RNA–Protein interactions for RNA: ENST00000552197.5

SLC38A1-210, Transcript of solute carrier family 38 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC38A1, Length 2,599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC38A1-210ENST00000552197 STAG1Q8WVM7 1258 aa13.03□□□□□ -0.32
SLC38A1-210ENST00000552197 TNPO1Q92973 898 aaKnown RBP13.03□□□□□ -0.32
SLC38A1-210ENST00000552197 AGXT2Q9BYV1 514 aa13.03□□□□□ -0.32
SLC38A1-210ENST00000552197 DAGLAQ9Y4D2 1042 aa13.03□□□□□ -0.32
SLC38A1-210ENST00000552197 STRIP1Q5VSL9 837 aa13.02□□□□□ -0.32
SLC38A1-210ENST00000552197 RAB11FIP4Q86YS3 637 aa13.02□□□□□ -0.32
SLC38A1-210ENST00000552197 TEX11Q8IYF3 940 aa13.02□□□□□ -0.32
SLC38A1-210ENST00000552197 LARGE2Q8N3Y3 721 aa13.02□□□□□ -0.32
SLC38A1-210ENST00000552197 ZKSCAN3Q9BRR0 538 aa13.02□□□□□ -0.32
SLC38A1-210ENST00000552197 KRT23Q9C075 422 aa13.02□□□□□ -0.32
SLC38A1-210ENST00000552197 CNNM2Q9H8M5 875 aa13.02□□□□□ -0.32
SLC38A1-210ENST00000552197 USP17L3A6NCW0 530 aa13.02□□□□□ -0.33
SLC38A1-210ENST00000552197 USP17L4A6NCW7 530 aa13.02□□□□□ -0.33
SLC38A1-210ENST00000552197 YDJCA8MPS7 323 aa13.02□□□□□ -0.33
SLC38A1-210ENST00000552197 GJB2P29033 226 aa13.02□□□□□ -0.33
SLC38A1-210ENST00000552197 NUCB2P80303 420 aa13.02□□□□□ -0.33
SLC38A1-210ENST00000552197 DACT2Q5SW24 774 aa13.02□□□□□ -0.33
SLC38A1-210ENST00000552197 USP17L1Q7RTZ2 530 aa13.02□□□□□ -0.33
SLC38A1-210ENST00000552197 RNF41Q9H4P4 317 aaPredicted RBP13.02□□□□□ -0.33
SLC38A1-210ENST00000552197 SAP30BPQ9UHR5 308 aaKnown RBP13.02□□□□□ -0.33
SLC38A1-210ENST00000552197 BCS1LQ9Y276 419 aa13.02□□□□□ -0.33
SLC38A1-210ENST00000552197 SUGT1Q9Y2Z0 365 aa13.02□□□□□ -0.33
SLC38A1-210ENST00000552197 SCRN1Q12765 414 aa13.01□□□□□ -0.33
SLC38A1-210ENST00000552197 GRIPAP1Q4V328 841 aa13.01□□□□□ -0.33
SLC38A1-210ENST00000552197 FAM163AQ96GL9 167 aaPredicted RBP13.01□□□□□ -0.33
SLC38A1-210ENST00000552197 PSMD1Q99460 953 aa13.01□□□□□ -0.33
SLC38A1-210ENST00000552197 ANAPC4Q9UJX5 808 aa13.01□□□□□ -0.33
SLC38A1-210ENST00000552197 GAKO14976 1311 aa13.01□□□□□ -0.33
SLC38A1-210ENST00000552197 KLF18A0A0U1RQI7 1052 aa13.01□□□□□ -0.33
SLC38A1-210ENST00000552197 PDIA3P30101 505 aaKnown RBP13.01□□□□□ -0.33
SLC38A1-210ENST00000552197 GTF3C6Q969F1 213 aa13.01□□□□□ -0.33
SLC38A1-210ENST00000552197 SENP2Q9HC62 589 aa13.01□□□□□ -0.33
SLC38A1-210ENST00000552197 NCOA5Q9HCD5 579 aaKnown RBP13.01□□□□□ -0.33
SLC38A1-210ENST00000552197 ARPP21Q9UBL0 812 aaPredicted RBP13.01□□□□□ -0.33
SLC38A1-210ENST00000552197 BRPF3Q9ULD4 1205 aa13.01□□□□□ -0.33
SLC38A1-210ENST00000552197 ADAMTSL1Q8N6G6 1762 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 RANBP6O60518 1105 aaKnown RBP13□□□□□ -0.33
SLC38A1-210ENST00000552197 PPFIA3O75145 1194 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 RBM5P52756 815 aaKnown RBP eCLIP13□□□□□ -0.33
SLC38A1-210ENST00000552197 RHBDL3P58872 404 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 ANP32EQ9BTT0 268 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 MKRN1Q9UHC7 482 aaKnown RBP13□□□□□ -0.33
SLC38A1-210ENST00000552197 ANGEL1Q9UNK9 670 aaKnown RBP13□□□□□ -0.33
SLC38A1-210ENST00000552197 CD2APQ9Y5K6 639 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 CDK5RAP2Q96SN8 1893 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 TIAM2Q8IVF5 1701 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 IFIT3O14879 490 aaKnown RBP13□□□□□ -0.33
SLC38A1-210ENST00000552197 RAD17O75943 681 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 PICALMQ13492 652 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 TMEM67Q5HYA8 995 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 SOGA3Q5TF21 947 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 NLGN2Q8NFZ4 835 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 TEKT1Q969V4 418 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 ZDHHC9Q9Y397 364 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 PCDHAC2Q9Y5I4 1007 aa13□□□□□ -0.33
SLC38A1-210ENST00000552197 WDR19Q8NEZ3 1342 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 SH2B2O14492 632 aaPredicted RBP12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 PFKFB2O60825 505 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 POLR3DP05423 398 aaPredicted RBP12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 PLCG2P16885 1265 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 CRKP46108 304 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 FBXL16Q8N461 479 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 IGDCC4Q8TDY8 1250 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 ZNF274Q96GC6 653 aaPredicted RBP12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 JAK2O60674 1132 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 RXRAP19793 462 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 PLCD1P51178 756 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 SBK1Q52WX2 424 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 NFXL1Q6ZNB6 911 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 ESR2Q92731 530 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 DYNLL2Q96FJ2 89 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 TMEM87BQ96K49 555 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 USP40Q9NVE5 1235 aa12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 BRCA1P38398 1863 aaKnown RBP12.99□□□□□ -0.33
SLC38A1-210ENST00000552197 GOLGA8BA8MQT2 603 aa12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 SLC3A2P08195 630 aaKnown RBP12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 C12orf60Q5U649 245 aa12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 CERS3Q8IU89 383 aa12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 AMOTL1Q8IY63 956 aa12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 DDX11Q96FC9 970 aa12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 COL4A5P29400 1685 aa12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 NAV1Q8NEY1 1877 aa12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 FLT1P17948 1338 aa12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 LAMB1P07942 1786 aa12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 SYT1P21579 422 aa12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 IARSP41252 1262 aaKnown RBP12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 HHIPL2Q6UWX4 724 aa12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 TAOK3Q9H2K8 898 aa12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 LY9Q9HBG7 655 aa12.98□□□□□ -0.33
SLC38A1-210ENST00000552197 ERICH2A1L162 156 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 EVCP57679 992 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 SART3Q15020 963 aaKnown RBP12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 FAM47AQ5JRC9 791 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 APOBEC3HQ6NTF7 200 aaKnown RBP12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 CCDC144CPQ8IYA2 1237 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 UBAC1Q9BSL1 405 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 MYL10Q9BUA6 226 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 MYH1P12882 1939 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 PSMD14O00487 310 aa12.97□□□□□ -0.33
SLC38A1-210ENST00000552197 FKBP1AP62942 108 aaKnown RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms