RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 CTDSPL2Q05D32 466 aa16.81■□□□□ 0.28
PRKCH-206ENST00000553830 NFIAQ12857 509 aa16.81■□□□□ 0.28
PRKCH-206ENST00000553830 IMMTQ16891 758 aaKnown RBP16.81■□□□□ 0.28
PRKCH-206ENST00000553830 RNF20Q5VTR2 975 aa16.81■□□□□ 0.28
PRKCH-206ENST00000553830 ATP8A2Q9NTI2 1148 aa16.81■□□□□ 0.28
PRKCH-206ENST00000553830 SCAF8Q9UPN6 1271 aaKnown RBP16.81■□□□□ 0.28
PRKCH-206ENST00000553830 TAF6LQ9Y6J9 622 aa16.81■□□□□ 0.28
PRKCH-206ENST00000553830 RPAP1Q9BWH6 1393 aaPredicted RBP16.8■□□□□ 0.28
PRKCH-206ENST00000553830 ZC3H4Q9UPT8 1303 aaKnown RBP16.8■□□□□ 0.28
PRKCH-206ENST00000553830 GLTPD2A6NH11 291 aa16.8■□□□□ 0.28
PRKCH-206ENST00000553830 USP17L12C9JPN9 530 aa16.8■□□□□ 0.28
PRKCH-206ENST00000553830 USP17L21D6R901 530 aa16.8■□□□□ 0.28
PRKCH-206ENST00000553830 SMIM22K7EJ46 135 aa16.8■□□□□ 0.28
PRKCH-206ENST00000553830 WNT10BO00744 389 aa16.8■□□□□ 0.28
PRKCH-206ENST00000553830 EVX2Q03828 476 aa16.8■□□□□ 0.28
PRKCH-206ENST00000553830 NECTIN1Q15223 517 aa16.8■□□□□ 0.28
PRKCH-206ENST00000553830 ALX1Q15699 326 aa16.8■□□□□ 0.28
PRKCH-206ENST00000553830 RASEFQ8IZ41 740 aa16.8■□□□□ 0.28
PRKCH-206ENST00000553830 SCN4AP35499 1836 aa16.8■□□□□ 0.28
PRKCH-206ENST00000553830 SRCAPQ6ZRS2 3230 aa16.79■□□□□ 0.28
PRKCH-206ENST00000553830 ZNF213O14771 459 aa16.79■□□□□ 0.28
PRKCH-206ENST00000553830 CYP21A2P08686 494 aa16.79■□□□□ 0.28
PRKCH-206ENST00000553830 ZKSCAN1P17029 563 aaPredicted RBP16.79■□□□□ 0.28
PRKCH-206ENST00000553830 SPDYE2Q495Y8 402 aa16.79■□□□□ 0.28
PRKCH-206ENST00000553830 CTR9Q6PD62 1173 aa16.79■□□□□ 0.28
PRKCH-206ENST00000553830 ZSCAN29Q8IWY8 852 aaPredicted RBP16.79■□□□□ 0.28
PRKCH-206ENST00000553830 AMOTL1Q8IY63 956 aa16.79■□□□□ 0.28
PRKCH-206ENST00000553830 MTMR14Q8NCE2 650 aa16.79■□□□□ 0.28
PRKCH-206ENST00000553830 ZNF526Q8TF50 670 aaPredicted RBP16.79■□□□□ 0.28
PRKCH-206ENST00000553830 ZBED3Q96IU2 234 aaPredicted RBP16.79■□□□□ 0.28
PRKCH-206ENST00000553830 HACL1Q9UJ83 578 aa16.79■□□□□ 0.28
PRKCH-206ENST00000553830 SNX14Q9Y5W7 946 aa16.79■□□□□ 0.28
PRKCH-206ENST00000553830 ZMYM6O95789 1325 aa16.78■□□□□ 0.28
PRKCH-206ENST00000553830 EPB41L2O43491 1005 aaKnown RBP16.78■□□□□ 0.28
PRKCH-206ENST00000553830 RBM25P49756 843 aaKnown RBP16.78■□□□□ 0.28
PRKCH-206ENST00000553830 PPARAQ07869 468 aa16.78■□□□□ 0.28
PRKCH-206ENST00000553830 TBC1D10CQ8IV04 446 aa16.78■□□□□ 0.28
PRKCH-206ENST00000553830 ZFPM1Q8IX07 1006 aa16.78■□□□□ 0.28
PRKCH-206ENST00000553830 OSBPL5Q9H0X9 879 aaPredicted RBP16.78■□□□□ 0.28
PRKCH-206ENST00000553830 TOMM22Q9NS69 142 aa16.78■□□□□ 0.28
PRKCH-206ENST00000553830 ARPP21Q9UBL0 812 aaPredicted RBP16.78■□□□□ 0.28
PRKCH-206ENST00000553830 WDR90Q96KV7 1748 aa16.78■□□□□ 0.28
PRKCH-206ENST00000553830 MMP14P50281 582 aa16.77■□□□□ 0.28
PRKCH-206ENST00000553830 GIMAP6Q6P9H5 292 aa16.77■□□□□ 0.28
PRKCH-206ENST00000553830 JAKMIP1Q96N16 626 aaKnown RBP16.77■□□□□ 0.28
PRKCH-206ENST00000553830 NBPF3Q9H094 633 aa16.77■□□□□ 0.28
PRKCH-206ENST00000553830 INCENPQ9NQS7 918 aa16.77■□□□□ 0.28
PRKCH-206ENST00000553830 ADARB2Q9NS39 739 aaKnown RBP16.77■□□□□ 0.28
PRKCH-206ENST00000553830 FAM198AQ9UFP1 575 aa16.77■□□□□ 0.28
PRKCH-206ENST00000553830 MKRN1Q9UHC7 482 aaKnown RBP16.77■□□□□ 0.28
PRKCH-206ENST00000553830 SIPA1L1O43166 1804 aa16.77■□□□□ 0.27
PRKCH-206ENST00000553830 EPHX2P34913 555 aa16.76■□□□□ 0.27
PRKCH-206ENST00000553830 HIRAP54198 1017 aaPredicted RBP16.76■□□□□ 0.27
PRKCH-206ENST00000553830 ADCK5Q3MIX3 580 aa16.76■□□□□ 0.27
PRKCH-206ENST00000553830 EAPPQ56P03 285 aaPredicted RBP16.76■□□□□ 0.27
PRKCH-206ENST00000553830 RRP12Q5JTH9 1297 aaKnown RBP16.76■□□□□ 0.27
PRKCH-206ENST00000553830 ANGEL2Q5VTE6 544 aaKnown RBP16.76■□□□□ 0.27
PRKCH-206ENST00000553830 STOX1Q6ZVD7 989 aa16.76■□□□□ 0.27
PRKCH-206ENST00000553830 DYNLL2Q96FJ2 89 aa16.76■□□□□ 0.27
PRKCH-206ENST00000553830 L3MBTL3Q96JM7 780 aaPredicted RBP16.76■□□□□ 0.27
PRKCH-206ENST00000553830 IDI2Q9BXS1 227 aa16.76■□□□□ 0.27
PRKCH-206ENST00000553830 E7EWF7 191 aa16.75■□□□□ 0.27
PRKCH-206ENST00000553830 CPA1P15085 419 aa16.75■□□□□ 0.27
PRKCH-206ENST00000553830 GGA3Q9NZ52 723 aa16.75■□□□□ 0.27
PRKCH-206ENST00000553830 CNTNAP1P78357 1384 aa16.75■□□□□ 0.27
PRKCH-206ENST00000553830 NEDD4P46934 1319 aa16.74■□□□□ 0.27
PRKCH-206ENST00000553830 DDTLA6NHG4 134 aaPredicted RBP16.74■□□□□ 0.27
PRKCH-206ENST00000553830 PRDM1O75626 825 aa16.74■□□□□ 0.27
PRKCH-206ENST00000553830 HLA-DOAP06340 250 aa16.74■□□□□ 0.27
PRKCH-206ENST00000553830 SLC3A2P08195 630 aaKnown RBP16.74■□□□□ 0.27
PRKCH-206ENST00000553830 CASTP20810 708 aaKnown RBP16.74■□□□□ 0.27
PRKCH-206ENST00000553830 PLCD1P51178 756 aa16.74■□□□□ 0.27
PRKCH-206ENST00000553830 SBK1Q52WX2 424 aa16.74■□□□□ 0.27
PRKCH-206ENST00000553830 C12orf60Q5U649 245 aa16.74■□□□□ 0.27
PRKCH-206ENST00000553830 KCNB2Q92953 911 aa16.74■□□□□ 0.27
PRKCH-206ENST00000553830 UPF3BQ9BZI7 483 aaKnown RBP16.74■□□□□ 0.27
PRKCH-206ENST00000553830 TMEM39BQ9GZU3 492 aa16.74■□□□□ 0.27
PRKCH-206ENST00000553830 RRAGCQ9HB90 399 aa16.74■□□□□ 0.27
PRKCH-206ENST00000553830 TACC3Q9Y6A5 838 aa16.74■□□□□ 0.27
PRKCH-206ENST00000553830 IQCA1LA6NCM1 817 aa16.73■□□□□ 0.27
PRKCH-206ENST00000553830 ENTPD3O75355 529 aa16.73■□□□□ 0.27
PRKCH-206ENST00000553830 SLURP2P0DP57 97 aa16.73■□□□□ 0.27
PRKCH-206ENST00000553830 TNNI2P48788 182 aa16.73■□□□□ 0.27
PRKCH-206ENST00000553830 ANAPC15P60006 121 aa16.73■□□□□ 0.27
PRKCH-206ENST00000553830 KRT32Q14532 448 aa16.73■□□□□ 0.27
PRKCH-206ENST00000553830 AKNAD1Q5T1N1 836 aa16.73■□□□□ 0.27
PRKCH-206ENST00000553830 MFSD6Q6ZSS7 791 aa16.73■□□□□ 0.27
PRKCH-206ENST00000553830 SH3BP5LQ7L8J4 393 aa16.73■□□□□ 0.27
PRKCH-206ENST00000553830 RALYLQ86SE5 291 aaKnown RBP16.73■□□□□ 0.27
PRKCH-206ENST00000553830 SLC44A5Q8NCS7 719 aa16.73■□□□□ 0.27
PRKCH-206ENST00000553830 KIF2CQ99661 725 aa16.73■□□□□ 0.27
PRKCH-206ENST00000553830 TRIM34Q9BYJ4 488 aa16.73■□□□□ 0.27
PRKCH-206ENST00000553830 RBM19Q9Y4C8 960 aaKnown RBP16.73■□□□□ 0.27
PRKCH-206ENST00000553830 FAM196BA6NMK8 535 aa16.72■□□□□ 0.27
PRKCH-206ENST00000553830 TRDNQ13061 729 aa16.72■□□□□ 0.27
PRKCH-206ENST00000553830 TNFAIP1Q13829 316 aa16.72■□□□□ 0.27
PRKCH-206ENST00000553830 COL9A3Q14050 684 aaPredicted RBP16.72■□□□□ 0.27
PRKCH-206ENST00000553830 RASA3Q14644 834 aa16.72■□□□□ 0.27
PRKCH-206ENST00000553830 TTC6Q86TZ1 520 aa16.72■□□□□ 0.27
PRKCH-206ENST00000553830 CDAN1Q8IWY9 1227 aa16.72■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms