RNA–Protein interactions for RNA: ENST00000553508.5

PCNX1-205, Transcript of pecanex 1, humanhuman

TSL 3

Gene PCNX1, Length 645 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-205ENST00000553508 TGFB1P01137 390 aa11.5□□□□□ -0.57
PCNX1-205ENST00000553508 DYNC1LI2O43237 492 aaPredicted RBP11.49□□□□□ -0.57
PCNX1-205ENST00000553508 LMNB1P20700 586 aa11.49□□□□□ -0.57
PCNX1-205ENST00000553508 PTPN11Q06124 597 aaPredicted RBP11.49□□□□□ -0.57
PCNX1-205ENST00000553508 ZC3H12AQ5D1E8 599 aaKnown RBP11.49□□□□□ -0.57
PCNX1-205ENST00000553508 C12orf40Q86WS4 652 aa11.49□□□□□ -0.57
PCNX1-205ENST00000553508 ZDHHC13Q8IUH4 622 aa11.49□□□□□ -0.57
PCNX1-205ENST00000553508 SSU72Q9NP77 194 aaKnown RBP11.49□□□□□ -0.57
PCNX1-205ENST00000553508 PRKAG2Q9UGJ0 569 aa11.49□□□□□ -0.57
PCNX1-205ENST00000553508 RNF112Q9ULX5 631 aa11.49□□□□□ -0.57
PCNX1-205ENST00000553508 F6X3S4 739 aa11.48□□□□□ -0.57
PCNX1-205ENST00000553508 F13BP05160 661 aa11.48□□□□□ -0.57
PCNX1-205ENST00000553508 ADMP35318 185 aa11.48□□□□□ -0.57
PCNX1-205ENST00000553508 PPM1JQ5JR12 505 aa11.48□□□□□ -0.57
PCNX1-205ENST00000553508 CRELD1Q96HD1 420 aa11.48□□□□□ -0.57
PCNX1-205ENST00000553508 PICK1Q9NRD5 415 aa11.48□□□□□ -0.57
PCNX1-205ENST00000553508 ATG3Q9NT62 314 aa11.48□□□□□ -0.57
PCNX1-205ENST00000553508 CACNA2D2Q9NY47 1150 aa11.48□□□□□ -0.57
PCNX1-205ENST00000553508 PCDHB5Q9Y5E4 795 aa11.48□□□□□ -0.57
PCNX1-205ENST00000553508 USP31Q70CQ4 1352 aa11.47□□□□□ -0.57
PCNX1-205ENST00000553508 LIG3P49916 1009 aa11.47□□□□□ -0.57
PCNX1-205ENST00000553508 SMYD4Q8IYR2 804 aaPredicted RBP11.47□□□□□ -0.57
PCNX1-205ENST00000553508 SSTR4P31391 388 aa11.46□□□□□ -0.57
PCNX1-205ENST00000553508 SEPT6Q14141 434 aa11.46□□□□□ -0.57
PCNX1-205ENST00000553508 ELMO3Q96BJ8 720 aa11.46□□□□□ -0.57
PCNX1-205ENST00000553508 OSBPL1AQ9BXW6 950 aa11.46□□□□□ -0.57
PCNX1-205ENST00000553508 NEFMP07197 916 aa11.45□□□□□ -0.58
PCNX1-205ENST00000553508 ST13P50502 369 aaKnown RBP11.45□□□□□ -0.58
PCNX1-205ENST00000553508 PDZRN4Q6ZMN7 1036 aaPredicted RBP11.45□□□□□ -0.58
PCNX1-205ENST00000553508 ZAR1Q86SH2 424 aa11.45□□□□□ -0.58
PCNX1-205ENST00000553508 GIMAP7Q8NHV1 300 aa11.45□□□□□ -0.58
PCNX1-205ENST00000553508 TLR6Q9Y2C9 796 aa11.45□□□□□ -0.58
PCNX1-205ENST00000553508 FAM170BA6NMN3 283 aa11.44□□□□□ -0.58
PCNX1-205ENST00000553508 ZNF16P17020 682 aaPredicted RBP11.44□□□□□ -0.58
PCNX1-205ENST00000553508 ERVK-24P63145 666 aa11.44□□□□□ -0.58
PCNX1-205ENST00000553508 INPP5AQ14642 412 aa11.44□□□□□ -0.58
PCNX1-205ENST00000553508 Q8N3U1 123 aa11.44□□□□□ -0.58
PCNX1-205ENST00000553508 RNF214Q8ND24 703 aa11.44□□□□□ -0.58
PCNX1-205ENST00000553508 C1GALT1Q9NS00 363 aa11.44□□□□□ -0.58
PCNX1-205ENST00000553508 PRR19A6NJB7 356 aa11.43□□□□□ -0.58
PCNX1-205ENST00000553508 ITGAEP38570 1179 aa11.43□□□□□ -0.58
PCNX1-205ENST00000553508 CDK8P49336 464 aa11.43□□□□□ -0.58
PCNX1-205ENST00000553508 CDK5R2Q13319 367 aa11.43□□□□□ -0.58
PCNX1-205ENST00000553508 SEZ6L2Q6UXD5 910 aa11.43□□□□□ -0.58
PCNX1-205ENST00000553508 AGMOQ6ZNB7 445 aa11.43□□□□□ -0.58
PCNX1-205ENST00000553508 GAL3ST3Q96A11 431 aa11.43□□□□□ -0.58
PCNX1-205ENST00000553508 ISL2Q96A47 359 aa11.43□□□□□ -0.58
PCNX1-205ENST00000553508 PCOLCE2Q9UKZ9 415 aa11.43□□□□□ -0.58
PCNX1-205ENST00000553508 PRAMEF27A3QJZ7 478 aa11.42□□□□□ -0.58
PCNX1-205ENST00000553508 RPS26P62854 115 aaKnown RBP11.42□□□□□ -0.58
PCNX1-205ENST00000553508 LRFN4Q6PJG9 635 aa11.42□□□□□ -0.58
PCNX1-205ENST00000553508 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.42□□□□□ -0.58
PCNX1-205ENST00000553508 JARID2Q92833 1246 aaPredicted RBP11.42□□□□□ -0.58
PCNX1-205ENST00000553508 GATA6Q92908 595 aa11.42□□□□□ -0.58
PCNX1-205ENST00000553508 NOC4LQ9BVI4 516 aaKnown RBP11.42□□□□□ -0.58
PCNX1-205ENST00000553508 TFE3P19532 575 aaPredicted RBP11.41□□□□□ -0.58
PCNX1-205ENST00000553508 PLPPR2Q96GM1 343 aa11.41□□□□□ -0.58
PCNX1-205ENST00000553508 BCL11AQ9H165 835 aa11.41□□□□□ -0.58
PCNX1-205ENST00000553508 LEMD3Q9Y2U8 911 aa11.41□□□□□ -0.58
PCNX1-205ENST00000553508 HYAL3O43820 417 aaPredicted RBP11.4□□□□□ -0.58
PCNX1-205ENST00000553508 MED26O95402 600 aa11.4□□□□□ -0.58
PCNX1-205ENST00000553508 LRP8Q14114 963 aa11.4□□□□□ -0.58
PCNX1-205ENST00000553508 ARTNQ5T4W7 220 aa11.4□□□□□ -0.58
PCNX1-205ENST00000553508 SCARA3Q6AZY7 606 aa11.4□□□□□ -0.58
PCNX1-205ENST00000553508 MIR1-1HGQ9H1L0 117 aa11.4□□□□□ -0.58
PCNX1-205ENST00000553508 COBLO75128 1261 aa11.39□□□□□ -0.59
PCNX1-205ENST00000553508 RLBP1P12271 317 aa11.39□□□□□ -0.59
PCNX1-205ENST00000553508 WIPI1Q5MNZ9 446 aaPredicted RBP11.39□□□□□ -0.59
PCNX1-205ENST00000553508 ZNF765Q7L2R6 523 aa11.39□□□□□ -0.59
PCNX1-205ENST00000553508 HDXQ7Z353 690 aa11.39□□□□□ -0.59
PCNX1-205ENST00000553508 UBE3DQ7Z6J8 389 aa11.39□□□□□ -0.59
PCNX1-205ENST00000553508 ZFP64Q9NPA5 681 aa11.39□□□□□ -0.59
PCNX1-205ENST00000553508 PCMTD2Q9NV79 361 aa11.39□□□□□ -0.59
PCNX1-205ENST00000553508 PIM2Q9P1W9 311 aa11.39□□□□□ -0.59
PCNX1-205ENST00000553508 HOXA10P31260 410 aaPredicted RBP11.38□□□□□ -0.59
PCNX1-205ENST00000553508 GRIK1P39086 918 aa11.38□□□□□ -0.59
PCNX1-205ENST00000553508 ZBTB37Q5TC79 503 aa11.38□□□□□ -0.59
PCNX1-205ENST00000553508 DUSP27Q5VZP5 1158 aa11.38□□□□□ -0.59
PCNX1-205ENST00000553508 RELL1Q8IUW5 271 aa11.38□□□□□ -0.59
PCNX1-205ENST00000553508 PHC3Q8NDX5 983 aa11.38□□□□□ -0.59
PCNX1-205ENST00000553508 GBP2P32456 591 aaPredicted RBP11.37□□□□□ -0.59
PCNX1-205ENST00000553508 RING1Q06587 406 aa11.37□□□□□ -0.59
PCNX1-205ENST00000553508 MRPL58Q14197 206 aaKnown RBP11.37□□□□□ -0.59
PCNX1-205ENST00000553508 CDC37L1Q7L3B6 337 aa11.37□□□□□ -0.59
PCNX1-205ENST00000553508 METTL22Q9BUU2 404 aaPredicted RBP11.37□□□□□ -0.59
PCNX1-205ENST00000553508 LRRC4CQ9HCJ2 640 aa11.37□□□□□ -0.59
PCNX1-205ENST00000553508 MINDY4BA8MYZ0 360 aa11.36□□□□□ -0.59
PCNX1-205ENST00000553508 FANCGO15287 622 aa11.36□□□□□ -0.59
PCNX1-205ENST00000553508 FAM87AP0C7U9 286 aa11.36□□□□□ -0.59
PCNX1-205ENST00000553508 NTF4P34130 210 aa11.36□□□□□ -0.59
PCNX1-205ENST00000553508 OGFOD3Q6PK18 319 aa11.36□□□□□ -0.59
PCNX1-205ENST00000553508 LOC100996750A0A140TA64 210 aa11.35□□□□□ -0.59
PCNX1-205ENST00000553508 CYP26A1O43174 497 aa11.35□□□□□ -0.59
PCNX1-205ENST00000553508 CD97P48960 835 aa11.35□□□□□ -0.59
PCNX1-205ENST00000553508 CYFIP1Q7L576 1253 aa11.35□□□□□ -0.59
PCNX1-205ENST00000553508 KRTAP4-6Q9BYQ5 205 aa11.35□□□□□ -0.59
PCNX1-205ENST00000553508 SNCAIPQ9Y6H5 919 aa11.35□□□□□ -0.59
PCNX1-205ENST00000553508 LEFTY1O75610 366 aa11.34□□□□□ -0.59
PCNX1-205ENST00000553508 PF4P02776 101 aa11.34□□□□□ -0.59
PCNX1-205ENST00000553508 ETF1P62495 437 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms