RNA–Protein interactions for RNA: ENST00000553686.5

ATXN3-223, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 869 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-223ENST00000553686 IL22RA1Q8N6P7 574 aa8.95□□□□□ -0.98
ATXN3-223ENST00000553686 CEP120Q8N960 986 aa8.95□□□□□ -0.98
ATXN3-223ENST00000553686 SALL4Q9UJQ4 1053 aa8.95□□□□□ -0.98
ATXN3-223ENST00000553686 TRIM33Q9UPN9 1127 aa8.95□□□□□ -0.98
ATXN3-223ENST00000553686 ROBO2Q9HCK4 1378 aa8.95□□□□□ -0.98
ATXN3-223ENST00000553686 HFM1A2PYH4 1435 aa8.95□□□□□ -0.98
ATXN3-223ENST00000553686 TNFRSF21O75509 655 aa8.94□□□□□ -0.98
ATXN3-223ENST00000553686 ARHGAP4P98171 946 aa8.94□□□□□ -0.98
ATXN3-223ENST00000553686 ATP11AP98196 1134 aa8.94□□□□□ -0.98
ATXN3-223ENST00000553686 GJD3Q8N144 294 aa8.94□□□□□ -0.98
ATXN3-223ENST00000553686 RASSF4Q9H2L5 321 aa8.94□□□□□ -0.98
ATXN3-223ENST00000553686 CCDC144AA2RUR9 1427 aa8.94□□□□□ -0.98
ATXN3-223ENST00000553686 PHACTR2O75167 634 aa8.93□□□□□ -0.98
ATXN3-223ENST00000553686 SMNDC1O75940 238 aaKnown RBP eCLIP8.93□□□□□ -0.98
ATXN3-223ENST00000553686 ZBTB7AO95365 584 aa8.93□□□□□ -0.98
ATXN3-223ENST00000553686 ELNP15502 786 aa8.93□□□□□ -0.98
ATXN3-223ENST00000553686 FMR1NBQ8N0W7 255 aaPredicted RBP8.93□□□□□ -0.98
ATXN3-223ENST00000553686 DTWD1Q8N5C7 304 aa8.93□□□□□ -0.98
ATXN3-223ENST00000553686 NACC1Q96RE7 527 aa8.93□□□□□ -0.98
ATXN3-223ENST00000553686 PBX4Q9BYU1 374 aa8.93□□□□□ -0.98
ATXN3-223ENST00000553686 CHRDQ9H2X0 955 aa8.93□□□□□ -0.98
ATXN3-223ENST00000553686 ARHGEF10O15013 1369 aa8.93□□□□□ -0.98
ATXN3-223ENST00000553686 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.93□□□□□ -0.98
ATXN3-223ENST00000553686 XRN1Q8IZH2 1706 aaKnown RBP8.92□□□□□ -0.98
ATXN3-223ENST00000553686 DAPK1P53355 1430 aa8.92□□□□□ -0.98
ATXN3-223ENST00000553686 PROCP04070 461 aa8.92□□□□□ -0.98
ATXN3-223ENST00000553686 FBXO11Q86XK2 927 aa8.92□□□□□ -0.98
ATXN3-223ENST00000553686 CACTIN-AS1Q8N1I8 211 aa8.92□□□□□ -0.98
ATXN3-223ENST00000553686 FOXD3Q9UJU5 478 aaPredicted RBP8.92□□□□□ -0.98
ATXN3-223ENST00000553686 ADGRB2O60241 1585 aa8.91□□□□□ -0.98
ATXN3-223ENST00000553686 ANKRD50Q9ULJ7 1429 aa8.91□□□□□ -0.98
ATXN3-223ENST00000553686 C9orf172C9J069 976 aa8.91□□□□□ -0.98
ATXN3-223ENST00000553686 PLSCR1O15162 318 aa8.91□□□□□ -0.98
ATXN3-223ENST00000553686 SELPP16109 830 aa8.91□□□□□ -0.98
ATXN3-223ENST00000553686 POP1Q99575 1024 aaKnown RBP8.91□□□□□ -0.98
ATXN3-223ENST00000553686 LACRTQ9GZZ8 138 aa8.91□□□□□ -0.98
ATXN3-223ENST00000553686 EREGO14944 169 aa8.9□□□□□ -0.98
ATXN3-223ENST00000553686 NDUFB5O43674 189 aa8.9□□□□□ -0.98
ATXN3-223ENST00000553686 GATA4P43694 442 aa8.9□□□□□ -0.98
ATXN3-223ENST00000553686 SHISA2Q6UWI4 295 aa8.9□□□□□ -0.98
ATXN3-223ENST00000553686 SNX29Q8TEQ0 813 aa8.9□□□□□ -0.98
ATXN3-223ENST00000553686 ZFYVE28Q9HCC9 887 aa8.9□□□□□ -0.98
ATXN3-223ENST00000553686 GNEQ9Y223 722 aaKnown RBP8.9□□□□□ -0.98
ATXN3-223ENST00000553686 PPME1Q9Y570 386 aa8.9□□□□□ -0.98
ATXN3-223ENST00000553686 SBNO1A3KN83 1393 aa8.89□□□□□ -0.99
ATXN3-223ENST00000553686 SPATA31A1Q5TZJ5 1347 aa8.89□□□□□ -0.99
ATXN3-223ENST00000553686 SOWAHDA6NJG2 315 aa8.89□□□□□ -0.99
ATXN3-223ENST00000553686 DEAF1O75398 565 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-223ENST00000553686 TRPA1O75762 1119 aa8.89□□□□□ -0.99
ATXN3-223ENST00000553686 PRELPP51888 382 aa8.89□□□□□ -0.99
ATXN3-223ENST00000553686 LENG1Q96BZ8 264 aaPredicted RBP8.89□□□□□ -0.99
ATXN3-223ENST00000553686 MTFR1LQ9H019 292 aa8.89□□□□□ -0.99
ATXN3-223ENST00000553686 MUC3BQ9H195 1237 aa8.89□□□□□ -0.99
ATXN3-223ENST00000553686 DZANK1Q9NVP4 752 aa8.89□□□□□ -0.99
ATXN3-223ENST00000553686 TNS3Q68CZ2 1445 aa8.88□□□□□ -0.99
ATXN3-223ENST00000553686 UTRNP46939 3433 aa8.88□□□□□ -0.99
ATXN3-223ENST00000553686 ACPPP15309 386 aa8.88□□□□□ -0.99
ATXN3-223ENST00000553686 CDC27P30260 824 aa8.88□□□□□ -0.99
ATXN3-223ENST00000553686 TMC1Q8TDI8 760 aa8.88□□□□□ -0.99
ATXN3-223ENST00000553686 CITED4Q96RK1 184 aa8.88□□□□□ -0.99
ATXN3-223ENST00000553686 PRDM11Q9NQV5 511 aa8.88□□□□□ -0.99
ATXN3-223ENST00000553686 STK32BQ9NY57 414 aa8.88□□□□□ -0.99
ATXN3-223ENST00000553686 BIN2Q9UBW5 565 aaPredicted RBP8.88□□□□□ -0.99
ATXN3-223ENST00000553686 BRWD3Q6RI45 1802 aa8.88□□□□□ -0.99
ATXN3-223ENST00000553686 PTPN23Q9H3S7 1636 aa8.87□□□□□ -0.99
ATXN3-223ENST00000553686 LINC01387J3KSC0 135 aa8.87□□□□□ -0.99
ATXN3-223ENST00000553686 NFKBIEO00221 500 aa8.87□□□□□ -0.99
ATXN3-223ENST00000553686 GRIN3BO60391 1043 aa8.87□□□□□ -0.99
ATXN3-223ENST00000553686 EDN3P14138 238 aa8.87□□□□□ -0.99
ATXN3-223ENST00000553686 PTPRAP18433 802 aa8.87□□□□□ -0.99
ATXN3-223ENST00000553686 CDC25BP30305 580 aa8.87□□□□□ -0.99
ATXN3-223ENST00000553686 NRG1Q02297 640 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-223ENST00000553686 ADAMTSL4Q6UY14 1074 aa8.87□□□□□ -0.99
ATXN3-223ENST00000553686 OSMRQ99650 979 aa8.87□□□□□ -0.99
ATXN3-223ENST00000553686 TRAIPQ9BWF2 469 aa8.87□□□□□ -0.99
ATXN3-223ENST00000553686 SH2B1Q9NRF2 756 aaPredicted RBP8.87□□□□□ -0.99
ATXN3-223ENST00000553686 RGPD1P0DJD0 1748 aa8.87□□□□□ -0.99
ATXN3-223ENST00000553686 PRAG1Q86YV5 1406 aa8.87□□□□□ -0.99
ATXN3-223ENST00000553686 USP32Q8NFA0 1604 aa8.87□□□□□ -0.99
ATXN3-223ENST00000553686 GCC2Q8IWJ2 1684 aa8.86□□□□□ -0.99
ATXN3-223ENST00000553686 FAM177BA6PVY3 158 aa8.86□□□□□ -0.99
ATXN3-223ENST00000553686 PDE2AO00408 941 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-223ENST00000553686 POLR3DP05423 398 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-223ENST00000553686 EVA1CP58658 441 aa8.86□□□□□ -0.99
ATXN3-223ENST00000553686 DOC2BQ14184 412 aa8.86□□□□□ -0.99
ATXN3-223ENST00000553686 SETDB1Q15047 1291 aa8.86□□□□□ -0.99
ATXN3-223ENST00000553686 IGF2-ASQ6U949 168 aa8.86□□□□□ -0.99
ATXN3-223ENST00000553686 WAPLQ7Z5K2 1190 aa8.86□□□□□ -0.99
ATXN3-223ENST00000553686 PDGFDQ9GZP0 370 aaPredicted RBP8.86□□□□□ -0.99
ATXN3-223ENST00000553686 ADAM19Q9H013 955 aa8.86□□□□□ -0.99
ATXN3-223ENST00000553686 RPGRIP1LQ68CZ1 1315 aa8.85□□□□□ -0.99
ATXN3-223ENST00000553686 DLL1O00548 723 aa8.85□□□□□ -0.99
ATXN3-223ENST00000553686 NEFLP07196 543 aa8.85□□□□□ -0.99
ATXN3-223ENST00000553686 ADGRE1Q14246 886 aa8.85□□□□□ -0.99
ATXN3-223ENST00000553686 MAP4K3Q8IVH8 894 aa8.85□□□□□ -0.99
ATXN3-223ENST00000553686 HHIPQ96QV1 700 aa8.85□□□□□ -0.99
ATXN3-223ENST00000553686 USP35Q9P2H5 1018 aa8.85□□□□□ -0.99
ATXN3-223ENST00000553686 NAIPQ13075 1403 aa8.85□□□□□ -0.99
ATXN3-223ENST00000553686 RRBP1Q9P2E9 1410 aaKnown RBP8.85□□□□□ -0.99
ATXN3-223ENST00000553686 NUP155O75694 1391 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms