RNA–Protein interactions for RNA: ENST00000552440.5

USP44-208, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 5 BASIC

Gene USP44, Length 1,818 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-208ENST00000552440 ADAM11O75078 769 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 HSD3B2P26439 372 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 PLEKHG6Q3KR16 790 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 SHKBP1Q8TBC3 707 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 SNX29Q8TEQ0 813 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 SLC7A3Q8WY07 619 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 RNF34Q969K3 372 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 PIM2Q9P1W9 311 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 KANSL3Q9P2N6 904 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 GABBR1Q9UBS5 961 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 LEMD3Q9Y2U8 911 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 OAS3Q9Y6K5 1087 aaKnown RBP5.6□□□□□ -1.51
USP44-208ENST00000552440 PNMA6FA0A0J9YX94 578 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 PRR19A6NJB7 356 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 NFKBIEO00221 500 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 DDX3YO15523 660 aaKnown RBP5.6□□□□□ -1.51
USP44-208ENST00000552440 PHACTR2O75167 634 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 TAL1P17542 331 aaPredicted RBP5.6□□□□□ -1.51
USP44-208ENST00000552440 MAP4P27816 1152 aaKnown RBP5.6□□□□□ -1.51
USP44-208ENST00000552440 NLRP12P59046 1061 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 GNL2Q13823 731 aaKnown RBP5.6□□□□□ -1.51
USP44-208ENST00000552440 SOGA3Q5TF21 947 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 ALG1LQ6GMV1 187 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 PAOXQ6QHF9 649 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 NME8Q8N427 588 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 C12orf50Q8NA57 414 aaPredicted RBP5.6□□□□□ -1.51
USP44-208ENST00000552440 DDX54Q8TDD1 881 aaKnown RBP5.6□□□□□ -1.51
USP44-208ENST00000552440 NXPE3Q969Y0 559 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 OSMRQ99650 979 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 IRF2BPLQ9H1B7 796 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 POLIQ9UNA4 740 aa5.6□□□□□ -1.51
USP44-208ENST00000552440 MED26O95402 600 aa5.59□□□□□ -1.51
USP44-208ENST00000552440 DNAJA1P31689 397 aaKnown RBP5.59□□□□□ -1.51
USP44-208ENST00000552440 ZNF76P36508 570 aa5.59□□□□□ -1.51
USP44-208ENST00000552440 PREPP48147 710 aa5.59□□□□□ -1.51
USP44-208ENST00000552440 USP11P51784 963 aa5.59□□□□□ -1.51
USP44-208ENST00000552440 EXOSC6Q5RKV6 272 aaKnown RBP5.59□□□□□ -1.51
USP44-208ENST00000552440 CCAR1Q8IX12 1150 aaKnown RBP5.59□□□□□ -1.51
USP44-208ENST00000552440 GPATCH11Q8N954 259 aa5.59□□□□□ -1.51
USP44-208ENST00000552440 OSBPL2Q9H1P3 480 aa5.59□□□□□ -1.51
USP44-208ENST00000552440 PCDH12Q9NPG4 1184 aa5.59□□□□□ -1.51
USP44-208ENST00000552440 WDR64B1ANS9 1081 aa5.58□□□□□ -1.52
USP44-208ENST00000552440 RXRBP28702 533 aa5.58□□□□□ -1.52
USP44-208ENST00000552440 GNA15P30679 374 aa5.58□□□□□ -1.52
USP44-208ENST00000552440 CCDC146Q8IYE0 955 aa5.58□□□□□ -1.52
USP44-208ENST00000552440 NAP1L5Q96NT1 182 aaPredicted RBP5.58□□□□□ -1.52
USP44-208ENST00000552440 OSBPL1AQ9BXW6 950 aa5.58□□□□□ -1.52
USP44-208ENST00000552440 TMPRSS13Q9BYE2 586 aa5.58□□□□□ -1.52
USP44-208ENST00000552440 BHLHE41Q9C0J9 482 aaPredicted RBP5.58□□□□□ -1.52
USP44-208ENST00000552440 ACBD3Q9H3P7 528 aa5.58□□□□□ -1.52
USP44-208ENST00000552440 ANGEL1Q9UNK9 670 aaKnown RBP5.58□□□□□ -1.52
USP44-208ENST00000552440 LONRF3Q496Y0 759 aa5.58□□□□□ -1.52
USP44-208ENST00000552440 FILIP1Q7Z7B0 1213 aa5.58□□□□□ -1.52
USP44-208ENST00000552440 RPUSD2Q8IZ73 545 aaKnown RBP5.58□□□□□ -1.52
USP44-208ENST00000552440 FBXL18Q96ME1 805 aa5.58□□□□□ -1.52
USP44-208ENST00000552440 GGNBP2Q9H3C7 697 aa5.58□□□□□ -1.52
USP44-208ENST00000552440 IFT57Q9NWB7 429 aa5.58□□□□□ -1.52
USP44-208ENST00000552440 RNF114Q9Y508 228 aa5.58□□□□□ -1.52
USP44-208ENST00000552440 MRPL42Q9Y6G3 142 aaKnown RBP5.58□□□□□ -1.52
USP44-208ENST00000552440 FAM95CA0A1B0GW59 222 aa5.57□□□□□ -1.52
USP44-208ENST00000552440 SH3BP5O60239 455 aa5.57□□□□□ -1.52
USP44-208ENST00000552440 HNRNPUQ00839 825 aaKnown RBP eCLIP5.57□□□□□ -1.52
USP44-208ENST00000552440 CYP27A1Q02318 531 aa5.57□□□□□ -1.52
USP44-208ENST00000552440 BMS1Q14692 1282 aaKnown RBP5.57□□□□□ -1.52
USP44-208ENST00000552440 FBF1Q8TES7 1133 aa5.57□□□□□ -1.52
USP44-208ENST00000552440 USP26Q9BXU7 913 aa5.57□□□□□ -1.52
USP44-208ENST00000552440 SOX1O00570 391 aaPredicted RBP5.56□□□□□ -1.52
USP44-208ENST00000552440 TNFRSF21O75509 655 aa5.56□□□□□ -1.52
USP44-208ENST00000552440 S100BP04271 92 aaPredicted RBP5.56□□□□□ -1.52
USP44-208ENST00000552440 CTSHP09668 335 aa5.56□□□□□ -1.52
USP44-208ENST00000552440 PAX3P23760 479 aa5.56□□□□□ -1.52
USP44-208ENST00000552440 TNNI2P48788 182 aa5.56□□□□□ -1.52
USP44-208ENST00000552440 TBX4P57082 545 aa5.56□□□□□ -1.52
USP44-208ENST00000552440 CSRNP1Q96S65 589 aa5.56□□□□□ -1.52
USP44-208ENST00000552440 G3BP2Q9UN86 482 aaKnown RBP5.56□□□□□ -1.52
USP44-208ENST00000552440 TIAF1O95411 115 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 CYP11A1P05108 521 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 FOSL1P15407 271 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 ZFYVE27Q5T4F4 411 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 ADAMTSL4Q6UY14 1074 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 TSHZ1Q6ZSZ6 1077 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 VN1R5Q7Z5H4 357 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 CRELD1Q96HD1 420 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 PKNOX2Q96KN3 472 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 MFSD14AQ96MC6 490 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 ZKSCAN3Q9BRR0 538 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 CHRDQ9H2X0 955 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 DDX56Q9NY93 547 aaKnown RBP5.55□□□□□ -1.52
USP44-208ENST00000552440 EPB41L3Q9Y2J2 1087 aaPredicted RBP5.55□□□□□ -1.52
USP44-208ENST00000552440 AK5Q9Y6K8 562 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 ARID5AQ03989 594 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 ORC1Q13415 861 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 MAP7Q14244 749 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 C4orf46Q504U0 113 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 DUSP27Q5VZP5 1158 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 ASAP3Q8TDY4 903 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 STAG1Q8WVM7 1258 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 FRMD6Q96NE9 622 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 MAF1Q9H063 256 aa5.55□□□□□ -1.52
USP44-208ENST00000552440 LOC100289279A0A1B0GTE1 492 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms