RNA–Protein interactions for RNA: ENST00000553237.5

CDK4-215, Transcript of cyclin dependent kinase 4, humanhuman

TSL 2

Gene CDK4, Length 952 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-215ENST00000553237 SLURP2P0DP57 97 aa19.5■□□□□ 0.71
CDK4-215ENST00000553237 RHBDL3P58872 404 aa19.5■□□□□ 0.71
CDK4-215ENST00000553237 PPIL2Q13356 520 aa19.5■□□□□ 0.71
CDK4-215ENST00000553237 EAF2Q96CJ1 260 aaPredicted RBP19.5■□□□□ 0.71
CDK4-215ENST00000553237 TLR7Q9NYK1 1049 aaKnown RBP19.5■□□□□ 0.71
CDK4-215ENST00000553237 DBNLQ9UJU6 430 aaKnown RBP19.5■□□□□ 0.71
CDK4-215ENST00000553237 RFX7Q2KHR2 1363 aa19.49■□□□□ 0.71
CDK4-215ENST00000553237 CETPP11597 493 aa19.49■□□□□ 0.71
CDK4-215ENST00000553237 PPATQ06203 517 aa19.49■□□□□ 0.71
CDK4-215ENST00000553237 SNAPC2Q13487 334 aa19.49■□□□□ 0.71
CDK4-215ENST00000553237 TAF1CQ15572 869 aaPredicted RBP19.49■□□□□ 0.71
CDK4-215ENST00000553237 CYP2E1P05181 493 aaPredicted RBP19.48■□□□□ 0.71
CDK4-215ENST00000553237 ZAP70P43403 619 aa19.48■□□□□ 0.71
CDK4-215ENST00000553237 SOX10P56693 466 aa19.48■□□□□ 0.71
CDK4-215ENST00000553237 GOLGA6L2Q8N9W4 650 aaPredicted RBP19.48■□□□□ 0.71
CDK4-215ENST00000553237 CD99L2Q8TCZ2 262 aa19.48■□□□□ 0.71
CDK4-215ENST00000553237 ZFYVE28Q9HCC9 887 aa19.48■□□□□ 0.71
CDK4-215ENST00000553237 TRIM17Q9Y577 477 aa19.48■□□□□ 0.71
CDK4-215ENST00000553237 LAMB1P07942 1786 aa19.47■□□□□ 0.71
CDK4-215ENST00000553237 ATRNL1Q5VV63 1379 aa19.47■□□□□ 0.71
CDK4-215ENST00000553237 PHF20L1A8MW92 1017 aa19.47■□□□□ 0.71
CDK4-215ENST00000553237 BTBD19C9JJ37 291 aa19.47■□□□□ 0.71
CDK4-215ENST00000553237 RGS19P49795 217 aa19.47■□□□□ 0.71
CDK4-215ENST00000553237 NAA16Q6N069 864 aaPredicted RBP19.47■□□□□ 0.71
CDK4-215ENST00000553237 FBXO46Q6PJ61 603 aaPredicted RBP19.47■□□□□ 0.71
CDK4-215ENST00000553237 DDX19BQ9UMR2 479 aa19.47■□□□□ 0.71
CDK4-215ENST00000553237 SP3Q02447 781 aa19.46■□□□□ 0.71
CDK4-215ENST00000553237 NOL9Q5SY16 702 aaKnown RBP19.46■□□□□ 0.71
CDK4-215ENST00000553237 OTOP1Q7RTM1 612 aa19.46■□□□□ 0.71
CDK4-215ENST00000553237 AACSQ86V21 672 aa19.46■□□□□ 0.71
CDK4-215ENST00000553237 ERC1Q8IUD2 1116 aa19.46■□□□□ 0.71
CDK4-215ENST00000553237 TEX11Q8IYF3 940 aa19.46■□□□□ 0.71
CDK4-215ENST00000553237 ERO1AQ96HE7 468 aa19.46■□□□□ 0.71
CDK4-215ENST00000553237 ZNF512BQ96KM6 892 aaPredicted RBP19.46■□□□□ 0.71
CDK4-215ENST00000553237 BCL11AQ9H165 835 aa19.46■□□□□ 0.71
CDK4-215ENST00000553237 PIH1D3Q9NQM4 214 aaKnown RBP19.46■□□□□ 0.71
CDK4-215ENST00000553237 APBB1O00213 710 aa19.45■□□□□ 0.7
CDK4-215ENST00000553237 MLLT1Q03111 559 aaPredicted RBP19.45■□□□□ 0.7
CDK4-215ENST00000553237 SH3RF3Q8TEJ3 882 aaPredicted RBP19.45■□□□□ 0.7
CDK4-215ENST00000553237 NOL10Q9BSC4 688 aaKnown RBP19.45■□□□□ 0.7
CDK4-215ENST00000553237 IL1RAPL2Q9NP60 686 aa19.45■□□□□ 0.7
CDK4-215ENST00000553237 ZBTB40Q9NUA8 1239 aa19.45■□□□□ 0.7
CDK4-215ENST00000553237 AATFQ9NY61 560 aaKnown RBP eCLIP19.45■□□□□ 0.7
CDK4-215ENST00000553237 CAP1Q01518 475 aa19.44■□□□□ 0.7
CDK4-215ENST00000553237 MAP3K10Q02779 954 aa19.44■□□□□ 0.7
CDK4-215ENST00000553237 C20orf194Q5TEA3 1177 aa19.44■□□□□ 0.7
CDK4-215ENST00000553237 SIRT2Q8IXJ6 389 aa19.44■□□□□ 0.7
CDK4-215ENST00000553237 RPAP2Q8IXW5 612 aaPredicted RBP19.44■□□□□ 0.7
CDK4-215ENST00000553237 PICK1Q9NRD5 415 aa19.44■□□□□ 0.7
CDK4-215ENST00000553237 KCNH4Q9UQ05 1017 aa19.44■□□□□ 0.7
CDK4-215ENST00000553237 NDUFB9Q9Y6M9 179 aa19.44■□□□□ 0.7
CDK4-215ENST00000553237 ZHX2Q9Y6X8 837 aa19.44■□□□□ 0.7
CDK4-215ENST00000553237 FAM196BA6NMK8 535 aa19.43■□□□□ 0.7
CDK4-215ENST00000553237 NPM3O75607 178 aaKnown RBP19.43■□□□□ 0.7
CDK4-215ENST00000553237 BAG3O95817 575 aa19.43■□□□□ 0.7
CDK4-215ENST00000553237 MAP4K4O95819 1239 aaPredicted RBP19.43■□□□□ 0.7
CDK4-215ENST00000553237 HSP90AB4PQ58FF6 505 aa19.43■□□□□ 0.7
CDK4-215ENST00000553237 ADGRA1Q86SQ6 560 aa19.43■□□□□ 0.7
CDK4-215ENST00000553237 SCYL3Q8IZE3 742 aa19.43■□□□□ 0.7
CDK4-215ENST00000553237 RHPN1Q8TCX5 695 aa19.43■□□□□ 0.7
CDK4-215ENST00000553237 OSBPL5Q9H0X9 879 aaPredicted RBP19.43■□□□□ 0.7
CDK4-215ENST00000553237 EFCC1Q9HA90 598 aa19.43■□□□□ 0.7
CDK4-215ENST00000553237 PTPRAP18433 802 aa19.42■□□□□ 0.7
CDK4-215ENST00000553237 XPO5Q9HAV4 1204 aaKnown RBP eCLIP19.42■□□□□ 0.7
CDK4-215ENST00000553237 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.42■□□□□ 0.7
CDK4-215ENST00000553237 CXCL11O14625 94 aa19.41■□□□□ 0.7
CDK4-215ENST00000553237 TLR2O60603 784 aa19.41■□□□□ 0.7
CDK4-215ENST00000553237 CTNND1O60716 968 aaKnown RBP19.41■□□□□ 0.7
CDK4-215ENST00000553237 HMMRO75330 724 aa19.41■□□□□ 0.7
CDK4-215ENST00000553237 IDH1O75874 414 aaKnown RBP19.41■□□□□ 0.7
CDK4-215ENST00000553237 PPP4CP60510 307 aa19.41■□□□□ 0.7
CDK4-215ENST00000553237 CCDC84Q86UT8 332 aaPredicted RBP19.41■□□□□ 0.7
CDK4-215ENST00000553237 TGFBRAP1Q8WUH2 860 aa19.41■□□□□ 0.7
CDK4-215ENST00000553237 YTHDC1Q96MU7 727 aaKnown RBP19.41■□□□□ 0.7
CDK4-215ENST00000553237 ZCCHC17Q9NP64 241 aaKnown RBP19.41■□□□□ 0.7
CDK4-215ENST00000553237 DOCK2Q92608 1830 aa19.41■□□□□ 0.7
CDK4-215ENST00000553237 PDHXO00330 501 aa19.4■□□□□ 0.7
CDK4-215ENST00000553237 TBC1D12O60347 775 aa19.4■□□□□ 0.7
CDK4-215ENST00000553237 ECM2O94769 699 aaPredicted RBP19.4■□□□□ 0.7
CDK4-215ENST00000553237 PLCG2P16885 1265 aa19.4■□□□□ 0.7
CDK4-215ENST00000553237 CYP7A1P22680 504 aa19.4■□□□□ 0.7
CDK4-215ENST00000553237 DYNLL1P63167 89 aaKnown RBP19.4■□□□□ 0.7
CDK4-215ENST00000553237 MOGSQ13724 837 aa19.4■□□□□ 0.7
CDK4-215ENST00000553237 ANKRD23Q86SG2 305 aa19.4■□□□□ 0.7
CDK4-215ENST00000553237 MAPKAPK5Q8IW41 473 aa19.4■□□□□ 0.7
CDK4-215ENST00000553237 CHMP4BQ9H444 224 aaKnown RBP19.4■□□□□ 0.7
CDK4-215ENST00000553237 ANTXR1Q9H6X2 564 aa19.4■□□□□ 0.7
CDK4-215ENST00000553237 PTPN22Q9Y2R2 807 aa19.4■□□□□ 0.7
CDK4-215ENST00000553237 CLASRPQ8N2M8 674 aaKnown RBP19.39■□□□□ 0.69
CDK4-215ENST00000553237 KIF1BPQ96EK5 621 aa19.39■□□□□ 0.69
CDK4-215ENST00000553237 CPA4Q9UI42 421 aa19.39■□□□□ 0.69
CDK4-215ENST00000553237 AFG3L2Q9Y4W6 797 aa19.39■□□□□ 0.69
CDK4-215ENST00000553237 PDE3AQ14432 1141 aa19.38■□□□□ 0.69
CDK4-215ENST00000553237 GPAT2Q6NUI2 795 aa19.38■□□□□ 0.69
CDK4-215ENST00000553237 MAGEB6Q8N7X4 407 aa19.38■□□□□ 0.69
CDK4-215ENST00000553237 MIGA1Q8NAN2 632 aa19.38■□□□□ 0.69
CDK4-215ENST00000553237 ARHGAP39Q9C0H5 1083 aa19.38■□□□□ 0.69
CDK4-215ENST00000553237 TRIM75PA6NK02 468 aa19.37■□□□□ 0.69
CDK4-215ENST00000553237 IFIT2P09913 472 aaKnown RBP19.37■□□□□ 0.69
CDK4-215ENST00000553237 RRP1BQ14684 758 aaKnown RBP19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms