RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.47□□□□□ -0.41
LINC00517-201ENST00000553396 HOOK2Q96ED9 719 aa12.47□□□□□ -0.41
LINC00517-201ENST00000553396 FAM163AQ96GL9 167 aaPredicted RBP12.47□□□□□ -0.41
LINC00517-201ENST00000553396 CSADQ9Y600 493 aa12.47□□□□□ -0.41
LINC00517-201ENST00000553396 SMARCA5O60264 1052 aaPredicted RBP12.46□□□□□ -0.41
LINC00517-201ENST00000553396 IDH1O75874 414 aaKnown RBP12.46□□□□□ -0.41
LINC00517-201ENST00000553396 ZBTB48P10074 688 aaPredicted RBP12.46□□□□□ -0.41
LINC00517-201ENST00000553396 GJA5P36382 358 aa12.46□□□□□ -0.41
LINC00517-201ENST00000553396 RHBDL3P58872 404 aa12.46□□□□□ -0.41
LINC00517-201ENST00000553396 MAP3K9P80192 1104 aa12.46□□□□□ -0.41
LINC00517-201ENST00000553396 DCAF15Q66K64 600 aa12.46□□□□□ -0.41
LINC00517-201ENST00000553396 ADGRA1Q86SQ6 560 aa12.46□□□□□ -0.41
LINC00517-201ENST00000553396 ZSCAN29Q8IWY8 852 aaPredicted RBP12.46□□□□□ -0.41
LINC00517-201ENST00000553396 OPTNQ96CV9 577 aa12.46□□□□□ -0.41
LINC00517-201ENST00000553396 CRBNQ96SW2 442 aa12.46□□□□□ -0.41
LINC00517-201ENST00000553396 NOL10Q9BSC4 688 aaKnown RBP12.46□□□□□ -0.41
LINC00517-201ENST00000553396 IDI2Q9BXS1 227 aa12.46□□□□□ -0.41
LINC00517-201ENST00000553396 ZNF341Q9BYN7 854 aa12.46□□□□□ -0.41
LINC00517-201ENST00000553396 ANTXR1Q9H6X2 564 aa12.46□□□□□ -0.41
LINC00517-201ENST00000553396 DDX4Q9NQI0 724 aaKnown RBP12.46□□□□□ -0.41
LINC00517-201ENST00000553396 SAGE1Q9NXZ1 904 aa12.46□□□□□ -0.41
LINC00517-201ENST00000553396 AATFQ9NY61 560 aaKnown RBP eCLIP12.46□□□□□ -0.41
LINC00517-201ENST00000553396 FOCADQ5VW36 1801 aa12.46□□□□□ -0.42
LINC00517-201ENST00000553396 UNCXA6NJT0 531 aa12.45□□□□□ -0.42
LINC00517-201ENST00000553396 ENTPD3O75355 529 aa12.45□□□□□ -0.42
LINC00517-201ENST00000553396 SREBF2Q12772 1141 aa12.45□□□□□ -0.42
LINC00517-201ENST00000553396 TEX11Q8IYF3 940 aa12.45□□□□□ -0.42
LINC00517-201ENST00000553396 SH3RF3Q8TEJ3 882 aaPredicted RBP12.45□□□□□ -0.42
LINC00517-201ENST00000553396 ZKSCAN4Q969J2 545 aaPredicted RBP12.45□□□□□ -0.42
LINC00517-201ENST00000553396 OTUD5Q96G74 571 aa12.45□□□□□ -0.42
LINC00517-201ENST00000553396 DNAJC2Q99543 621 aaKnown RBP12.45□□□□□ -0.42
LINC00517-201ENST00000553396 LRRCC1Q9C099 1032 aa12.45□□□□□ -0.42
LINC00517-201ENST00000553396 PCDHB15Q9Y5E8 787 aa12.45□□□□□ -0.42
LINC00517-201ENST00000553396 DDTLA6NHG4 134 aaPredicted RBP12.44□□□□□ -0.42
LINC00517-201ENST00000553396 MANSC4A6NHS7 340 aaPredicted RBP12.44□□□□□ -0.42
LINC00517-201ENST00000553396 INPP5BP32019 993 aa12.44□□□□□ -0.42
LINC00517-201ENST00000553396 TM4SF4P48230 202 aa12.44□□□□□ -0.42
LINC00517-201ENST00000553396 SH3BP5LQ7L8J4 393 aa12.44□□□□□ -0.42
LINC00517-201ENST00000553396 SNCAIPQ9Y6H5 919 aa12.44□□□□□ -0.42
LINC00517-201ENST00000553396 ATRNL1Q5VV63 1379 aa12.43□□□□□ -0.42
LINC00517-201ENST00000553396 MYH7P12883 1935 aa12.43□□□□□ -0.42
LINC00517-201ENST00000553396 TBC1D8O95759 1140 aa12.43□□□□□ -0.42
LINC00517-201ENST00000553396 BAG3O95817 575 aa12.43□□□□□ -0.42
LINC00517-201ENST00000553396 SLURP2P0DP57 97 aa12.43□□□□□ -0.42
LINC00517-201ENST00000553396 CYP7A1P22680 504 aa12.43□□□□□ -0.42
LINC00517-201ENST00000553396 MAGEB6Q8N7X4 407 aa12.43□□□□□ -0.42
LINC00517-201ENST00000553396 MIGA1Q8NAN2 632 aa12.43□□□□□ -0.42
LINC00517-201ENST00000553396 MYH1P12882 1939 aa12.43□□□□□ -0.42
LINC00517-201ENST00000553396 DOCK1Q14185 1865 aa12.42□□□□□ -0.42
LINC00517-201ENST00000553396 SIPA1L1O43166 1804 aa12.42□□□□□ -0.42
LINC00517-201ENST00000553396 ATAD5Q96QE3 1844 aa12.42□□□□□ -0.42
LINC00517-201ENST00000553396 SPDYE5A6NIY4 337 aa12.42□□□□□ -0.42
LINC00517-201ENST00000553396 FAM196BA6NMK8 535 aa12.42□□□□□ -0.42
LINC00517-201ENST00000553396 IGF2BP3O00425 579 aaKnown RBP eCLIP12.42□□□□□ -0.42
LINC00517-201ENST00000553396 GOLIM4O00461 696 aa12.42□□□□□ -0.42
LINC00517-201ENST00000553396 PITPNM1O00562 1244 aa12.42□□□□□ -0.42
LINC00517-201ENST00000553396 DYNLL1P63167 89 aaKnown RBP12.42□□□□□ -0.42
LINC00517-201ENST00000553396 MAP3K12Q12852 859 aa12.42□□□□□ -0.42
LINC00517-201ENST00000553396 IFFO2Q5TF58 517 aa12.42□□□□□ -0.42
LINC00517-201ENST00000553396 IFNL1Q8IU54 200 aa12.42□□□□□ -0.42
LINC00517-201ENST00000553396 MAPKAPK5Q8IW41 473 aa12.42□□□□□ -0.42
LINC00517-201ENST00000553396 EDC3Q96F86 508 aaKnown RBP12.42□□□□□ -0.42
LINC00517-201ENST00000553396 OSBPL5Q9H0X9 879 aaPredicted RBP12.42□□□□□ -0.42
LINC00517-201ENST00000553396 BOLA2Q9H3K6 86 aa12.42□□□□□ -0.42
LINC00517-201ENST00000553396 DCTPP1Q9H773 170 aa12.42□□□□□ -0.42
LINC00517-201ENST00000553396 PLCG2P16885 1265 aa12.41□□□□□ -0.42
LINC00517-201ENST00000553396 TTF1Q15361 905 aaPredicted RBP12.41□□□□□ -0.42
LINC00517-201ENST00000553396 ERO1BQ86YB8 467 aa12.41□□□□□ -0.42
LINC00517-201ENST00000553396 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.41□□□□□ -0.42
LINC00517-201ENST00000553396 TGFBRAP1Q8WUH2 860 aa12.41□□□□□ -0.42
LINC00517-201ENST00000553396 R3HDMLQ9H3Y0 253 aa12.41□□□□□ -0.42
LINC00517-201ENST00000553396 FLT1P17948 1338 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 NAV1Q8NEY1 1877 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 CCL15-CCL14A0A0B4J2E2 113 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 IRF6O14896 467 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 MAP4K4O95819 1239 aaPredicted RBP12.4□□□□□ -0.42
LINC00517-201ENST00000553396 ATP5JP18859 108 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 GTF2A2P52657 109 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 INHBEP58166 350 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 PPP4CP60510 307 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 CCL15Q16663 113 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 SLC4A8Q2Y0W8 1093 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 BRI3BPQ8WY22 251 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 MS4A4AQ96JQ5 239 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 PTPN18Q99952 460 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 PAG1Q9NWQ8 432 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 ZNF112Q9UJU3 913 aa12.4□□□□□ -0.42
LINC00517-201ENST00000553396 COL2A1P02458 1487 aaPredicted RBP12.4□□□□□ -0.43
LINC00517-201ENST00000553396 PHIPQ8WWQ0 1821 aa12.39□□□□□ -0.43
LINC00517-201ENST00000553396 PTPRFP10586 1907 aa12.39□□□□□ -0.43
LINC00517-201ENST00000553396 PHF20L1A8MW92 1017 aa12.39□□□□□ -0.43
LINC00517-201ENST00000553396 IGSF3O75054 1194 aa12.39□□□□□ -0.43
LINC00517-201ENST00000553396 ALDH1A1P00352 501 aa12.39□□□□□ -0.43
LINC00517-201ENST00000553396 PDE6AP16499 860 aa12.39□□□□□ -0.43
LINC00517-201ENST00000553396 PPIL2Q13356 520 aa12.39□□□□□ -0.43
LINC00517-201ENST00000553396 NOL9Q5SY16 702 aaKnown RBP12.39□□□□□ -0.43
LINC00517-201ENST00000553396 SLC9C2Q5TAH2 1124 aa12.39□□□□□ -0.43
LINC00517-201ENST00000553396 TSHZ3Q63HK5 1081 aa12.39□□□□□ -0.43
LINC00517-201ENST00000553396 SAP30BPQ9UHR5 308 aaKnown RBP12.39□□□□□ -0.43
LINC00517-201ENST00000553396 TESPA1A2RU30 521 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms