RNA–Protein interactions for RNA: ENST00000553609.5

NEDD1-205, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 3

Gene NEDD1, Length 581 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-205ENST00000553609 UNC93B1Q9H1C4 597 aa17.74■□□□□ 0.43
NEDD1-205ENST00000553609 CIAO1O76071 339 aa17.73■□□□□ 0.43
NEDD1-205ENST00000553609 PTPRAP18433 802 aa17.73■□□□□ 0.43
NEDD1-205ENST00000553609 ZEB1P37275 1124 aaPredicted RBP17.73■□□□□ 0.43
NEDD1-205ENST00000553609 PHKA1P46020 1223 aa17.73■□□□□ 0.43
NEDD1-205ENST00000553609 FAM9BQ8IZU0 186 aa17.73■□□□□ 0.43
NEDD1-205ENST00000553609 FBXO3Q9UK99 471 aa17.73■□□□□ 0.43
NEDD1-205ENST00000553609 AFG3L2Q9Y4W6 797 aa17.73■□□□□ 0.43
NEDD1-205ENST00000553609 ZHX2Q9Y6X8 837 aa17.73■□□□□ 0.43
NEDD1-205ENST00000553609 COL6A3P12111 3177 aa17.73■□□□□ 0.43
NEDD1-205ENST00000553609 PTPRFP10586 1907 aa17.72■□□□□ 0.43
NEDD1-205ENST00000553609 ENTPD3O75355 529 aa17.72■□□□□ 0.43
NEDD1-205ENST00000553609 FARP2O94887 1054 aaPredicted RBP17.72■□□□□ 0.43
NEDD1-205ENST00000553609 UBXN2AP68543 259 aa17.72■□□□□ 0.43
NEDD1-205ENST00000553609 HTATIP2Q9BUP3 242 aa17.72■□□□□ 0.43
NEDD1-205ENST00000553609 SIL1Q9H173 461 aa17.72■□□□□ 0.43
NEDD1-205ENST00000553609 PHIPQ8WWQ0 1821 aa17.72■□□□□ 0.43
NEDD1-205ENST00000553609 AK9Q5TCS8 1911 aa17.71■□□□□ 0.43
NEDD1-205ENST00000553609 DDTLA6NHG4 134 aaPredicted RBP17.71■□□□□ 0.43
NEDD1-205ENST00000553609 SEMA3EO15041 775 aa17.71■□□□□ 0.43
NEDD1-205ENST00000553609 ZBTB7BO15156 539 aaPredicted RBP17.71■□□□□ 0.43
NEDD1-205ENST00000553609 SGPL1O95470 568 aa17.71■□□□□ 0.43
NEDD1-205ENST00000553609 FLT3LGP49771 235 aa17.71■□□□□ 0.43
NEDD1-205ENST00000553609 FASTKD5Q7L8L6 764 aaKnown RBP17.71■□□□□ 0.43
NEDD1-205ENST00000553609 DDX4Q9NQI0 724 aaKnown RBP17.71■□□□□ 0.43
NEDD1-205ENST00000553609 FRMD4AQ9P2Q2 1039 aaPredicted RBP17.71■□□□□ 0.43
NEDD1-205ENST00000553609 BIN2Q9UBW5 565 aaPredicted RBP17.71■□□□□ 0.43
NEDD1-205ENST00000553609 DENND2AQ9ULE3 1009 aa17.71■□□□□ 0.43
NEDD1-205ENST00000553609 SLC45A1Q9Y2W3 748 aa17.71■□□□□ 0.43
NEDD1-205ENST00000553609 A0A0C4DFX4 3053 aa17.71■□□□□ 0.43
NEDD1-205ENST00000553609 ADCY3O60266 1144 aa17.7■□□□□ 0.42
NEDD1-205ENST00000553609 ELNP15502 786 aa17.7■□□□□ 0.42
NEDD1-205ENST00000553609 ADORA1P30542 326 aa17.7■□□□□ 0.42
NEDD1-205ENST00000553609 IRF5Q13568 498 aa17.7■□□□□ 0.42
NEDD1-205ENST00000553609 GNL3LQ9NVN8 582 aaKnown RBP17.7■□□□□ 0.42
NEDD1-205ENST00000553609 CEP126Q9P2H0 1117 aa17.7■□□□□ 0.42
NEDD1-205ENST00000553609 DOCK1Q14185 1865 aa17.69■□□□□ 0.42
NEDD1-205ENST00000553609 INHAP05111 366 aa17.69■□□□□ 0.42
NEDD1-205ENST00000553609 RASGRF1Q13972 1273 aa17.69■□□□□ 0.42
NEDD1-205ENST00000553609 CCDC84Q86UT8 332 aaPredicted RBP17.69■□□□□ 0.42
NEDD1-205ENST00000553609 PXYLP1Q8TE99 480 aa17.69■□□□□ 0.42
NEDD1-205ENST00000553609 FAM163AQ96GL9 167 aaPredicted RBP17.69■□□□□ 0.42
NEDD1-205ENST00000553609 PICK1Q9NRD5 415 aa17.69■□□□□ 0.42
NEDD1-205ENST00000553609 RNF216Q9NWF9 866 aaPredicted RBP17.69■□□□□ 0.42
NEDD1-205ENST00000553609 PA2G4Q9UQ80 394 aaKnown RBP17.69■□□□□ 0.42
NEDD1-205ENST00000553609 PDS5AQ29RF7 1337 aaKnown RBP17.69■□□□□ 0.42
NEDD1-205ENST00000553609 MYH2Q9UKX2 1941 aa17.68■□□□□ 0.42
NEDD1-205ENST00000553609 CCDC102BQ68D86 513 aa17.68■□□□□ 0.42
NEDD1-205ENST00000553609 GADL1Q6ZQY3 521 aa17.68■□□□□ 0.42
NEDD1-205ENST00000553609 ZNF384Q8TF68 577 aa17.68■□□□□ 0.42
NEDD1-205ENST00000553609 PAK6Q9NQU5 681 aaPredicted RBP17.68■□□□□ 0.42
NEDD1-205ENST00000553609 NR2E3Q9Y5X4 410 aa17.68■□□□□ 0.42
NEDD1-205ENST00000553609 E9PSI1 815 aa17.67■□□□□ 0.42
NEDD1-205ENST00000553609 TNPO2O14787 897 aaKnown RBP17.67■□□□□ 0.42
NEDD1-205ENST00000553609 CTNND1O60716 968 aaKnown RBP17.67■□□□□ 0.42
NEDD1-205ENST00000553609 UBTFL1P0CB47 393 aaPredicted RBP17.67■□□□□ 0.42
NEDD1-205ENST00000553609 IL15P40933 162 aaPredicted RBP17.67■□□□□ 0.42
NEDD1-205ENST00000553609 RHBDL3P58872 404 aa17.67■□□□□ 0.42
NEDD1-205ENST00000553609 CACNB1Q02641 598 aaPredicted RBP17.67■□□□□ 0.42
NEDD1-205ENST00000553609 SLFN5Q08AF3 891 aa17.67■□□□□ 0.42
NEDD1-205ENST00000553609 ALDH1L2Q3SY69 923 aa17.67■□□□□ 0.42
NEDD1-205ENST00000553609 CRISPLD2Q9H0B8 497 aa17.67■□□□□ 0.42
NEDD1-205ENST00000553609 AGTPBP1Q9UPW5 1226 aa17.67■□□□□ 0.42
NEDD1-205ENST00000553609 TRIM75PA6NK02 468 aa17.66■□□□□ 0.42
NEDD1-205ENST00000553609 SOX1O00570 391 aaPredicted RBP17.66■□□□□ 0.42
NEDD1-205ENST00000553609 TREML2Q5T2D2 321 aa17.66■□□□□ 0.42
NEDD1-205ENST00000553609 DEFB118Q96PH6 123 aa17.66■□□□□ 0.42
NEDD1-205ENST00000553609 COPRSQ9NQ92 184 aa17.66■□□□□ 0.42
NEDD1-205ENST00000553609 LRRFIP2Q9Y608 721 aaKnown RBP17.66■□□□□ 0.42
NEDD1-205ENST00000553609 CUL9Q8IWT3 2517 aa17.65■□□□□ 0.42
NEDD1-205ENST00000553609 ALPK3Q96L96 1907 aa17.65■□□□□ 0.42
NEDD1-205ENST00000553609 A0A1W2PPC1 479 aa17.65■□□□□ 0.42
NEDD1-205ENST00000553609 BTDP43251 543 aa17.65■□□□□ 0.42
NEDD1-205ENST00000553609 DZIP1Q86YF9 867 aaKnown RBP17.65■□□□□ 0.42
NEDD1-205ENST00000553609 ZSCAN29Q8IWY8 852 aaPredicted RBP17.65■□□□□ 0.42
NEDD1-205ENST00000553609 ZGPATQ8N5A5 531 aaKnown RBP17.65■□□□□ 0.42
NEDD1-205ENST00000553609 SMCR8Q8TEV9 937 aaPredicted RBP17.65■□□□□ 0.42
NEDD1-205ENST00000553609 MROH7-TTC4A0A0A0MT08 1334 aa17.65■□□□□ 0.42
NEDD1-205ENST00000553609 DOCK3Q8IZD9 2030 aa17.64■□□□□ 0.41
NEDD1-205ENST00000553609 LOC285556D6RIA3 1793 aa17.64■□□□□ 0.41
NEDD1-205ENST00000553609 TBC1D12O60347 775 aa17.64■□□□□ 0.41
NEDD1-205ENST00000553609 NPM3O75607 178 aaKnown RBP17.64■□□□□ 0.41
NEDD1-205ENST00000553609 CAPN2P17655 700 aa17.64■□□□□ 0.41
NEDD1-205ENST00000553609 TIMM10P62072 90 aa17.64■□□□□ 0.41
NEDD1-205ENST00000553609 PICALMQ13492 652 aa17.64■□□□□ 0.41
NEDD1-205ENST00000553609 FAM110CQ1W6H9 321 aa17.64■□□□□ 0.41
NEDD1-205ENST00000553609 ANKRD13CQ8N6S4 541 aa17.64■□□□□ 0.41
NEDD1-205ENST00000553609 SMC4Q9NTJ3 1288 aa17.64■□□□□ 0.41
NEDD1-205ENST00000553609 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.64■□□□□ 0.41
NEDD1-205ENST00000553609 GPR75-ASB3A0A0A6YYF3 556 aa17.63■□□□□ 0.41
NEDD1-205ENST00000553609 FAM196BA6NMK8 535 aa17.63■□□□□ 0.41
NEDD1-205ENST00000553609 MECOMQ03112 1051 aa17.63■□□□□ 0.41
NEDD1-205ENST00000553609 DIS3LQ8TF46 1054 aaKnown RBP17.63■□□□□ 0.41
NEDD1-205ENST00000553609 ABCF2Q9UG63 623 aa17.63■□□□□ 0.41
NEDD1-205ENST00000553609 COL2A1P02458 1487 aaPredicted RBP17.63■□□□□ 0.41
NEDD1-205ENST00000553609 EVI5O60447 810 aa17.62■□□□□ 0.41
NEDD1-205ENST00000553609 TFRCP02786 760 aaKnown RBP17.62■□□□□ 0.41
NEDD1-205ENST00000553609 RRP1BQ14684 758 aaKnown RBP17.62■□□□□ 0.41
NEDD1-205ENST00000553609 PROCA1Q8NCQ7 364 aaPredicted RBP17.62■□□□□ 0.41
NEDD1-205ENST00000553609 CDCA7LQ96GN5 454 aa17.62■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms