ENST00000553998 WDR66Q8TBY9 1149 aa9.65□□□□□ -0.86
ABCD4-220ENST00000553998 ARHGAP45Q92619 1136 aa9.65□□□□□ -0.86
ABCD4-220ENST00000553998 PAWRQ96IZ0 340 aaKnown RBP9.65□□□□□ -0.86
ABCD4-220ENST00000553998 DEFB118Q96PH6 123 aa9.65□□□□□ -0.86
ABCD4-220ENST00000553998 FAM198AQ9UFP1 575 aa9.65□□□□□ -0.86
ABCD4-220ENST00000553998 AFG3L2Q9Y4W6 797 aa9.65□□□□□ -0.86
ABCD4-220ENST00000553998 IPO8O15397 1037 aaKnown RBP9.64□□□□□ -0.87
ABCD4-220ENST00000553998 ELNP15502 786 aa9.64□□□□□ -0.87
ABCD4-220ENST00000553998 PTPRAP18433 802 aa9.64□□□□□ -0.87
ABCD4-220ENST00000553998 METTL24Q5JXM2 366 aa9.64□□□□□ -0.87
ABCD4-220ENST00000553998 SCYL3Q8IZE3 742 aa9.64□□□□□ -0.87
ABCD4-220ENST00000553998 DEFB123Q8N688 67 aa9.64□□□□□ -0.87
ABCD4-220ENST00000553998 ANKRD44Q8N8A2 993 aa9.64□□□□□ -0.87
ABCD4-220ENST00000553998 IDI2Q9BXS1 227 aa9.64□□□□□ -0.87
ABCD4-220ENST00000553998 API5Q9BZZ5 524 aaKnown RBP9.64□□□□□ -0.87
ABCD4-220ENST00000553998 SRCIN1Q9C0H9 1055 aa9.64□□□□□ -0.87
ABCD4-220ENST00000553998 MTMR10Q9NXD2 777 aa9.64□□□□□ -0.87
ABCD4-220ENST00000553998 DAGLAQ9Y4D2 1042 aa9.64□□□□□ -0.87
ABCD4-220ENST00000553998 ZHX2Q9Y6X8 837 aa9.64□□□□□ -0.87
ABCD4-220ENST00000553998 TNPO2O14787 897 aaKnown RBP9.63□□□□□ -0.87
ABCD4-220ENST00000553998 ENTPD3O75355 529 aa9.63□□□□□ -0.87
ABCD4-220ENST00000553998 BICC1Q9H694 974 aaKnown RBP9.63□□□□□ -0.87
ABCD4-220ENST00000553998 RCAN3Q9UKA8 241 aa9.63□□□□□ -0.87
ABCD4-220ENST00000553998 SALL1Q9NSC2 1324 aa9.62□□□□□ -0.87
ABCD4-220ENST00000553998 CTNND1O60716 968 aaKnown RBP9.62□□□□□ -0.87
ABCD4-220ENST00000553998 IFIT1P09914 478 aaKnown RBP9.62□□□□□ -0.87
ABCD4-220ENST00000553998 TCP10Q12799 353 aa9.62□□□□□ -0.87
ABCD4-220ENST00000553998 PUM3Q15397 648 aaKnown RBP9.62□□□□□ -0.87
ABCD4-220ENST00000553998 FAM110CQ1W6H9 321 aa9.62□□□□□ -0.87
ABCD4-220ENST00000553998 ZFPM1Q8IX07 1006 aa9.62□□□□□ -0.87
ABCD4-220ENST00000553998 TDHQ8IZJ6 230 aa9.62□□□□□ -0.87
ABCD4-220ENST00000553998 DIS3LQ8TF46 1054 aaKnown RBP9.62□□□□□ -0.87
ABCD4-220ENST00000553998 LPIN2Q92539 896 aa9.62□□□□□ -0.87
ABCD4-220ENST00000553998 COA7Q96BR5 231 aa9.62□□□□□ -0.87
ABCD4-220ENST00000553998 XRN2Q9H0D6 950 aaKnown RBP eCLIP9.62□□□□□ -0.87
ABCD4-220ENST00000553998 USP40Q9NVE5 1235 aa9.62□□□□□ -0.87
ABCD4-220ENST00000553998 GJD2Q9UKL4 321 aa9.62□□□□□ -0.87
ABCD4-220ENST00000553998 NOB1Q9ULX3 412 aaKnown RBP9.62□□□□□ -0.87
ABCD4-220ENST00000553998 RPTORQ8N122 1335 aa9.61□□□□□ -0.87
ABCD4-220ENST00000553998 BCAR3O75815 825 aa9.61□□□□□ -0.87
ABCD4-220ENST00000553998 DIXDC1Q155Q3 683 aa9.61□□□□□ -0.87
ABCD4-220ENST00000553998 FAM109BQ6ICB4 259 aaPredicted RBP9.61□□□□□ -0.87
ABCD4-220ENST00000553998 Q7L0L9 218 aa9.61□□□□□ -0.87
ABCD4-220ENST00000553998 SH3BP5LQ7L8J4 393 aa9.61□□□□□ -0.87
ABCD4-220ENST00000553998 COL25A1Q9BXS0 654 aaPredicted RBP9.61□□□□□ -0.87
ABCD4-220ENST00000553998 NBPF3Q9H094 633 aa9.61□□□□□ -0.87
ABCD4-220ENST00000553998 PICK1Q9NRD5 415 aa9.61□□□□□ -0.87
ABCD4-220ENST00000553998 OGDHLQ9ULD0 1010 aa9.61□□□□□ -0.87
ABCD4-220ENST00000553998 AGTPBP1Q9UPW5 1226 aa9.61□□□□□ -0.87
ABCD4-220ENST00000553998 MYH13Q9UKX3 1938 aa9.6□□□□□ -0.87
ABCD4-220ENST00000553998 POTEB2H3BUK9 544 aa9.6□□□□□ -0.87
ABCD4-220ENST00000553998 TBC1D12O60347 775 aa9.6□□□□□ -0.87
ABCD4-220ENST00000553998 HMGCRP04035 888 aa9.6□□□□□ -0.87
ABCD4-220ENST00000553998 PRDX5P30044 214 aa9.6□□□□□ -0.87
ABCD4-220ENST00000553998 MAGEA10P43363 369 aaPredicted RBP9.6□□□□□ -0.87
ABCD4-220ENST00000553998 RFX5P48382 616 aaPredicted RBP9.6□□□□□ -0.87
ABCD4-220ENST00000553998 MAP3K21Q5TCX8 1036 aa9.6□□□□□ -0.87
ABCD4-220ENST00000553998 ZKSCAN2Q63HK3 967 aa9.6□□□□□ -0.87
ABCD4-220ENST00000553998 SLC4A10Q6U841 1118 aa9.6□□□□□ -0.87
ABCD4-220ENST00000553998 ATF7IPQ6VMQ6 1270 aa9.6□□□□□ -0.87
ABCD4-220ENST00000553998 PROCA1Q8NCQ7 364 aaPredicted RBP9.6□□□□□ -0.87
ABCD4-220ENST00000553998 SMCR8Q8TEV9 937 aaPredicted RBP9.6□□□□□ -0.87
ABCD4-220ENST00000553998 FAM163AQ96GL9 167 aaPredicted RBP9.6□□□□□ -0.87
ABCD4-220ENST00000553998 RFX7Q2KHR2 1363 aa9.6□□□□□ -0.87
ABCD4-220ENST00000553998 GAKO14976 1311 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 EYA2O00167 538 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 SEMA3EO15041 775 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 NPM3O75607 178 aaKnown RBP9.59□□□□□ -0.87
ABCD4-220ENST00000553998 LDHBP07195 334 aaKnown RBP9.59□□□□□ -0.87
ABCD4-220ENST00000553998 MS4A1P11836 297 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 COL6A1P12109 1028 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 SLC5A1P13866 664 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 GCLCP48506 637 aaPredicted RBP9.59□□□□□ -0.87
ABCD4-220ENST00000553998 RGS3P49796 1198 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 GADL1Q6ZQY3 521 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 ATG9AQ7Z3C6 839 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 C7orf61Q8IZ16 206 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 ANKRD13CQ8N6S4 541 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 KLHDC4Q8TBB5 520 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 FRAT1Q92837 279 aaPredicted RBP9.59□□□□□ -0.87
ABCD4-220ENST00000553998 C11orf49Q9H6J7 331 aa9.59□□□□□ -0.87
ABCD4-220ENST00000553998 HMX1Q9NP08 348 aaPredicted RBP9.59□□□□□ -0.87
ABCD4-220ENST00000553998 FBXO3Q9UK99 471 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms